RNA–Protein interactions for RNA: ENST00000487572.5

SEC22A-208, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 870 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-208ENST00000487572 TCTN1Q2MV58 587 aa21.77■■□□□ 1.08
SEC22A-208ENST00000487572 KSR1Q8IVT5 923 aa21.77■■□□□ 1.08
SEC22A-208ENST00000487572 TCP11Q8WWU5 503 aa21.77■■□□□ 1.08
SEC22A-208ENST00000487572 NLRP7Q8WX94 980 aa21.77■■□□□ 1.08
SEC22A-208ENST00000487572 SIP14410 1827 aa21.76■■□□□ 1.07
SEC22A-208ENST00000487572 ZBBXA8MT70 800 aa21.76■■□□□ 1.07
SEC22A-208ENST00000487572 SLC26A4O43511 780 aa21.76■■□□□ 1.07
SEC22A-208ENST00000487572 GAS2O43903 313 aaKnown RBP21.76■■□□□ 1.07
SEC22A-208ENST00000487572 CUTAO60888 179 aa21.76■■□□□ 1.07
SEC22A-208ENST00000487572 ACTN1P12814 892 aa21.76■■□□□ 1.07
SEC22A-208ENST00000487572 GPC3P51654 580 aa21.76■■□□□ 1.07
SEC22A-208ENST00000487572 CNKSR3Q6P9H4 555 aa21.76■■□□□ 1.07
SEC22A-208ENST00000487572 DBF4BQ8NFT6 615 aa21.76■■□□□ 1.07
SEC22A-208ENST00000487572 PRPF31Q8WWY3 499 aaKnown RBP21.76■■□□□ 1.07
SEC22A-208ENST00000487572 PSPC1Q8WXF1 523 aaKnown RBP21.76■■□□□ 1.07
SEC22A-208ENST00000487572 SEPT8Q92599 483 aa21.76■■□□□ 1.07
SEC22A-208ENST00000487572 SPATA32Q96LK8 384 aa21.76■■□□□ 1.07
SEC22A-208ENST00000487572 NLRP4Q96MN2 994 aa21.76■■□□□ 1.07
SEC22A-208ENST00000487572 IFIH1Q9BYX4 1025 aaKnown RBP21.76■■□□□ 1.07
SEC22A-208ENST00000487572 CCSER1Q9C0I3 900 aa21.76■■□□□ 1.07
SEC22A-208ENST00000487572 POLR3FQ9H1D9 316 aaPredicted RBP21.76■■□□□ 1.07
SEC22A-208ENST00000487572 ADAMTS10Q9H324 1103 aa21.76■■□□□ 1.07
SEC22A-208ENST00000487572 RCOR1Q9UKL0 485 aa21.76■■□□□ 1.07
SEC22A-208ENST00000487572 COL4A3BPQ9Y5P4 624 aa21.76■■□□□ 1.07
SEC22A-208ENST00000487572 CD52P31358 61 aa21.75■■□□□ 1.07
SEC22A-208ENST00000487572 CRYBB1P53674 252 aaPredicted RBP21.75■■□□□ 1.07
SEC22A-208ENST00000487572 PLEKHG4Q58EX7 1191 aa21.75■■□□□ 1.07
SEC22A-208ENST00000487572 FAM102BQ5T8I3 360 aa21.75■■□□□ 1.07
SEC22A-208ENST00000487572 TSHZ1Q6ZSZ6 1077 aa21.75■■□□□ 1.07
SEC22A-208ENST00000487572 LEO1Q8WVC0 666 aaPredicted RBP21.75■■□□□ 1.07
SEC22A-208ENST00000487572 TMEM40Q8WWA1 233 aa21.75■■□□□ 1.07
SEC22A-208ENST00000487572 AGO3Q9H9G7 860 aaKnown RBP21.75■■□□□ 1.07
SEC22A-208ENST00000487572 GPRC5CQ9NQ84 441 aa21.75■■□□□ 1.07
SEC22A-208ENST00000487572 CCDC39Q9UFE4 941 aa21.75■■□□□ 1.07
SEC22A-208ENST00000487572 CIZ1Q9ULV3 898 aaPredicted RBP21.75■■□□□ 1.07
SEC22A-208ENST00000487572 PCDHA7Q9UN72 937 aa21.75■■□□□ 1.07
SEC22A-208ENST00000487572 SRGAP2CP0DJJ0 459 aa21.74■■□□□ 1.07
SEC22A-208ENST00000487572 CYP11B2P19099 503 aa21.74■■□□□ 1.07
SEC22A-208ENST00000487572 LAMTOR4Q0VGL1 99 aa21.74■■□□□ 1.07
SEC22A-208ENST00000487572 PAK2Q13177 524 aa21.74■■□□□ 1.07
SEC22A-208ENST00000487572 DHX8Q14562 1220 aaKnown RBP21.74■■□□□ 1.07
SEC22A-208ENST00000487572 MCPH1Q8NEM0 835 aa21.74■■□□□ 1.07
SEC22A-208ENST00000487572 LRRC15Q8TF66 581 aa21.74■■□□□ 1.07
SEC22A-208ENST00000487572 HERVK_113Q902F9 699 aa21.74■■□□□ 1.07
SEC22A-208ENST00000487572 RUSC1Q9BVN2 902 aa21.74■■□□□ 1.07
SEC22A-208ENST00000487572 PANK2Q9BZ23 570 aa21.74■■□□□ 1.07
SEC22A-208ENST00000487572 POLD4Q9HCU8 107 aa21.74■■□□□ 1.07
SEC22A-208ENST00000487572 CXXC1Q9P0U4 656 aaPredicted RBP21.74■■□□□ 1.07
SEC22A-208ENST00000487572 NOC2LQ9Y3T9 749 aaKnown RBP21.74■■□□□ 1.07
SEC22A-208ENST00000487572 A0A087WZ62 844 aa21.73■■□□□ 1.07
SEC22A-208ENST00000487572 RPS6KA5O75582 802 aa21.73■■□□□ 1.07
SEC22A-208ENST00000487572 PLA2G4BP0C869 781 aa21.73■■□□□ 1.07
SEC22A-208ENST00000487572 CDC42EP1Q00587 391 aa21.73■■□□□ 1.07
SEC22A-208ENST00000487572 AXDND1Q5T1B0 1012 aaPredicted RBP21.73■■□□□ 1.07
SEC22A-208ENST00000487572 ZNF710Q8N1W2 664 aa21.73■■□□□ 1.07
SEC22A-208ENST00000487572 KCTD17Q8N5Z5 321 aa21.73■■□□□ 1.07
SEC22A-208ENST00000487572 USP38Q8NB14 1042 aa21.73■■□□□ 1.07
SEC22A-208ENST00000487572 ASAP3Q8TDY4 903 aa21.73■■□□□ 1.07
SEC22A-208ENST00000487572 FDXACB1Q9BRP7 624 aaPredicted RBP21.73■■□□□ 1.07
SEC22A-208ENST00000487572 MTIF3Q9H2K0 278 aaKnown RBP21.73■■□□□ 1.07
SEC22A-208ENST00000487572 PADI3Q9ULW8 664 aa21.73■■□□□ 1.07
SEC22A-208ENST00000487572 SQORQ9Y6N5 450 aa21.73■■□□□ 1.07
SEC22A-208ENST00000487572 A0A1W2PPC1 479 aa21.72■■□□□ 1.07
SEC22A-208ENST00000487572 CSDE1O75534 798 aaKnown RBP21.72■■□□□ 1.07
SEC22A-208ENST00000487572 ARL2P36404 184 aa21.72■■□□□ 1.07
SEC22A-208ENST00000487572 NFX1Q12986 1120 aaKnown RBP21.72■■□□□ 1.07
SEC22A-208ENST00000487572 IKBKEQ14164 716 aa21.72■■□□□ 1.07
SEC22A-208ENST00000487572 TPRNQ4KMQ1 711 aa21.72■■□□□ 1.07
SEC22A-208ENST00000487572 RRAGBQ5VZM2 374 aa21.72■■□□□ 1.07
SEC22A-208ENST00000487572 SHC4Q6S5L8 630 aa21.72■■□□□ 1.07
SEC22A-208ENST00000487572 ZNF410Q86VK4 478 aa21.72■■□□□ 1.07
SEC22A-208ENST00000487572 PDILTQ8N807 584 aa21.72■■□□□ 1.07
SEC22A-208ENST00000487572 RAD54LQ92698 747 aa21.72■■□□□ 1.07
SEC22A-208ENST00000487572 APBB2Q92870 758 aa21.72■■□□□ 1.07
SEC22A-208ENST00000487572 GCOM2Q9BZD3 368 aaPredicted RBP21.72■■□□□ 1.07
SEC22A-208ENST00000487572 SCAND2PQ9GZW5 306 aaPredicted RBP21.72■■□□□ 1.07
SEC22A-208ENST00000487572 GDPD2Q9HCC8 539 aa21.72■■□□□ 1.07
SEC22A-208ENST00000487572 BLOC1S4Q9NUP1 217 aa21.72■■□□□ 1.07
SEC22A-208ENST00000487572 TET1Q8NFU7 2136 aa21.71■■□□□ 1.07
SEC22A-208ENST00000487572 BAIAP3O94812 1187 aa21.71■■□□□ 1.07
SEC22A-208ENST00000487572 DARSP14868 501 aaKnown RBP21.71■■□□□ 1.07
SEC22A-208ENST00000487572 GLRA2P23416 452 aa21.71■■□□□ 1.07
SEC22A-208ENST00000487572 EIF4BP23588 611 aaKnown RBP21.71■■□□□ 1.07
SEC22A-208ENST00000487572 SLC12A3P55017 1021 aa21.71■■□□□ 1.07
SEC22A-208ENST00000487572 RAD51AP2Q09MP3 1159 aa21.71■■□□□ 1.07
SEC22A-208ENST00000487572 MCM6Q14566 821 aa21.71■■□□□ 1.07
SEC22A-208ENST00000487572 MXD4Q14582 209 aaPredicted RBP21.71■■□□□ 1.07
SEC22A-208ENST00000487572 RINT1Q6NUQ1 792 aa21.71■■□□□ 1.07
SEC22A-208ENST00000487572 FAM228AQ86W67 206 aa21.71■■□□□ 1.07
SEC22A-208ENST00000487572 SYT2Q8N9I0 419 aaPredicted RBP21.71■■□□□ 1.07
SEC22A-208ENST00000487572 RNF149Q8NC42 400 aa21.71■■□□□ 1.07
SEC22A-208ENST00000487572 CHMP5Q9NZZ3 219 aa21.71■■□□□ 1.07
SEC22A-208ENST00000487572 ST3GAL5Q9UNP4 418 aa21.71■■□□□ 1.07
SEC22A-208ENST00000487572 SLC4A7Q9Y6M7 1214 aa21.71■■□□□ 1.07
SEC22A-208ENST00000487572 A0A087X0B3 334 aa21.7■■□□□ 1.06
SEC22A-208ENST00000487572 ABHD14A-ACY1A0A1B0GW23 586 aa21.7■■□□□ 1.06
SEC22A-208ENST00000487572 ASAP2O43150 1006 aa21.7■■□□□ 1.06
SEC22A-208ENST00000487572 FGFR4P22455 802 aa21.7■■□□□ 1.06
SEC22A-208ENST00000487572 STAT6P42226 847 aa21.7■■□□□ 1.06
SEC22A-208ENST00000487572 KCNJ6P48051 423 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms