RNA–Protein interactions for RNA: ENST00000488834.5

SSR1-209, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-209ENST00000488834 GLB1LQ6UWU2 654 aa5.55□□□□□ -1.52
SSR1-209ENST00000488834 AFAP1L2Q8N4X5 818 aa5.55□□□□□ -1.52
SSR1-209ENST00000488834 DYDC2Q96IM9 177 aa5.55□□□□□ -1.52
SSR1-209ENST00000488834 MS4A5Q9H3V2 200 aa5.55□□□□□ -1.52
SSR1-209ENST00000488834 NPEPPSL1A6NEC2 478 aa5.54□□□□□ -1.52
SSR1-209ENST00000488834 H2AFYO75367 372 aaKnown RBP5.54□□□□□ -1.52
SSR1-209ENST00000488834 PCDH8O95206 1070 aa5.54□□□□□ -1.52
SSR1-209ENST00000488834 PLATP00750 562 aa5.54□□□□□ -1.52
SSR1-209ENST00000488834 SESN2P58004 480 aaPredicted RBP5.54□□□□□ -1.52
SSR1-209ENST00000488834 RAC3P60763 192 aa5.54□□□□□ -1.52
SSR1-209ENST00000488834 STAT4Q14765 748 aa5.54□□□□□ -1.52
SSR1-209ENST00000488834 WDR66Q8TBY9 1149 aa5.54□□□□□ -1.52
SSR1-209ENST00000488834 ZNF496Q96IT1 587 aaPredicted RBP5.54□□□□□ -1.52
SSR1-209ENST00000488834 HIST1H2AHQ96KK5 128 aa5.54□□□□□ -1.52
SSR1-209ENST00000488834 LRRC37BQ96QE4 947 aa5.54□□□□□ -1.52
SSR1-209ENST00000488834 LMF1Q96S06 567 aa5.54□□□□□ -1.52
SSR1-209ENST00000488834 HIST1H2AJQ99878 128 aa5.54□□□□□ -1.52
SSR1-209ENST00000488834 NOL10Q9BSC4 688 aaKnown RBP5.54□□□□□ -1.52
SSR1-209ENST00000488834 OR10A2Q9H208 303 aa5.54□□□□□ -1.52
SSR1-209ENST00000488834 C12orf65Q9H3J6 166 aaKnown RBP5.54□□□□□ -1.52
SSR1-209ENST00000488834 POLR3BQ9NW08 1133 aaPredicted RBP5.54□□□□□ -1.52
SSR1-209ENST00000488834 DENND2AQ9ULE3 1009 aa5.54□□□□□ -1.52
SSR1-209ENST00000488834 SLC4A7Q9Y6M7 1214 aa5.54□□□□□ -1.52
SSR1-209ENST00000488834 LCHNA4D1U4 455 aa5.53□□□□□ -1.52
SSR1-209ENST00000488834 MAFO75444 373 aaPredicted RBP5.53□□□□□ -1.52
SSR1-209ENST00000488834 CELA3BP08861 270 aa5.53□□□□□ -1.52
SSR1-209ENST00000488834 CANXP27824 592 aaKnown RBP5.53□□□□□ -1.52
SSR1-209ENST00000488834 TBC1D10BQ4KMP7 808 aaPredicted RBP5.53□□□□□ -1.52
SSR1-209ENST00000488834 AGBL4Q5VU57 503 aa5.53□□□□□ -1.52
SSR1-209ENST00000488834 SLFN13Q68D06 897 aa5.53□□□□□ -1.52
SSR1-209ENST00000488834 KLHDC10Q6PID8 442 aa5.53□□□□□ -1.52
SSR1-209ENST00000488834 ZNF662Q6ZS27 426 aa5.53□□□□□ -1.52
SSR1-209ENST00000488834 USP30Q70CQ3 517 aa5.53□□□□□ -1.52
SSR1-209ENST00000488834 LARP4Q71RC2 724 aaKnown RBP eCLIP5.53□□□□□ -1.52
SSR1-209ENST00000488834 BMP8AQ7Z5Y6 402 aa5.53□□□□□ -1.52
SSR1-209ENST00000488834 RASSF3Q86WH2 238 aa5.53□□□□□ -1.52
SSR1-209ENST00000488834 GIMAP8Q8ND71 665 aaPredicted RBP5.53□□□□□ -1.52
SSR1-209ENST00000488834 OR14K1Q8NGZ2 314 aa5.53□□□□□ -1.52
SSR1-209ENST00000488834 GCDHQ92947 438 aaPredicted RBP5.53□□□□□ -1.52
SSR1-209ENST00000488834 GFM2Q969S9 779 aaKnown RBP5.53□□□□□ -1.52
SSR1-209ENST00000488834 WDR92Q96MX6 357 aa5.53□□□□□ -1.52
SSR1-209ENST00000488834 ANO3Q9BYT9 981 aa5.53□□□□□ -1.52
SSR1-209ENST00000488834 PUF60Q9UHX1 559 aaKnown RBP5.53□□□□□ -1.52
SSR1-209ENST00000488834 DNAI1Q9UI46 699 aa5.53□□□□□ -1.52
SSR1-209ENST00000488834 USP18Q9UMW8 372 aa5.53□□□□□ -1.52
SSR1-209ENST00000488834 DAPK3O43293 454 aa5.52□□□□□ -1.53
SSR1-209ENST00000488834 FOXD2O60548 495 aaPredicted RBP5.52□□□□□ -1.53
SSR1-209ENST00000488834 OPHN1O60890 802 aa5.52□□□□□ -1.53
SSR1-209ENST00000488834 SYN1P17600 705 aa5.52□□□□□ -1.53
SSR1-209ENST00000488834 XPAP23025 273 aaPredicted RBP5.52□□□□□ -1.53
SSR1-209ENST00000488834 ADAM15Q13444 863 aa5.52□□□□□ -1.53
SSR1-209ENST00000488834 TRIM68Q6AZZ1 485 aa5.52□□□□□ -1.53
SSR1-209ENST00000488834 CCDC62Q6P9F0 684 aa5.52□□□□□ -1.53
SSR1-209ENST00000488834 UNQ6494/PRO21346Q6UXR6 183 aa5.52□□□□□ -1.53
SSR1-209ENST00000488834 CXorf67Q86X51 503 aaPredicted RBP5.52□□□□□ -1.53
SSR1-209ENST00000488834 CIR1Q86X95 450 aaPredicted RBP5.52□□□□□ -1.53
SSR1-209ENST00000488834 SPATS2Q86XZ4 545 aaKnown RBP5.52□□□□□ -1.53
SSR1-209ENST00000488834 CXorf38Q8TB03 319 aa5.52□□□□□ -1.53
SSR1-209ENST00000488834 SEMA4AQ9H3S1 761 aa5.52□□□□□ -1.53
SSR1-209ENST00000488834 VWA7Q9Y334 891 aa5.52□□□□□ -1.53
SSR1-209ENST00000488834 RBM8AQ9Y5S9 174 aaKnown RBP5.52□□□□□ -1.53
SSR1-209ENST00000488834 MYPNQ86TC9 1320 aa5.51□□□□□ -1.53
SSR1-209ENST00000488834 GOLGA8BA8MQT2 603 aa5.51□□□□□ -1.53
SSR1-209ENST00000488834 K7ESM1 405 aa5.51□□□□□ -1.53
SSR1-209ENST00000488834 ELL2O00472 640 aaPredicted RBP5.51□□□□□ -1.53
SSR1-209ENST00000488834 ARHGAP6O43182 974 aa5.51□□□□□ -1.53
SSR1-209ENST00000488834 CDC14BO60729 498 aa5.51□□□□□ -1.53
SSR1-209ENST00000488834 CNOT4O95628 575 aaKnown RBP5.51□□□□□ -1.53
SSR1-209ENST00000488834 CLEC2LP0C7M8 214 aa5.51□□□□□ -1.53
SSR1-209ENST00000488834 EPHB4P54760 987 aa5.51□□□□□ -1.53
SSR1-209ENST00000488834 KRTAP10-2P60368 255 aa5.51□□□□□ -1.53
SSR1-209ENST00000488834 FAPQ12884 760 aa5.51□□□□□ -1.53
SSR1-209ENST00000488834 RNF151Q2KHN1 245 aa5.51□□□□□ -1.53
SSR1-209ENST00000488834 RNF219Q5W0B1 726 aaPredicted RBP5.51□□□□□ -1.53
SSR1-209ENST00000488834 KANSL1Q7Z3B3 1105 aa5.51□□□□□ -1.53
SSR1-209ENST00000488834 LIMS2Q7Z4I7 341 aa5.51□□□□□ -1.53
SSR1-209ENST00000488834 CLRN3Q8NCR9 226 aa5.51□□□□□ -1.53
SSR1-209ENST00000488834 NEIL1Q96FI4 390 aaPredicted RBP5.51□□□□□ -1.53
SSR1-209ENST00000488834 LOXL4Q96JB6 756 aa5.51□□□□□ -1.53
SSR1-209ENST00000488834 SEC61A2Q9H9S3 476 aa5.51□□□□□ -1.53
SSR1-209ENST00000488834 PCDHB6Q9Y5E3 794 aa5.51□□□□□ -1.53
SSR1-209ENST00000488834 A0A0A6YYJ9 748 aa5.5□□□□□ -1.53
SSR1-209ENST00000488834 PRSS38A1L453 326 aa5.5□□□□□ -1.53
SSR1-209ENST00000488834 ANKRD62A6NC57 917 aa5.5□□□□□ -1.53
SSR1-209ENST00000488834 GOLGA8AA7E2F4 631 aa5.5□□□□□ -1.53
SSR1-209ENST00000488834 GPR39O43194 453 aa5.5□□□□□ -1.53
SSR1-209ENST00000488834 NRP2O60462 931 aa5.5□□□□□ -1.53
SSR1-209ENST00000488834 ANTXR2P58335 489 aa5.5□□□□□ -1.53
SSR1-209ENST00000488834 PPARAQ07869 468 aa5.5□□□□□ -1.53
SSR1-209ENST00000488834 MAN2A1Q16706 1144 aa5.5□□□□□ -1.53
SSR1-209ENST00000488834 ZBTB41Q5SVQ8 909 aa5.5□□□□□ -1.53
SSR1-209ENST00000488834 KRT40Q6A162 431 aa5.5□□□□□ -1.53
SSR1-209ENST00000488834 CDYL2Q8N8U2 506 aa5.5□□□□□ -1.53
SSR1-209ENST00000488834 CHST13Q8NET6 341 aa5.5□□□□□ -1.53
SSR1-209ENST00000488834 ZCRB1Q8TBF4 217 aaKnown RBP5.5□□□□□ -1.53
SSR1-209ENST00000488834 LPPQ93052 612 aa5.5□□□□□ -1.53
SSR1-209ENST00000488834 ACAP3Q96P50 834 aa5.5□□□□□ -1.53
SSR1-209ENST00000488834 PTPN18Q99952 460 aa5.5□□□□□ -1.53
SSR1-209ENST00000488834 KRTAP9-3Q9BYQ3 159 aa5.5□□□□□ -1.53
SSR1-209ENST00000488834 PITHD1Q9GZP4 211 aaPredicted RBP5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms