RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 PAN2Q504Q3 1202 aaKnown RBP20.63■□□□□ 0.89
PRPF40A-209ENST00000486100 PLA2G4FQ68DD2 849 aa20.63■□□□□ 0.89
PRPF40A-209ENST00000486100 EXOC8Q8IYI6 725 aa20.63■□□□□ 0.89
PRPF40A-209ENST00000486100 C8orf76Q96K31 380 aa20.63■□□□□ 0.89
PRPF40A-209ENST00000486100 SCLT1Q96NL6 688 aa20.63■□□□□ 0.89
PRPF40A-209ENST00000486100 GCOM2Q9BZD3 368 aaPredicted RBP20.63■□□□□ 0.89
PRPF40A-209ENST00000486100 LMAN2LQ9H0V9 348 aa20.63■□□□□ 0.89
PRPF40A-209ENST00000486100 TMEM161AQ9NX61 479 aa20.63■□□□□ 0.89
PRPF40A-209ENST00000486100 RGL1Q9NZL6 768 aa20.63■□□□□ 0.89
PRPF40A-209ENST00000486100 SUCLA2Q9P2R7 463 aaPredicted RBP20.63■□□□□ 0.89
PRPF40A-209ENST00000486100 WRAP73Q9P2S5 460 aaPredicted RBP20.63■□□□□ 0.89
PRPF40A-209ENST00000486100 PCDHA12Q9UN75 941 aa20.63■□□□□ 0.89
PRPF40A-209ENST00000486100 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.62■□□□□ 0.89
PRPF40A-209ENST00000486100 GATMP50440 423 aa20.62■□□□□ 0.89
PRPF40A-209ENST00000486100 NPEPPSP55786 919 aa20.62■□□□□ 0.89
PRPF40A-209ENST00000486100 HMGN5P82970 282 aaKnown RBP20.62■□□□□ 0.89
PRPF40A-209ENST00000486100 GUCY1B3Q02153 619 aa20.62■□□□□ 0.89
PRPF40A-209ENST00000486100 TIGD5Q53EQ6 642 aa20.62■□□□□ 0.89
PRPF40A-209ENST00000486100 NAALADL2Q58DX5 795 aa20.62■□□□□ 0.89
PRPF40A-209ENST00000486100 FAM102BQ5T8I3 360 aa20.62■□□□□ 0.89
PRPF40A-209ENST00000486100 OTUD6AQ7L8S5 288 aa20.62■□□□□ 0.89
PRPF40A-209ENST00000486100 ADAMTS19Q8TE59 1207 aa20.62■□□□□ 0.89
PRPF40A-209ENST00000486100 P2RX5Q93086 422 aa20.62■□□□□ 0.89
PRPF40A-209ENST00000486100 DYDC2Q96IM9 177 aa20.62■□□□□ 0.89
PRPF40A-209ENST00000486100 CEP170P1Q96L14 293 aa20.62■□□□□ 0.89
PRPF40A-209ENST00000486100 LXNQ9BS40 222 aa20.62■□□□□ 0.89
PRPF40A-209ENST00000486100 ZSWIM4Q9H7M6 989 aa20.62■□□□□ 0.89
PRPF40A-209ENST00000486100 ATP6V0A4Q9HBG4 840 aa20.62■□□□□ 0.89
PRPF40A-209ENST00000486100 EVPLQ92817 2033 aa20.61■□□□□ 0.89
PRPF40A-209ENST00000486100 SPTBN5Q9NRC6 3674 aaKnown RBP20.61■□□□□ 0.89
PRPF40A-209ENST00000486100 WNT7AO00755 349 aa20.61■□□□□ 0.89
PRPF40A-209ENST00000486100 GRM6O15303 877 aa20.61■□□□□ 0.89
PRPF40A-209ENST00000486100 NEMFO60524 1076 aa20.61■□□□□ 0.89
PRPF40A-209ENST00000486100 SLITRK3O94933 977 aa20.61■□□□□ 0.89
PRPF40A-209ENST00000486100 KCNQ1P51787 676 aa20.61■□□□□ 0.89
PRPF40A-209ENST00000486100 ZNF579Q8NAF0 562 aaKnown RBP20.61■□□□□ 0.89
PRPF40A-209ENST00000486100 SLC7A3Q8WY07 619 aa20.61■□□□□ 0.89
PRPF40A-209ENST00000486100 MTMR9Q96QG7 549 aa20.61■□□□□ 0.89
PRPF40A-209ENST00000486100 TTC12Q9H892 705 aaPredicted RBP20.61■□□□□ 0.89
PRPF40A-209ENST00000486100 PLAGL2Q9UPG8 496 aa20.61■□□□□ 0.89
PRPF40A-209ENST00000486100 COL4A4P53420 1690 aaPredicted RBP20.61■□□□□ 0.89
PRPF40A-209ENST00000486100 REV3LO60673 3130 aa20.6■□□□□ 0.89
PRPF40A-209ENST00000486100 CUL9Q8IWT3 2517 aa20.6■□□□□ 0.89
PRPF40A-209ENST00000486100 A0A087WZ62 844 aa20.6■□□□□ 0.89
PRPF40A-209ENST00000486100 TBKBP1A7MCY6 615 aa20.6■□□□□ 0.89
PRPF40A-209ENST00000486100 YWHABP31946 246 aaKnown RBP20.6■□□□□ 0.89
PRPF40A-209ENST00000486100 TXKP42681 527 aa20.6■□□□□ 0.89
PRPF40A-209ENST00000486100 CTTNQ14247 550 aaKnown RBP20.6■□□□□ 0.89
PRPF40A-209ENST00000486100 ZNF410Q86VK4 478 aa20.6■□□□□ 0.89
PRPF40A-209ENST00000486100 RHPN2Q8IUC4 686 aa20.6■□□□□ 0.89
PRPF40A-209ENST00000486100 TPH2Q8IWU9 490 aa20.6■□□□□ 0.89
PRPF40A-209ENST00000486100 FBXO18Q8NFZ0 1043 aa20.6■□□□□ 0.89
PRPF40A-209ENST00000486100 HSD17B14Q9BPX1 270 aa20.6■□□□□ 0.89
PRPF40A-209ENST00000486100 EIF2AK1Q9BQI3 630 aaKnown RBP20.6■□□□□ 0.89
PRPF40A-209ENST00000486100 FDXACB1Q9BRP7 624 aaPredicted RBP20.6■□□□□ 0.89
PRPF40A-209ENST00000486100 INO80BQ9C086 356 aaPredicted RBP20.6■□□□□ 0.89
PRPF40A-209ENST00000486100 FOXP1Q9H334 677 aaPredicted RBP20.6■□□□□ 0.89
PRPF40A-209ENST00000486100 NSUN3Q9H649 340 aaKnown RBP20.6■□□□□ 0.89
PRPF40A-209ENST00000486100 DHX33Q9H6R0 707 aaKnown RBP20.6■□□□□ 0.89
PRPF40A-209ENST00000486100 UBE2ZQ9H832 354 aaPredicted RBP20.6■□□□□ 0.89
PRPF40A-209ENST00000486100 CSDE1O75534 798 aaKnown RBP20.59■□□□□ 0.89
PRPF40A-209ENST00000486100 FGFR4P22455 802 aa20.59■□□□□ 0.89
PRPF40A-209ENST00000486100 RFC5P40937 340 aa20.59■□□□□ 0.89
PRPF40A-209ENST00000486100 CYP4A11Q02928 519 aa20.59■□□□□ 0.89
PRPF40A-209ENST00000486100 RABEP1Q15276 862 aa20.59■□□□□ 0.89
PRPF40A-209ENST00000486100 TCEAL5Q5H9L2 206 aa20.59■□□□□ 0.89
PRPF40A-209ENST00000486100 FAM184AQ8NB25 1140 aa20.59■□□□□ 0.89
PRPF40A-209ENST00000486100 UHRF1Q96T88 793 aaPredicted RBP20.59■□□□□ 0.89
PRPF40A-209ENST00000486100 ALG13Q9NP73 1137 aaKnown RBP20.59■□□□□ 0.89
PRPF40A-209ENST00000486100 CHST12Q9NRB3 414 aa20.59■□□□□ 0.89
PRPF40A-209ENST00000486100 A0A0U1RQF3 1178 aa20.58■□□□□ 0.89
PRPF40A-209ENST00000486100 TNFRSF10AO00220 468 aa20.58■□□□□ 0.89
PRPF40A-209ENST00000486100 ZBTB39O15060 712 aa20.58■□□□□ 0.89
PRPF40A-209ENST00000486100 HOXA2O43364 376 aa20.58■□□□□ 0.89
PRPF40A-209ENST00000486100 LYPLA2O95372 231 aa20.58■□□□□ 0.89
PRPF40A-209ENST00000486100 FGFR1P11362 822 aa20.58■□□□□ 0.89
PRPF40A-209ENST00000486100 ATP2B1P20020 1258 aa20.58■□□□□ 0.89
PRPF40A-209ENST00000486100 POLGP54098 1239 aaPredicted RBP20.58■□□□□ 0.89
PRPF40A-209ENST00000486100 XKR9Q5GH70 373 aa20.58■□□□□ 0.89
PRPF40A-209ENST00000486100 ECHDC2Q86YB7 292 aa20.58■□□□□ 0.89
PRPF40A-209ENST00000486100 KSR1Q8IVT5 923 aa20.58■□□□□ 0.89
PRPF40A-209ENST00000486100 KLHL23Q8NBE8 558 aa20.58■□□□□ 0.89
PRPF40A-209ENST00000486100 SPPL3Q8TCT6 385 aa20.58■□□□□ 0.89
PRPF40A-209ENST00000486100 AAASQ9NRG9 546 aa20.58■□□□□ 0.89
PRPF40A-209ENST00000486100 TYW1Q9NV66 732 aaKnown RBP20.58■□□□□ 0.89
PRPF40A-209ENST00000486100 DACT1Q9NYF0 836 aa20.58■□□□□ 0.89
PRPF40A-209ENST00000486100 XIRP2A4UGR9 3374 aa20.57■□□□□ 0.88
PRPF40A-209ENST00000486100 GAS2O43903 313 aaKnown RBP20.57■□□□□ 0.88
PRPF40A-209ENST00000486100 ITGB1P05556 798 aa20.57■□□□□ 0.88
PRPF40A-209ENST00000486100 SFPQP23246 707 aaKnown RBP eCLIP20.57■□□□□ 0.88
PRPF40A-209ENST00000486100 MCM7P33993 719 aa20.57■□□□□ 0.88
PRPF40A-209ENST00000486100 CAMK1Q14012 370 aa20.57■□□□□ 0.88
PRPF40A-209ENST00000486100 SPOUT1Q5T280 376 aaKnown RBP20.57■□□□□ 0.88
PRPF40A-209ENST00000486100 NEK9Q8TD19 979 aa20.57■□□□□ 0.88
PRPF40A-209ENST00000486100 PRPF31Q8WWY3 499 aaKnown RBP20.57■□□□□ 0.88
PRPF40A-209ENST00000486100 TMEM143Q96AN5 459 aa20.57■□□□□ 0.88
PRPF40A-209ENST00000486100 TMEM117Q9H0C3 514 aa20.57■□□□□ 0.88
PRPF40A-209ENST00000486100 TMEM60Q9H2L4 133 aa20.57■□□□□ 0.88
PRPF40A-209ENST00000486100 PCDHB12Q9Y5F1 795 aa20.57■□□□□ 0.88
PRPF40A-209ENST00000486100 COL4A3BPQ9Y5P4 624 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 103.6 ms