RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 OXER1Q8TDS5 423 aa27.63■■■□□ 2.01
LIME1-206ENST00000487026 SCLT1Q96NL6 688 aa27.63■■■□□ 2.01
LIME1-206ENST00000487026 NIFKQ9BYG3 293 aaKnown RBP27.63■■■□□ 2.01
LIME1-206ENST00000487026 RNF216Q9NWF9 866 aaPredicted RBP27.63■■■□□ 2.01
LIME1-206ENST00000487026 TMEM161AQ9NX61 479 aa27.63■■■□□ 2.01
LIME1-206ENST00000487026 PCDHGC5Q9Y5F6 944 aa27.63■■■□□ 2.01
LIME1-206ENST00000487026 CCDC194A0A1B0GVG4 234 aa27.62■■■□□ 2.01
LIME1-206ENST00000487026 DDX11L8A8MPP1 907 aa27.62■■■□□ 2.01
LIME1-206ENST00000487026 CSDE1O75534 798 aaKnown RBP27.62■■■□□ 2.01
LIME1-206ENST00000487026 CTDNEP1O95476 244 aa27.62■■■□□ 2.01
LIME1-206ENST00000487026 AK2P54819 239 aa27.62■■■□□ 2.01
LIME1-206ENST00000487026 PCDHB12Q9Y5F1 795 aa27.62■■■□□ 2.01
LIME1-206ENST00000487026 FNDC1Q4ZHG4 1894 aaPredicted RBP27.61■■■□□ 2.01
LIME1-206ENST00000487026 EML1O00423 815 aa27.61■■■□□ 2.01
LIME1-206ENST00000487026 DARSP14868 501 aaKnown RBP27.61■■■□□ 2.01
LIME1-206ENST00000487026 ZSCAN20P17040 1043 aaPredicted RBP27.61■■■□□ 2.01
LIME1-206ENST00000487026 NLRP7Q8WX94 980 aa27.61■■■□□ 2.01
LIME1-206ENST00000487026 CEP89Q96ST8 783 aa27.61■■■□□ 2.01
LIME1-206ENST00000487026 ELAC1Q9H777 363 aaKnown RBP27.61■■■□□ 2.01
LIME1-206ENST00000487026 ADAM15Q13444 863 aa27.6■■■□□ 2.01
LIME1-206ENST00000487026 RBM23Q86U06 439 aaKnown RBP27.6■■■□□ 2.01
LIME1-206ENST00000487026 NECAB1Q8N987 351 aa27.6■■■□□ 2.01
LIME1-206ENST00000487026 CWH43Q9H720 699 aa27.6■■■□□ 2.01
LIME1-206ENST00000487026 STK36Q9NRP7 1315 aa27.6■■■□□ 2.01
LIME1-206ENST00000487026 TBX10O75333 385 aa27.59■■■□□ 2.01
LIME1-206ENST00000487026 XBP1P17861 261 aa27.59■■■□□ 2.01
LIME1-206ENST00000487026 ANAPC15P60006 121 aa27.59■■■□□ 2.01
LIME1-206ENST00000487026 EARS2Q5JPH6 523 aaKnown RBP27.59■■■□□ 2.01
LIME1-206ENST00000487026 PIK3AP1Q6ZUJ8 805 aa27.59■■■□□ 2.01
LIME1-206ENST00000487026 NEK8Q86SG6 692 aa27.59■■■□□ 2.01
LIME1-206ENST00000487026 ZNF710Q8N1W2 664 aa27.59■■■□□ 2.01
LIME1-206ENST00000487026 COLGALT1Q8NBJ5 622 aa27.59■■■□□ 2.01
LIME1-206ENST00000487026 RNF169Q8NCN4 708 aa27.59■■■□□ 2.01
LIME1-206ENST00000487026 AAASQ9NRG9 546 aa27.59■■■□□ 2.01
LIME1-206ENST00000487026 RNF19AQ9NV58 838 aa27.59■■■□□ 2.01
LIME1-206ENST00000487026 ORC3Q9UBD5 711 aaPredicted RBP27.59■■■□□ 2.01
LIME1-206ENST00000487026 CCNT1O60563 726 aaKnown RBP27.58■■■□□ 2.01
LIME1-206ENST00000487026 NRIP1P48552 1158 aa27.58■■■□□ 2.01
LIME1-206ENST00000487026 LRRC55Q6ZSA7 311 aa27.58■■■□□ 2.01
LIME1-206ENST00000487026 ANO5Q75V66 913 aa27.58■■■□□ 2.01
LIME1-206ENST00000487026 MICAL1Q8TDZ2 1067 aa27.58■■■□□ 2.01
LIME1-206ENST00000487026 CASD1Q96PB1 797 aa27.58■■■□□ 2.01
LIME1-206ENST00000487026 LRFN3Q9BTN0 628 aa27.58■■■□□ 2.01
LIME1-206ENST00000487026 KCNMB3Q9NPA1 279 aa27.58■■■□□ 2.01
LIME1-206ENST00000487026 VAV3Q9UKW4 847 aa27.58■■■□□ 2.01
LIME1-206ENST00000487026 FAM50BQ9Y247 325 aa27.58■■■□□ 2.01
LIME1-206ENST00000487026 PLXNA4Q9HCM2 1894 aa27.57■■■□□ 2
LIME1-206ENST00000487026 IGKV6-21A0A0C4DH24 114 aa27.57■■■□□ 2
LIME1-206ENST00000487026 FAM86C2PA6NEL3 165 aa27.57■■■□□ 2
LIME1-206ENST00000487026 PI4K2BG5E9Z4 385 aa27.57■■■□□ 2
LIME1-206ENST00000487026 FGF18O76093 207 aa27.57■■■□□ 2
LIME1-206ENST00000487026 FDPSP14324 419 aaKnown RBP27.57■■■□□ 2
LIME1-206ENST00000487026 PSMC5P62195 406 aa27.57■■■□□ 2
LIME1-206ENST00000487026 PLA2G4FQ68DD2 849 aa27.57■■■□□ 2
LIME1-206ENST00000487026 ECHDC2Q86YB7 292 aa27.57■■■□□ 2
LIME1-206ENST00000487026 THNSL1Q8IYQ7 743 aa27.57■■■□□ 2
LIME1-206ENST00000487026 PPP2R3CQ969Q6 453 aa27.57■■■□□ 2
LIME1-206ENST00000487026 TMEM117Q9H0C3 514 aa27.57■■■□□ 2
LIME1-206ENST00000487026 A0A087WZ62 844 aa27.56■■■□□ 2
LIME1-206ENST00000487026 FAM205CA6NFA0 338 aa27.56■■■□□ 2
LIME1-206ENST00000487026 MAFO75444 373 aaPredicted RBP27.56■■■□□ 2
LIME1-206ENST00000487026 LARGE1O95461 756 aa27.56■■■□□ 2
LIME1-206ENST00000487026 NDUFV1P49821 464 aa27.56■■■□□ 2
LIME1-206ENST00000487026 ERVFC1P60507 584 aa27.56■■■□□ 2
LIME1-206ENST00000487026 PPP2R5CQ13362 524 aa27.56■■■□□ 2
LIME1-206ENST00000487026 ANKRD1Q15327 319 aa27.56■■■□□ 2
LIME1-206ENST00000487026 ME3Q16798 604 aa27.56■■■□□ 2
LIME1-206ENST00000487026 PPP4R3AQ6IN85 833 aa27.56■■■□□ 2
LIME1-206ENST00000487026 HAS1Q92839 578 aa27.56■■■□□ 2
LIME1-206ENST00000487026 FAM20AQ96MK3 541 aa27.56■■■□□ 2
LIME1-206ENST00000487026 FDXACB1Q9BRP7 624 aaPredicted RBP27.56■■■□□ 2
LIME1-206ENST00000487026 GCOM2Q9BZD3 368 aaPredicted RBP27.56■■■□□ 2
LIME1-206ENST00000487026 C11orf16Q9NQ32 467 aa27.56■■■□□ 2
LIME1-206ENST00000487026 SUCLA2Q9P2R7 463 aaPredicted RBP27.56■■■□□ 2
LIME1-206ENST00000487026 PER2O15055 1255 aa27.55■■■□□ 2
LIME1-206ENST00000487026 MBTPS2O43462 519 aa27.55■■■□□ 2
LIME1-206ENST00000487026 DNM2P50570 870 aa27.55■■■□□ 2
LIME1-206ENST00000487026 NPEPPSP55786 919 aa27.55■■■□□ 2
LIME1-206ENST00000487026 ZP2Q05996 745 aa27.55■■■□□ 2
LIME1-206ENST00000487026 NR5A1Q13285 461 aa27.55■■■□□ 2
LIME1-206ENST00000487026 TMEM31Q5JXX7 168 aa27.55■■■□□ 2
LIME1-206ENST00000487026 RHPN2Q8IUC4 686 aa27.55■■■□□ 2
LIME1-206ENST00000487026 KSR1Q8IVT5 923 aa27.55■■■□□ 2
LIME1-206ENST00000487026 ZNF579Q8NAF0 562 aaKnown RBP27.55■■■□□ 2
LIME1-206ENST00000487026 CD207Q9UJ71 328 aa27.55■■■□□ 2
LIME1-206ENST00000487026 MARCH6O60337 910 aa27.54■■■□□ 2
LIME1-206ENST00000487026 GCFC2P16383 781 aaKnown RBP27.54■■■□□ 2
LIME1-206ENST00000487026 PBX3P40426 434 aa27.54■■■□□ 2
LIME1-206ENST00000487026 QARSP47897 775 aaKnown RBP27.54■■■□□ 2
LIME1-206ENST00000487026 UBE3AQ05086 875 aa27.54■■■□□ 2
LIME1-206ENST00000487026 CLLU1OSQ5K130 101 aa27.54■■■□□ 2
LIME1-206ENST00000487026 POTEDQ86YR6 584 aa27.54■■■□□ 2
LIME1-206ENST00000487026 EFHBQ8N7U6 833 aa27.54■■■□□ 2
LIME1-206ENST00000487026 C5orf42Q9H799 3197 aa27.54■■■□□ 2
LIME1-206ENST00000487026 TLE6Q9H808 572 aa27.54■■■□□ 2
LIME1-206ENST00000487026 TLR9Q9NR96 1032 aa27.54■■■□□ 2
LIME1-206ENST00000487026 CLEC1BQ9P126 229 aa27.54■■■□□ 2
LIME1-206ENST00000487026 WRAP73Q9P2S5 460 aaPredicted RBP27.54■■■□□ 2
LIME1-206ENST00000487026 A0A0U1RQF3 1178 aa27.53■■■□□ 2
LIME1-206ENST00000487026 HOXA2O43364 376 aa27.53■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms