RNA–Protein interactions for RNA: ENST00000487711.5

TTC3-220, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-220ENST00000487711 KCNG1Q9UIX4 513 aa5.65□□□□□ -1.5
TTC3-220ENST00000487711 MCM8Q9UJA3 840 aa5.65□□□□□ -1.5
TTC3-220ENST00000487711 SYNPO2Q9UMS6 1093 aa5.65□□□□□ -1.5
TTC3-220ENST00000487711 ELL2O00472 640 aaPredicted RBP5.64□□□□□ -1.51
TTC3-220ENST00000487711 PCDH8O95206 1070 aa5.64□□□□□ -1.51
TTC3-220ENST00000487711 CANXP27824 592 aaKnown RBP5.64□□□□□ -1.51
TTC3-220ENST00000487711 TRIM68Q6AZZ1 485 aa5.64□□□□□ -1.51
TTC3-220ENST00000487711 LHFPL2Q6ZUX7 228 aa5.64□□□□□ -1.51
TTC3-220ENST00000487711 BMP8AQ7Z5Y6 402 aa5.64□□□□□ -1.51
TTC3-220ENST00000487711 CXorf67Q86X51 503 aaPredicted RBP5.64□□□□□ -1.51
TTC3-220ENST00000487711 FAM177A1Q8N128 213 aaPredicted RBP5.64□□□□□ -1.51
TTC3-220ENST00000487711 RELTQ969Z4 430 aa5.64□□□□□ -1.51
TTC3-220ENST00000487711 DYDC2Q96IM9 177 aa5.64□□□□□ -1.51
TTC3-220ENST00000487711 ANO3Q9BYT9 981 aa5.64□□□□□ -1.51
TTC3-220ENST00000487711 DENND2AQ9ULE3 1009 aa5.64□□□□□ -1.51
TTC3-220ENST00000487711 NR2E1Q9Y466 385 aa5.64□□□□□ -1.51
TTC3-220ENST00000487711 SLC4A7Q9Y6M7 1214 aa5.64□□□□□ -1.51
TTC3-220ENST00000487711 GPR39O43194 453 aa5.63□□□□□ -1.51
TTC3-220ENST00000487711 OPHN1O60890 802 aa5.63□□□□□ -1.51
TTC3-220ENST00000487711 CNOT4O95628 575 aaKnown RBP5.63□□□□□ -1.51
TTC3-220ENST00000487711 PLATP00750 562 aa5.63□□□□□ -1.51
TTC3-220ENST00000487711 POU3F3P20264 500 aaPredicted RBP5.63□□□□□ -1.51
TTC3-220ENST00000487711 ANTXR2P58335 489 aa5.63□□□□□ -1.51
TTC3-220ENST00000487711 ZNF827Q17R98 1081 aa5.63□□□□□ -1.51
TTC3-220ENST00000487711 TBC1D10BQ4KMP7 808 aaPredicted RBP5.63□□□□□ -1.51
TTC3-220ENST00000487711 ZBTB41Q5SVQ8 909 aa5.63□□□□□ -1.51
TTC3-220ENST00000487711 AGBL4Q5VU57 503 aa5.63□□□□□ -1.51
TTC3-220ENST00000487711 LILRA6Q6PI73 481 aa5.63□□□□□ -1.51
TTC3-220ENST00000487711 KLHDC10Q6PID8 442 aa5.63□□□□□ -1.51
TTC3-220ENST00000487711 BCL6BQ8N143 479 aaPredicted RBP5.63□□□□□ -1.51
TTC3-220ENST00000487711 NOL10Q9BSC4 688 aaKnown RBP5.63□□□□□ -1.51
TTC3-220ENST00000487711 BDH2Q9BUT1 245 aa5.63□□□□□ -1.51
TTC3-220ENST00000487711 OR10A2Q9H208 303 aa5.63□□□□□ -1.51
TTC3-220ENST00000487711 TOPORSQ9NS56 1045 aaPredicted RBP5.63□□□□□ -1.51
TTC3-220ENST00000487711 POLR3BQ9NW08 1133 aaPredicted RBP5.63□□□□□ -1.51
TTC3-220ENST00000487711 ATP8A1Q9Y2Q0 1164 aa5.63□□□□□ -1.51
TTC3-220ENST00000487711 VWA7Q9Y334 891 aa5.63□□□□□ -1.51
TTC3-220ENST00000487711 MYPNQ86TC9 1320 aa5.63□□□□□ -1.51
TTC3-220ENST00000487711 A0A0A6YYJ9 748 aa5.62□□□□□ -1.51
TTC3-220ENST00000487711 PRSS38A1L453 326 aa5.62□□□□□ -1.51
TTC3-220ENST00000487711 NPEPPSL1A6NEC2 478 aa5.62□□□□□ -1.51
TTC3-220ENST00000487711 H2AFYO75367 372 aaKnown RBP5.62□□□□□ -1.51
TTC3-220ENST00000487711 CLEC2LP0C7M8 214 aa5.62□□□□□ -1.51
TTC3-220ENST00000487711 SESN2P58004 480 aaPredicted RBP5.62□□□□□ -1.51
TTC3-220ENST00000487711 RAC3P60763 192 aa5.62□□□□□ -1.51
TTC3-220ENST00000487711 ADAM15Q13444 863 aa5.62□□□□□ -1.51
TTC3-220ENST00000487711 RNF151Q2KHN1 245 aa5.62□□□□□ -1.51
TTC3-220ENST00000487711 RNF219Q5W0B1 726 aaPredicted RBP5.62□□□□□ -1.51
TTC3-220ENST00000487711 CCDC62Q6P9F0 684 aa5.62□□□□□ -1.51
TTC3-220ENST00000487711 GLB1LQ6UWU2 654 aa5.62□□□□□ -1.51
TTC3-220ENST00000487711 USP30Q70CQ3 517 aa5.62□□□□□ -1.51
TTC3-220ENST00000487711 DDX42Q86XP3 938 aaKnown RBP eCLIP5.62□□□□□ -1.51
TTC3-220ENST00000487711 SPATS2Q86XZ4 545 aaKnown RBP5.62□□□□□ -1.51
TTC3-220ENST00000487711 GFM2Q969S9 779 aaKnown RBP5.62□□□□□ -1.51
TTC3-220ENST00000487711 HIST1H2AHQ96KK5 128 aa5.62□□□□□ -1.51
TTC3-220ENST00000487711 WDR92Q96MX6 357 aa5.62□□□□□ -1.51
TTC3-220ENST00000487711 LRRC37BQ96QE4 947 aa5.62□□□□□ -1.51
TTC3-220ENST00000487711 LMF1Q96S06 567 aa5.62□□□□□ -1.51
TTC3-220ENST00000487711 HIST1H2AJQ99878 128 aa5.62□□□□□ -1.51
TTC3-220ENST00000487711 PITHD1Q9GZP4 211 aaPredicted RBP5.62□□□□□ -1.51
TTC3-220ENST00000487711 DNAI1Q9UI46 699 aa5.62□□□□□ -1.51
TTC3-220ENST00000487711 USP18Q9UMW8 372 aa5.62□□□□□ -1.51
TTC3-220ENST00000487711 PPP2R3BQ9Y5P8 575 aa5.62□□□□□ -1.51
TTC3-220ENST00000487711 SHROOM4Q9ULL8 1493 aa5.62□□□□□ -1.51
TTC3-220ENST00000487711 LOC105371045A0A1W2PR82 267 aa5.61□□□□□ -1.51
TTC3-220ENST00000487711 ANKRD62A6NC57 917 aa5.61□□□□□ -1.51
TTC3-220ENST00000487711 ARHGAP6O43182 974 aa5.61□□□□□ -1.51
TTC3-220ENST00000487711 FOXD2O60548 495 aaPredicted RBP5.61□□□□□ -1.51
TTC3-220ENST00000487711 PFKMP08237 780 aa5.61□□□□□ -1.51
TTC3-220ENST00000487711 EPHB4P54760 987 aa5.61□□□□□ -1.51
TTC3-220ENST00000487711 MANFP55145 182 aaKnown RBP5.61□□□□□ -1.51
TTC3-220ENST00000487711 PLP2Q04941 152 aa5.61□□□□□ -1.51
TTC3-220ENST00000487711 FAPQ12884 760 aa5.61□□□□□ -1.51
TTC3-220ENST00000487711 TBR1Q16650 682 aa5.61□□□□□ -1.51
TTC3-220ENST00000487711 SLFN13Q68D06 897 aa5.61□□□□□ -1.51
TTC3-220ENST00000487711 CDYL2Q8N8U2 506 aa5.61□□□□□ -1.51
TTC3-220ENST00000487711 OR14K1Q8NGZ2 314 aa5.61□□□□□ -1.51
TTC3-220ENST00000487711 CXorf38Q8TB03 319 aa5.61□□□□□ -1.51
TTC3-220ENST00000487711 COG1Q8WTW3 980 aa5.61□□□□□ -1.51
TTC3-220ENST00000487711 NEIL1Q96FI4 390 aaPredicted RBP5.61□□□□□ -1.51
TTC3-220ENST00000487711 PTPN18Q99952 460 aa5.61□□□□□ -1.51
TTC3-220ENST00000487711 C12orf65Q9H3J6 166 aaKnown RBP5.61□□□□□ -1.51
TTC3-220ENST00000487711 SEC61A2Q9H9S3 476 aa5.61□□□□□ -1.51
TTC3-220ENST00000487711 PPP4R1LQ9P1A2 415 aa5.61□□□□□ -1.51
TTC3-220ENST00000487711 PCDHB6Q9Y5E3 794 aa5.61□□□□□ -1.51
TTC3-220ENST00000487711 SYN1P17600 705 aa5.6□□□□□ -1.51
TTC3-220ENST00000487711 NFYCQ13952 458 aa5.6□□□□□ -1.51
TTC3-220ENST00000487711 PDCD1Q15116 288 aa5.6□□□□□ -1.51
TTC3-220ENST00000487711 LIMS2Q7Z4I7 341 aa5.6□□□□□ -1.51
TTC3-220ENST00000487711 ZCRB1Q8TBF4 217 aaKnown RBP5.6□□□□□ -1.51
TTC3-220ENST00000487711 GCDHQ92947 438 aaPredicted RBP5.6□□□□□ -1.51
TTC3-220ENST00000487711 NKD2Q969F2 451 aaPredicted RBP5.6□□□□□ -1.51
TTC3-220ENST00000487711 AHCYL2Q96HN2 611 aaKnown RBP5.6□□□□□ -1.51
TTC3-220ENST00000487711 HAPLN2Q9GZV7 340 aa5.6□□□□□ -1.51
TTC3-220ENST00000487711 WNT8AQ9H1J5 351 aa5.6□□□□□ -1.51
TTC3-220ENST00000487711 VTA1Q9NP79 307 aa5.6□□□□□ -1.51
TTC3-220ENST00000487711 PUF60Q9UHX1 559 aaKnown RBP5.6□□□□□ -1.51
TTC3-220ENST00000487711 COL4A3BPQ9Y5P4 624 aa5.6□□□□□ -1.51
TTC3-220ENST00000487711 NUMBLQ9Y6R0 609 aa5.6□□□□□ -1.51
TTC3-220ENST00000487711 GOLGA8AA7E2F4 631 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms