RNA–Protein interactions for RNA: ENST00000487539.1

CNN3-206, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 739 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-206ENST00000487539 TNFRSF10DQ9UBN6 386 aa5.82□□□□□ -1.48
CNN3-206ENST00000487539 PRKAG3Q9UGI9 489 aa5.82□□□□□ -1.48
CNN3-206ENST00000487539 ZNF652Q9Y2D9 606 aa5.82□□□□□ -1.48
CNN3-206ENST00000487539 MRVI1Q9Y6F6 885 aa5.82□□□□□ -1.48
CNN3-206ENST00000487539 ANKRD34BA5PLL1 514 aa5.81□□□□□ -1.48
CNN3-206ENST00000487539 SMAD7O15105 426 aaKnown RBP5.81□□□□□ -1.48
CNN3-206ENST00000487539 NTSR2O95665 410 aa5.81□□□□□ -1.48
CNN3-206ENST00000487539 EPHX1P07099 455 aa5.81□□□□□ -1.48
CNN3-206ENST00000487539 GJB1P08034 283 aa5.81□□□□□ -1.48
CNN3-206ENST00000487539 RPS12P25398 132 aaKnown RBP5.81□□□□□ -1.48
CNN3-206ENST00000487539 TCIRG1Q13488 830 aa5.81□□□□□ -1.48
CNN3-206ENST00000487539 SLC14A2Q15849 920 aa5.81□□□□□ -1.48
CNN3-206ENST00000487539 ADAT2Q7Z6V5 191 aaKnown RBP5.81□□□□□ -1.48
CNN3-206ENST00000487539 TDHQ8IZJ6 230 aa5.81□□□□□ -1.48
CNN3-206ENST00000487539 KLHL6Q8WZ60 621 aa5.81□□□□□ -1.48
CNN3-206ENST00000487539 MRIQ9BWK5 157 aa5.81□□□□□ -1.48
CNN3-206ENST00000487539 SCAND2PQ9GZW5 306 aaPredicted RBP5.81□□□□□ -1.48
CNN3-206ENST00000487539 NOL6Q9H6R4 1146 aaKnown RBP5.81□□□□□ -1.48
CNN3-206ENST00000487539 WDR26Q9H7D7 661 aa5.81□□□□□ -1.48
CNN3-206ENST00000487539 MBD1Q9UIS9 605 aaPredicted RBP5.81□□□□□ -1.48
CNN3-206ENST00000487539 R3HCC1Q9Y3T6 440 aaKnown RBP5.81□□□□□ -1.48
CNN3-206ENST00000487539 NCOR1O75376 2440 aa5.81□□□□□ -1.48
CNN3-206ENST00000487539 ZNF646O15015 1829 aaPredicted RBP5.81□□□□□ -1.48
CNN3-206ENST00000487539 CDH23Q9H251 3354 aa5.8□□□□□ -1.48
CNN3-206ENST00000487539 H0Y8X5 98 aa5.8□□□□□ -1.48
CNN3-206ENST00000487539 EPHB3P54753 998 aa5.8□□□□□ -1.48
CNN3-206ENST00000487539 GPSM2P81274 684 aa5.8□□□□□ -1.48
CNN3-206ENST00000487539 SRSF3P84103 164 aaKnown RBP5.8□□□□□ -1.48
CNN3-206ENST00000487539 CEP128Q6ZU80 1094 aa5.8□□□□□ -1.48
CNN3-206ENST00000487539 MCF2L2Q86YR7 1114 aa5.8□□□□□ -1.48
CNN3-206ENST00000487539 CRACR2BQ8N4Y2 399 aaPredicted RBP5.8□□□□□ -1.48
CNN3-206ENST00000487539 NAT16Q8N8M0 369 aa5.8□□□□□ -1.48
CNN3-206ENST00000487539 U2AF1L4Q8WU68 220 aaKnown RBP5.8□□□□□ -1.48
CNN3-206ENST00000487539 RCC1LQ96I51 464 aaKnown RBP5.8□□□□□ -1.48
CNN3-206ENST00000487539 PAWRQ96IZ0 340 aaKnown RBP5.8□□□□□ -1.48
CNN3-206ENST00000487539 SLC12A9Q9BXP2 914 aa5.8□□□□□ -1.48
CNN3-206ENST00000487539 NYXQ9GZU5 481 aa5.8□□□□□ -1.48
CNN3-206ENST00000487539 MYOZ2Q9NPC6 264 aa5.8□□□□□ -1.48
CNN3-206ENST00000487539 EBF1Q9UH73 591 aa5.8□□□□□ -1.48
CNN3-206ENST00000487539 GPR160Q9UJ42 338 aa5.8□□□□□ -1.48
CNN3-206ENST00000487539 SUGT1Q9Y2Z0 365 aa5.8□□□□□ -1.48
CNN3-206ENST00000487539 MUC6Q6W4X9 2439 aa5.8□□□□□ -1.48
CNN3-206ENST00000487539 NUP98P52948 1817 aa5.8□□□□□ -1.48
CNN3-206ENST00000487539 NRDCO43847 1150 aa5.79□□□□□ -1.48
CNN3-206ENST00000487539 USP2O75604 605 aaPredicted RBP5.79□□□□□ -1.48
CNN3-206ENST00000487539 BBOX1O75936 387 aa5.79□□□□□ -1.48
CNN3-206ENST00000487539 GSTM1P09488 218 aa5.79□□□□□ -1.48
CNN3-206ENST00000487539 INHBEP58166 350 aa5.79□□□□□ -1.48
CNN3-206ENST00000487539 RTP1P59025 263 aa5.79□□□□□ -1.48
CNN3-206ENST00000487539 FXNQ16595 210 aa5.79□□□□□ -1.48
CNN3-206ENST00000487539 FAM109BQ6ICB4 259 aaPredicted RBP5.79□□□□□ -1.48
CNN3-206ENST00000487539 POMZP3Q6PJE2 187 aa5.79□□□□□ -1.48
CNN3-206ENST00000487539 CYP2R1Q6VVX0 501 aa5.79□□□□□ -1.48
CNN3-206ENST00000487539 ZPBP2Q6X784 338 aa5.79□□□□□ -1.48
CNN3-206ENST00000487539 ARMC9Q7Z3E5 817 aa5.79□□□□□ -1.48
CNN3-206ENST00000487539 ZNF34Q8IZ26 560 aa5.79□□□□□ -1.48
CNN3-206ENST00000487539 FAM43AQ8N2R8 423 aa5.79□□□□□ -1.48
CNN3-206ENST00000487539 BRI3BPQ8WY22 251 aa5.79□□□□□ -1.48
CNN3-206ENST00000487539 ZDHHC15Q96MV8 337 aa5.79□□□□□ -1.48
CNN3-206ENST00000487539 APBA2Q99767 749 aa5.79□□□□□ -1.48
CNN3-206ENST00000487539 TMX4Q9H1E5 349 aaPredicted RBP5.79□□□□□ -1.48
CNN3-206ENST00000487539 AP5S1Q9NUS5 200 aa5.79□□□□□ -1.48
CNN3-206ENST00000487539 ERVK13-1Q9NX77 482 aa5.79□□□□□ -1.48
CNN3-206ENST00000487539 CNOT11Q9UKZ1 510 aaKnown RBP5.79□□□□□ -1.48
CNN3-206ENST00000487539 TAF6LQ9Y6J9 622 aa5.79□□□□□ -1.48
CNN3-206ENST00000487539 SIPA1L3O60292 1781 aaPredicted RBP5.78□□□□□ -1.48
CNN3-206ENST00000487539 LAMB2P55268 1798 aa5.78□□□□□ -1.48
CNN3-206ENST00000487539 A0A1W2PQ45 241 aaPredicted RBP5.78□□□□□ -1.48
CNN3-206ENST00000487539 A0A1W2PQY0 241 aa5.78□□□□□ -1.48
CNN3-206ENST00000487539 SSC5DA1L4H1 1573 aa5.78□□□□□ -1.48
CNN3-206ENST00000487539 FADS2P1A8MWK0 482 aa5.78□□□□□ -1.48
CNN3-206ENST00000487539 SGPL1O95470 568 aa5.78□□□□□ -1.48
CNN3-206ENST00000487539 CD3EP07766 207 aa5.78□□□□□ -1.48
CNN3-206ENST00000487539 ETFBP38117 255 aa5.78□□□□□ -1.48
CNN3-206ENST00000487539 GALK1P51570 392 aa5.78□□□□□ -1.48
CNN3-206ENST00000487539 RBM10P98175 930 aaKnown RBP5.78□□□□□ -1.48
CNN3-206ENST00000487539 GRB10Q13322 594 aa5.78□□□□□ -1.48
CNN3-206ENST00000487539 PPP2R5DQ14738 602 aa5.78□□□□□ -1.48
CNN3-206ENST00000487539 SLC10A5Q5PT55 438 aa5.78□□□□□ -1.48
CNN3-206ENST00000487539 RTP2Q5QGT7 225 aa5.78□□□□□ -1.48
CNN3-206ENST00000487539 HLA-DQA1Q5Y7H0 255 aa5.78□□□□□ -1.48
CNN3-206ENST00000487539 LARP1BQ659C4 914 aaKnown RBP5.78□□□□□ -1.48
CNN3-206ENST00000487539 GALNT18Q6P9A2 607 aa5.78□□□□□ -1.48
CNN3-206ENST00000487539 CNKSR3Q6P9H4 555 aa5.78□□□□□ -1.48
CNN3-206ENST00000487539 ADCY4Q8NFM4 1077 aa5.78□□□□□ -1.48
CNN3-206ENST00000487539 CELF1Q92879 486 aaKnown RBP5.78□□□□□ -1.48
CNN3-206ENST00000487539 FGD4Q96M96 766 aa5.78□□□□□ -1.48
CNN3-206ENST00000487539 TTYH1Q9H313 450 aaPredicted RBP5.78□□□□□ -1.48
CNN3-206ENST00000487539 SLITRK6Q9H5Y7 841 aa5.78□□□□□ -1.48
CNN3-206ENST00000487539 SIRT5Q9NXA8 310 aa5.78□□□□□ -1.48
CNN3-206ENST00000487539 WNT10BO00744 389 aa5.77□□□□□ -1.49
CNN3-206ENST00000487539 TFRCP02786 760 aaKnown RBP5.77□□□□□ -1.49
CNN3-206ENST00000487539 ZBTB48P10074 688 aaPredicted RBP5.77□□□□□ -1.49
CNN3-206ENST00000487539 LACTBP83111 547 aaPredicted RBP5.77□□□□□ -1.49
CNN3-206ENST00000487539 AMPD2Q01433 879 aa5.77□□□□□ -1.49
CNN3-206ENST00000487539 TEFQ10587 303 aa5.77□□□□□ -1.49
CNN3-206ENST00000487539 GRAPQ13588 217 aa5.77□□□□□ -1.49
CNN3-206ENST00000487539 NAALADL2Q58DX5 795 aa5.77□□□□□ -1.49
CNN3-206ENST00000487539 EEF1DP3Q658K8 133 aa5.77□□□□□ -1.49
CNN3-206ENST00000487539 NLRX1Q86UT6 975 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms