RNA–Protein interactions for RNA: ENST00000488017.1

SMC4-220, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-220ENST00000488017 SCDO00767 359 aa5.44□□□□□ -1.54
SMC4-220ENST00000488017 FAM20BO75063 409 aa5.44□□□□□ -1.54
SMC4-220ENST00000488017 C6orf222P0C671 652 aaPredicted RBP5.44□□□□□ -1.54
SMC4-220ENST00000488017 DNM2P50570 870 aa5.44□□□□□ -1.54
SMC4-220ENST00000488017 C21orf58P58505 322 aa5.44□□□□□ -1.54
SMC4-220ENST00000488017 GABREP78334 506 aa5.44□□□□□ -1.54
SMC4-220ENST00000488017 ZKSCAN2Q63HK3 967 aa5.44□□□□□ -1.54
SMC4-220ENST00000488017 MFSD5Q6N075 450 aa5.44□□□□□ -1.54
SMC4-220ENST00000488017 VRK3Q8IV63 474 aa5.44□□□□□ -1.54
SMC4-220ENST00000488017 TCF25Q9BQ70 676 aa5.44□□□□□ -1.54
SMC4-220ENST00000488017 TRBV23-1A0A0A0MS06 115 aa5.43□□□□□ -1.54
SMC4-220ENST00000488017 UBE2QL1A1L167 161 aa5.43□□□□□ -1.54
SMC4-220ENST00000488017 ZBTB7CA1YPR0 619 aa5.43□□□□□ -1.54
SMC4-220ENST00000488017 ZAR1LA6NP61 321 aa5.43□□□□□ -1.54
SMC4-220ENST00000488017 MASP2O00187 686 aa5.43□□□□□ -1.54
SMC4-220ENST00000488017 ITGB1P05556 798 aa5.43□□□□□ -1.54
SMC4-220ENST00000488017 BPIFB4P59827 614 aa5.43□□□□□ -1.54
SMC4-220ENST00000488017 FKBP15Q5T1M5 1219 aa5.43□□□□□ -1.54
SMC4-220ENST00000488017 ZC3H7AQ8IWR0 971 aaKnown RBP5.43□□□□□ -1.54
SMC4-220ENST00000488017 ANKRD53Q8N9V6 530 aa5.43□□□□□ -1.54
SMC4-220ENST00000488017 PROKR1Q8TCW9 393 aa5.43□□□□□ -1.54
SMC4-220ENST00000488017 NTN5Q8WTR8 489 aaPredicted RBP5.43□□□□□ -1.54
SMC4-220ENST00000488017 DLG3Q92796 817 aa5.43□□□□□ -1.54
SMC4-220ENST00000488017 RPL10LQ96L21 214 aaKnown RBP5.43□□□□□ -1.54
SMC4-220ENST00000488017 IPO9Q96P70 1041 aaKnown RBP5.43□□□□□ -1.54
SMC4-220ENST00000488017 MNTQ99583 582 aa5.43□□□□□ -1.54
SMC4-220ENST00000488017 CDC6Q99741 560 aa5.43□□□□□ -1.54
SMC4-220ENST00000488017 DENND2AQ9ULE3 1009 aa5.43□□□□□ -1.54
SMC4-220ENST00000488017 B3GALT1Q9Y5Z6 326 aa5.43□□□□□ -1.54
SMC4-220ENST00000488017 GRID2IPA4D2P6 1211 aa5.42□□□□□ -1.54
SMC4-220ENST00000488017 C2orf78A6NCI8 922 aa5.42□□□□□ -1.54
SMC4-220ENST00000488017 RASSF10A6NK89 507 aa5.42□□□□□ -1.54
SMC4-220ENST00000488017 GOLGA8BA8MQT2 603 aa5.42□□□□□ -1.54
SMC4-220ENST00000488017 MFAP3LO75121 409 aa5.42□□□□□ -1.54
SMC4-220ENST00000488017 ABHD16AO95870 558 aa5.42□□□□□ -1.54
SMC4-220ENST00000488017 ALDH6A1Q02252 535 aaKnown RBP5.42□□□□□ -1.54
SMC4-220ENST00000488017 TCIRG1Q13488 830 aa5.42□□□□□ -1.54
SMC4-220ENST00000488017 ACAP1Q15027 740 aa5.42□□□□□ -1.54
SMC4-220ENST00000488017 TM4SF20Q53R12 229 aa5.42□□□□□ -1.54
SMC4-220ENST00000488017 NAIF1Q69YI7 327 aaPredicted RBP5.42□□□□□ -1.54
SMC4-220ENST00000488017 LRRC55Q6ZSA7 311 aa5.42□□□□□ -1.54
SMC4-220ENST00000488017 ADGRG3Q86Y34 549 aa5.42□□□□□ -1.54
SMC4-220ENST00000488017 FOXB1Q99853 325 aa5.42□□□□□ -1.54
SMC4-220ENST00000488017 MLST8Q9BVC4 326 aa5.42□□□□□ -1.54
SMC4-220ENST00000488017 TOR3AQ9H497 397 aa5.42□□□□□ -1.54
SMC4-220ENST00000488017 IL23AQ9NPF7 189 aa5.42□□□□□ -1.54
SMC4-220ENST00000488017 ADARB2Q9NS39 739 aaKnown RBP5.42□□□□□ -1.54
SMC4-220ENST00000488017 PCDHA9Q9Y5H5 950 aa5.42□□□□□ -1.54
SMC4-220ENST00000488017 RBM8AQ9Y5S9 174 aaKnown RBP5.42□□□□□ -1.54
SMC4-220ENST00000488017 INO80B-WBP1J3KQ70 363 aa5.41□□□□□ -1.54
SMC4-220ENST00000488017 B3GALT2O43825 422 aa5.41□□□□□ -1.54
SMC4-220ENST00000488017 ADCY3O60266 1144 aa5.41□□□□□ -1.54
SMC4-220ENST00000488017 IPO13O94829 963 aaKnown RBP5.41□□□□□ -1.54
SMC4-220ENST00000488017 CD38P28907 300 aa5.41□□□□□ -1.54
SMC4-220ENST00000488017 TAP1Q03518 808 aa5.41□□□□□ -1.54
SMC4-220ENST00000488017 MDGA1Q8NFP4 955 aa5.41□□□□□ -1.54
SMC4-220ENST00000488017 ATXN2LQ8WWM7 1075 aaKnown RBP5.41□□□□□ -1.54
SMC4-220ENST00000488017 BBC3Q96PG8 261 aaPredicted RBP5.41□□□□□ -1.54
SMC4-220ENST00000488017 INO80BQ9C086 356 aaPredicted RBP5.41□□□□□ -1.54
SMC4-220ENST00000488017 HS3ST4Q9Y661 456 aa5.41□□□□□ -1.54
SMC4-220ENST00000488017 A0A0A6YYK5 440 aaPredicted RBP5.4□□□□□ -1.54
SMC4-220ENST00000488017 GRXCR1A8MXD5 290 aa5.4□□□□□ -1.54
SMC4-220ENST00000488017 CRTAMO95727 393 aa5.4□□□□□ -1.54
SMC4-220ENST00000488017 VSIG10L2P0DP72 767 aa5.4□□□□□ -1.54
SMC4-220ENST00000488017 RAB33AQ14088 237 aa5.4□□□□□ -1.54
SMC4-220ENST00000488017 COLEC12Q5KU26 742 aa5.4□□□□□ -1.54
SMC4-220ENST00000488017 STRIP1Q5VSL9 837 aa5.4□□□□□ -1.54
SMC4-220ENST00000488017 C1QL3Q5VWW1 255 aa5.4□□□□□ -1.54
SMC4-220ENST00000488017 KCNV1Q6PIU1 500 aa5.4□□□□□ -1.54
SMC4-220ENST00000488017 CISD2Q8N5K1 135 aaKnown RBP5.4□□□□□ -1.54
SMC4-220ENST00000488017 NKD2Q969F2 451 aaPredicted RBP5.4□□□□□ -1.54
SMC4-220ENST00000488017 E2F7Q96AV8 911 aa5.4□□□□□ -1.54
SMC4-220ENST00000488017 TINF2Q9BSI4 451 aa5.4□□□□□ -1.54
SMC4-220ENST00000488017 UNCXA6NJT0 531 aa5.39□□□□□ -1.55
SMC4-220ENST00000488017 APPP05067 770 aa5.39□□□□□ -1.55
SMC4-220ENST00000488017 NR4A1P22736 598 aa5.39□□□□□ -1.55
SMC4-220ENST00000488017 DGKDQ16760 1214 aa5.39□□□□□ -1.55
SMC4-220ENST00000488017 DCAF17Q5H9S7 520 aaPredicted RBP5.39□□□□□ -1.55
SMC4-220ENST00000488017 CATSPEREQ5SY80 951 aa5.39□□□□□ -1.55
SMC4-220ENST00000488017 HECTD2Q5U5R9 776 aa5.39□□□□□ -1.55
SMC4-220ENST00000488017 RTN4RL1Q86UN2 441 aaPredicted RBP5.39□□□□□ -1.55
SMC4-220ENST00000488017 ELOA2Q8IYF1 753 aaPredicted RBP5.39□□□□□ -1.55
SMC4-220ENST00000488017 ZBTB38Q8NAP3 1195 aaPredicted RBP5.39□□□□□ -1.55
SMC4-220ENST00000488017 PLA2G15Q8NCC3 412 aa5.39□□□□□ -1.55
SMC4-220ENST00000488017 FOXRED1Q96CU9 486 aaPredicted RBP5.39□□□□□ -1.55
SMC4-220ENST00000488017 CELF4Q9BZC1 486 aaKnown RBP5.39□□□□□ -1.55
SMC4-220ENST00000488017 RCAN3Q9UKA8 241 aa5.39□□□□□ -1.55
SMC4-220ENST00000488017 COL4A3Q01955 1670 aa5.39□□□□□ -1.55
SMC4-220ENST00000488017 SLC12A8A0AV02 714 aa5.38□□□□□ -1.55
SMC4-220ENST00000488017 HIP1RO75146 1068 aa5.38□□□□□ -1.55
SMC4-220ENST00000488017 JUNP05412 331 aaKnown RBP5.38□□□□□ -1.55
SMC4-220ENST00000488017 TMEM132BQ14DG7 1078 aa5.38□□□□□ -1.55
SMC4-220ENST00000488017 PLEKHG4Q58EX7 1191 aa5.38□□□□□ -1.55
SMC4-220ENST00000488017 FAM209AQ5JX71 171 aa5.38□□□□□ -1.55
SMC4-220ENST00000488017 FSTL4Q6MZW2 842 aa5.38□□□□□ -1.55
SMC4-220ENST00000488017 CLEC14AQ86T13 490 aa5.38□□□□□ -1.55
SMC4-220ENST00000488017 OR5AN1Q8NGI8 311 aa5.38□□□□□ -1.55
SMC4-220ENST00000488017 ZNF512Q96ME7 567 aaPredicted RBP5.38□□□□□ -1.55
SMC4-220ENST00000488017 OLFML1Q6UWY5 402 aa5.37□□□□□ -1.55
SMC4-220ENST00000488017 SPATC1Q76KD6 591 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms