RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 MPHOSPH9Q99550 1183 aa6.1□□□□□ -1.43
GCFC2-209ENST00000486016 HAPLN2Q9GZV7 340 aa6.1□□□□□ -1.43
GCFC2-209ENST00000486016 DNAJC8O75937 253 aaPredicted RBP6.09□□□□□ -1.43
GCFC2-209ENST00000486016 MCM7P33993 719 aa6.09□□□□□ -1.43
GCFC2-209ENST00000486016 SLC6A3Q01959 620 aa6.09□□□□□ -1.43
GCFC2-209ENST00000486016 TUBA3CQ13748 450 aa6.09□□□□□ -1.43
GCFC2-209ENST00000486016 FNDC3BQ53EP0 1204 aaKnown RBP6.09□□□□□ -1.43
GCFC2-209ENST00000486016 TUBA3EQ6PEY2 450 aa6.09□□□□□ -1.43
GCFC2-209ENST00000486016 SGMS1Q86VZ5 419 aa6.09□□□□□ -1.43
GCFC2-209ENST00000486016 OR5AN1Q8NGI8 311 aa6.09□□□□□ -1.43
GCFC2-209ENST00000486016 MAML3Q96JK9 1138 aa6.09□□□□□ -1.43
GCFC2-209ENST00000486016 TRIM8Q9BZR9 551 aa6.09□□□□□ -1.43
GCFC2-209ENST00000486016 SLC6A15Q9H2J7 730 aa6.09□□□□□ -1.43
GCFC2-209ENST00000486016 SAE1Q9UBE0 346 aaPredicted RBP6.09□□□□□ -1.43
GCFC2-209ENST00000486016 MAGEL2Q9UJ55 1249 aa6.09□□□□□ -1.43
GCFC2-209ENST00000486016 GIT1Q9Y2X7 761 aa6.09□□□□□ -1.43
GCFC2-209ENST00000486016 APPP05067 770 aa6.08□□□□□ -1.44
GCFC2-209ENST00000486016 KIF11P52732 1056 aa6.08□□□□□ -1.44
GCFC2-209ENST00000486016 SESN2P58004 480 aaPredicted RBP6.08□□□□□ -1.44
GCFC2-209ENST00000486016 SQSTM1Q13501 440 aa6.08□□□□□ -1.44
GCFC2-209ENST00000486016 RRP1BQ14684 758 aaKnown RBP6.08□□□□□ -1.44
GCFC2-209ENST00000486016 THEMISQ8N1K5 641 aaPredicted RBP6.08□□□□□ -1.44
GCFC2-209ENST00000486016 CHST14Q8NCH0 376 aa6.08□□□□□ -1.44
GCFC2-209ENST00000486016 SLC7A6OSQ96CW6 309 aaPredicted RBP6.08□□□□□ -1.44
GCFC2-209ENST00000486016 IKZF4Q9H2S9 585 aa6.08□□□□□ -1.44
GCFC2-209ENST00000486016 ACSS2Q9NR19 701 aa6.08□□□□□ -1.44
GCFC2-209ENST00000486016 SAMD15Q9P1V8 674 aa6.08□□□□□ -1.44
GCFC2-209ENST00000486016 DENND2AQ9ULE3 1009 aa6.08□□□□□ -1.44
GCFC2-209ENST00000486016 CAPN14A8MX76 684 aa6.07□□□□□ -1.44
GCFC2-209ENST00000486016 B4E1Z4 1266 aa6.07□□□□□ -1.44
GCFC2-209ENST00000486016 H2AFYO75367 372 aaKnown RBP6.07□□□□□ -1.44
GCFC2-209ENST00000486016 IGFALSP35858 605 aa6.07□□□□□ -1.44
GCFC2-209ENST00000486016 HHEXQ03014 270 aa6.07□□□□□ -1.44
GCFC2-209ENST00000486016 ROM1Q03395 351 aa6.07□□□□□ -1.44
GCFC2-209ENST00000486016 CREB3L3Q68CJ9 461 aa6.07□□□□□ -1.44
GCFC2-209ENST00000486016 Q6ZPA2 131 aa6.07□□□□□ -1.44
GCFC2-209ENST00000486016 CLEC14AQ86T13 490 aa6.07□□□□□ -1.44
GCFC2-209ENST00000486016 DDX53Q86TM3 631 aaKnown RBP6.07□□□□□ -1.44
GCFC2-209ENST00000486016 LDLRAD3Q86YD5 345 aa6.07□□□□□ -1.44
GCFC2-209ENST00000486016 GFM2Q969S9 779 aaKnown RBP6.07□□□□□ -1.44
GCFC2-209ENST00000486016 E2F7Q96AV8 911 aa6.07□□□□□ -1.44
GCFC2-209ENST00000486016 CEP89Q96ST8 783 aa6.07□□□□□ -1.44
GCFC2-209ENST00000486016 MMRN2Q9H8L6 949 aa6.07□□□□□ -1.44
GCFC2-209ENST00000486016 TNPO3Q9Y5L0 923 aaKnown RBP6.07□□□□□ -1.44
GCFC2-209ENST00000486016 A0A1W2PRX2 142 aa6.06□□□□□ -1.44
GCFC2-209ENST00000486016 PTPDC1A2A3K4 754 aa6.06□□□□□ -1.44
GCFC2-209ENST00000486016 KRT37O76014 449 aa6.06□□□□□ -1.44
GCFC2-209ENST00000486016 ASLP04424 464 aa6.06□□□□□ -1.44
GCFC2-209ENST00000486016 PTX3P26022 381 aaPredicted RBP6.06□□□□□ -1.44
GCFC2-209ENST00000486016 SCNN1GP51170 649 aa6.06□□□□□ -1.44
GCFC2-209ENST00000486016 SLC25A3Q00325 362 aa6.06□□□□□ -1.44
GCFC2-209ENST00000486016 ZNF460Q14592 562 aa6.06□□□□□ -1.44
GCFC2-209ENST00000486016 SLFN12LQ6IEE8 588 aa6.06□□□□□ -1.44
GCFC2-209ENST00000486016 PCSK4Q6UW60 755 aa6.06□□□□□ -1.44
GCFC2-209ENST00000486016 Q6ZRM9 215 aa6.06□□□□□ -1.44
GCFC2-209ENST00000486016 PMFBP1Q8TBY8 1022 aa6.06□□□□□ -1.44
GCFC2-209ENST00000486016 LARP4BQ92615 738 aaKnown RBP6.06□□□□□ -1.44
GCFC2-209ENST00000486016 KANSL2Q9H9L4 492 aa6.06□□□□□ -1.44
GCFC2-209ENST00000486016 KCMF1Q9P0J7 381 aa6.06□□□□□ -1.44
GCFC2-209ENST00000486016 TNFRSF18Q9Y5U5 241 aa6.06□□□□□ -1.44
GCFC2-209ENST00000486016 CYP27B1O15528 508 aa6.05□□□□□ -1.44
GCFC2-209ENST00000486016 PEX11BO96011 259 aa6.05□□□□□ -1.44
GCFC2-209ENST00000486016 CYP17A1P05093 508 aa6.05□□□□□ -1.44
GCFC2-209ENST00000486016 BPIFB4P59827 614 aa6.05□□□□□ -1.44
GCFC2-209ENST00000486016 MYBPC3Q14896 1274 aa6.05□□□□□ -1.44
GCFC2-209ENST00000486016 EPHA7Q15375 998 aa6.05□□□□□ -1.44
GCFC2-209ENST00000486016 DGKDQ16760 1214 aa6.05□□□□□ -1.44
GCFC2-209ENST00000486016 GAGE13Q4V321 117 aa6.05□□□□□ -1.44
GCFC2-209ENST00000486016 TTC38Q5R3I4 469 aa6.05□□□□□ -1.44
GCFC2-209ENST00000486016 GAREM2Q75VX8 874 aa6.05□□□□□ -1.44
GCFC2-209ENST00000486016 ZNF627Q7L945 461 aa6.05□□□□□ -1.44
GCFC2-209ENST00000486016 KANSL1Q7Z3B3 1105 aa6.05□□□□□ -1.44
GCFC2-209ENST00000486016 BMP8AQ7Z5Y6 402 aa6.05□□□□□ -1.44
GCFC2-209ENST00000486016 ANKRD35Q8N283 1001 aa6.05□□□□□ -1.44
GCFC2-209ENST00000486016 ZNF483Q8TF39 744 aaPredicted RBP6.05□□□□□ -1.44
GCFC2-209ENST00000486016 RPL10LQ96L21 214 aaKnown RBP6.05□□□□□ -1.44
GCFC2-209ENST00000486016 OSBPL2Q9H1P3 480 aa6.05□□□□□ -1.44
GCFC2-209ENST00000486016 B4GALT6Q9UBX8 382 aa6.05□□□□□ -1.44
GCFC2-209ENST00000486016 CDK11AQ9UQ88 783 aaPredicted RBP6.05□□□□□ -1.44
GCFC2-209ENST00000486016 RBM8AQ9Y5S9 174 aaKnown RBP6.05□□□□□ -1.44
GCFC2-209ENST00000486016 PCSK5Q92824 1860 aa6.05□□□□□ -1.44
GCFC2-209ENST00000486016 UBA6A0AVT1 1052 aaPredicted RBP6.04□□□□□ -1.44
GCFC2-209ENST00000486016 CBX4O00257 560 aa6.04□□□□□ -1.44
GCFC2-209ENST00000486016 KRT4P19013 534 aa6.04□□□□□ -1.44
GCFC2-209ENST00000486016 SDSP20132 328 aa6.04□□□□□ -1.44
GCFC2-209ENST00000486016 NANOS3P60323 173 aaKnown RBP6.04□□□□□ -1.44
GCFC2-209ENST00000486016 HNRNPA0Q13151 305 aaKnown RBP6.04□□□□□ -1.44
GCFC2-209ENST00000486016 TCIRG1Q13488 830 aa6.04□□□□□ -1.44
GCFC2-209ENST00000486016 ESRP1Q6NXG1 681 aaKnown RBP6.04□□□□□ -1.44
GCFC2-209ENST00000486016 KIAA1958Q8N8K9 716 aa6.04□□□□□ -1.44
GCFC2-209ENST00000486016 ANKRD53Q8N9V6 530 aa6.04□□□□□ -1.44
GCFC2-209ENST00000486016 NEU4Q8WWR8 484 aaPredicted RBP6.04□□□□□ -1.44
GCFC2-209ENST00000486016 MIEF2Q96C03 454 aa6.04□□□□□ -1.44
GCFC2-209ENST00000486016 PITHD1Q9GZP4 211 aaPredicted RBP6.04□□□□□ -1.44
GCFC2-209ENST00000486016 PARPBPQ9NWS1 579 aa6.04□□□□□ -1.44
GCFC2-209ENST00000486016 UBE2QL1A1L167 161 aa6.03□□□□□ -1.44
GCFC2-209ENST00000486016 RABGGTBP53611 331 aa6.03□□□□□ -1.44
GCFC2-209ENST00000486016 INHBCP55103 352 aa6.03□□□□□ -1.44
GCFC2-209ENST00000486016 TOB2Q14106 344 aaPredicted RBP6.03□□□□□ -1.44
GCFC2-209ENST00000486016 C1QL3Q5VWW1 255 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms