RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 SSTR3P32745 418 aaPredicted RBP13.42□□□□□ -0.26
HSPG2-211ENST00000486901 GJC1P36383 396 aa13.42□□□□□ -0.26
HSPG2-211ENST00000486901 TMEM119Q4V9L6 283 aa13.42□□□□□ -0.26
HSPG2-211ENST00000486901 TRIM68Q6AZZ1 485 aa13.42□□□□□ -0.26
HSPG2-211ENST00000486901 TPH2Q8IWU9 490 aa13.42□□□□□ -0.26
HSPG2-211ENST00000486901 CTNNBL1Q8WYA6 563 aaPredicted RBP13.42□□□□□ -0.26
HSPG2-211ENST00000486901 DHX36Q9H2U1 1008 aaKnown RBP13.42□□□□□ -0.26
HSPG2-211ENST00000486901 DNAJC12Q9UKB3 198 aa13.42□□□□□ -0.26
HSPG2-211ENST00000486901 MYH7BA7E2Y1 1941 aa13.41□□□□□ -0.26
HSPG2-211ENST00000486901 MYH1P12882 1939 aa13.41□□□□□ -0.26
HSPG2-211ENST00000486901 MYH4Q9Y623 1939 aa13.41□□□□□ -0.26
HSPG2-211ENST00000486901 DIAPH2O60879 1101 aa13.41□□□□□ -0.26
HSPG2-211ENST00000486901 PIAS1O75925 651 aa13.41□□□□□ -0.26
HSPG2-211ENST00000486901 NAIF1Q69YI7 327 aaPredicted RBP13.41□□□□□ -0.26
HSPG2-211ENST00000486901 MYCT1Q8N699 235 aa13.41□□□□□ -0.26
HSPG2-211ENST00000486901 ATP8B4Q8TF62 1192 aa13.41□□□□□ -0.26
HSPG2-211ENST00000486901 PBKQ96KB5 322 aa13.41□□□□□ -0.26
HSPG2-211ENST00000486901 P2RX7Q99572 595 aaKnown RBP13.41□□□□□ -0.26
HSPG2-211ENST00000486901 RTFDC1Q9BY42 306 aaPredicted RBP13.41□□□□□ -0.26
HSPG2-211ENST00000486901 COG5Q9UP83 839 aa13.41□□□□□ -0.26
HSPG2-211ENST00000486901 PCDHAC2Q9Y5I4 1007 aa13.41□□□□□ -0.26
HSPG2-211ENST00000486901 CCT8L1PA6NM43 557 aa13.41□□□□□ -0.26
HSPG2-211ENST00000486901 ATP6V1G2O95670 118 aa13.41□□□□□ -0.26
HSPG2-211ENST00000486901 STAT1P42224 750 aa13.41□□□□□ -0.26
HSPG2-211ENST00000486901 VPS36Q86VN1 386 aa13.41□□□□□ -0.26
HSPG2-211ENST00000486901 CCDC105Q8IYK2 499 aa13.41□□□□□ -0.26
HSPG2-211ENST00000486901 KAT5Q92993 513 aa13.41□□□□□ -0.26
HSPG2-211ENST00000486901 CUL5Q93034 780 aa13.41□□□□□ -0.26
HSPG2-211ENST00000486901 ZNF622Q969S3 477 aaKnown RBP eCLIP13.41□□□□□ -0.26
HSPG2-211ENST00000486901 SAMD15Q9P1V8 674 aa13.41□□□□□ -0.26
HSPG2-211ENST00000486901 TCP11X1B4DZS4 312 aa13.41□□□□□ -0.26
HSPG2-211ENST00000486901 CBWD6Q4V339 395 aa13.41□□□□□ -0.26
HSPG2-211ENST00000486901 CBWD3Q5JTY5 395 aa13.41□□□□□ -0.26
HSPG2-211ENST00000486901 CBWD5Q5RIA9 395 aa13.41□□□□□ -0.26
HSPG2-211ENST00000486901 NUGGCQ68CJ6 796 aa13.41□□□□□ -0.26
HSPG2-211ENST00000486901 JAMLQ86YT9 394 aa13.41□□□□□ -0.26
HSPG2-211ENST00000486901 C1orf54Q8WWF1 131 aa13.41□□□□□ -0.26
HSPG2-211ENST00000486901 HOOK2Q96ED9 719 aa13.41□□□□□ -0.26
HSPG2-211ENST00000486901 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.41□□□□□ -0.26
HSPG2-211ENST00000486901 PCDHA2Q9Y5H9 948 aa13.41□□□□□ -0.26
HSPG2-211ENST00000486901 TNFAIP3P21580 790 aa13.4□□□□□ -0.26
HSPG2-211ENST00000486901 RPL21P46778 160 aaKnown RBP13.4□□□□□ -0.26
HSPG2-211ENST00000486901 MAP2K1Q02750 393 aaPredicted RBP13.4□□□□□ -0.26
HSPG2-211ENST00000486901 KNOP1Q1ED39 458 aaKnown RBP13.4□□□□□ -0.26
HSPG2-211ENST00000486901 EPC2Q52LR7 807 aa13.4□□□□□ -0.26
HSPG2-211ENST00000486901 SPATS2Q86XZ4 545 aaKnown RBP13.4□□□□□ -0.26
HSPG2-211ENST00000486901 PROM2Q8N271 834 aa13.4□□□□□ -0.26
HSPG2-211ENST00000486901 NEK9Q8TD19 979 aa13.4□□□□□ -0.26
HSPG2-211ENST00000486901 ACTRT1Q8TDG2 376 aa13.4□□□□□ -0.26
HSPG2-211ENST00000486901 MICAL1Q8TDZ2 1067 aa13.4□□□□□ -0.26
HSPG2-211ENST00000486901 MTMR4Q9NYA4 1195 aa13.4□□□□□ -0.26
HSPG2-211ENST00000486901 A6NNZ2 444 aa13.4□□□□□ -0.26
HSPG2-211ENST00000486901 ZNF76P36508 570 aa13.4□□□□□ -0.26
HSPG2-211ENST00000486901 BIRC3Q13489 604 aa13.4□□□□□ -0.26
HSPG2-211ENST00000486901 GIT2Q14161 759 aa13.4□□□□□ -0.26
HSPG2-211ENST00000486901 TUBB8Q3ZCM7 444 aa13.4□□□□□ -0.26
HSPG2-211ENST00000486901 ZDHHC14Q8IZN3 488 aa13.4□□□□□ -0.26
HSPG2-211ENST00000486901 TAB3Q8N5C8 712 aaPredicted RBP13.4□□□□□ -0.26
HSPG2-211ENST00000486901 WDR66Q8TBY9 1149 aa13.4□□□□□ -0.26
HSPG2-211ENST00000486901 AGAP11Q8TF27 550 aa13.4□□□□□ -0.26
HSPG2-211ENST00000486901 ATG4AQ8WYN0 398 aa13.4□□□□□ -0.26
HSPG2-211ENST00000486901 MIEF2Q96C03 454 aa13.4□□□□□ -0.26
HSPG2-211ENST00000486901 DDX4Q9NQI0 724 aaKnown RBP13.4□□□□□ -0.26
HSPG2-211ENST00000486901 ZBTB21Q9ULJ3 1066 aa13.4□□□□□ -0.26
HSPG2-211ENST00000486901 CASZ1Q86V15 1759 aa13.4□□□□□ -0.27
HSPG2-211ENST00000486901 TBCAO75347 108 aaKnown RBP13.4□□□□□ -0.27
HSPG2-211ENST00000486901 DDR1Q08345 913 aa13.4□□□□□ -0.27
HSPG2-211ENST00000486901 SLC35C1Q96A29 364 aa13.4□□□□□ -0.27
HSPG2-211ENST00000486901 NUCKS1Q9H1E3 243 aaKnown RBP13.4□□□□□ -0.27
HSPG2-211ENST00000486901 ENO4A6NNW6 628 aa13.39□□□□□ -0.27
HSPG2-211ENST00000486901 YY1P25490 414 aa13.39□□□□□ -0.27
HSPG2-211ENST00000486901 PSEN1P49768 467 aa13.39□□□□□ -0.27
HSPG2-211ENST00000486901 TPTE2Q6XPS3 522 aa13.39□□□□□ -0.27
HSPG2-211ENST00000486901 ANKS4BQ8N8V4 417 aa13.39□□□□□ -0.27
HSPG2-211ENST00000486901 ZSWIM2Q8NEG5 633 aa13.39□□□□□ -0.27
HSPG2-211ENST00000486901 DONSONQ9NYP3 566 aa13.39□□□□□ -0.27
HSPG2-211ENST00000486901 DNM3Q9UQ16 869 aa13.39□□□□□ -0.27
HSPG2-211ENST00000486901 FOXN3O00409 490 aaPredicted RBP13.39□□□□□ -0.27
HSPG2-211ENST00000486901 IGF2BP3O00425 579 aaKnown RBP eCLIP13.39□□□□□ -0.27
HSPG2-211ENST00000486901 ANP32DO95626 131 aa13.39□□□□□ -0.27
HSPG2-211ENST00000486901 GPSM2P81274 684 aa13.39□□□□□ -0.27
HSPG2-211ENST00000486901 PSMD2Q13200 908 aa13.39□□□□□ -0.27
HSPG2-211ENST00000486901 ERMARDQ5T6L9 678 aa13.39□□□□□ -0.27
HSPG2-211ENST00000486901 TTC27Q6P3X3 843 aa13.39□□□□□ -0.27
HSPG2-211ENST00000486901 LRIG3Q6UXM1 1119 aa13.39□□□□□ -0.27
HSPG2-211ENST00000486901 BARGINQ6ZT62 677 aa13.39□□□□□ -0.27
HSPG2-211ENST00000486901 C16orf86Q6ZW13 317 aa13.39□□□□□ -0.27
HSPG2-211ENST00000486901 YTHDF3Q7Z739 585 aaKnown RBP13.39□□□□□ -0.27
HSPG2-211ENST00000486901 ZFPM1Q8IX07 1006 aa13.39□□□□□ -0.27
HSPG2-211ENST00000486901 LZTS2Q9BRK4 669 aa13.39□□□□□ -0.27
HSPG2-211ENST00000486901 ERP44Q9BS26 406 aa13.39□□□□□ -0.27
HSPG2-211ENST00000486901 FAM129AQ9BZQ8 928 aa13.39□□□□□ -0.27
HSPG2-211ENST00000486901 ANKRD2Q9GZV1 360 aa13.39□□□□□ -0.27
HSPG2-211ENST00000486901 EPB41L4BQ9H329 900 aa13.39□□□□□ -0.27
HSPG2-211ENST00000486901 DOCK2Q92608 1830 aa13.39□□□□□ -0.27
HSPG2-211ENST00000486901 H0Y3Z8 333 aa13.38□□□□□ -0.27
HSPG2-211ENST00000486901 DLATP10515 647 aaKnown RBP13.38□□□□□ -0.27
HSPG2-211ENST00000486901 MRPL12P52815 198 aaKnown RBP13.38□□□□□ -0.27
HSPG2-211ENST00000486901 PDIA5Q14554 519 aa13.38□□□□□ -0.27
HSPG2-211ENST00000486901 EPHA7Q15375 998 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms