RNA–Protein interactions for RNA: ENST00000485871.1

SND1-212, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-212ENST00000485871 EMC2Q15006 297 aa12.52□□□□□ -0.41
SND1-212ENST00000485871 CT47A1Q5JQC4 288 aaPredicted RBP12.52□□□□□ -0.41
SND1-212ENST00000485871 ZNF484Q5JVG2 852 aa12.52□□□□□ -0.41
SND1-212ENST00000485871 ADSSL1Q8N142 457 aa12.52□□□□□ -0.41
SND1-212ENST00000485871 MCPH1Q8NEM0 835 aa12.52□□□□□ -0.41
SND1-212ENST00000485871 SH3TC2Q8TF17 1288 aa12.52□□□□□ -0.41
SND1-212ENST00000485871 TRAPPC12Q8WVT3 735 aa12.52□□□□□ -0.41
SND1-212ENST00000485871 BSNDQ8WZ55 320 aa12.52□□□□□ -0.41
SND1-212ENST00000485871 KCNN1Q92952 543 aa12.52□□□□□ -0.41
SND1-212ENST00000485871 CCDC47Q96A33 483 aaKnown RBP12.52□□□□□ -0.41
SND1-212ENST00000485871 CCDC43Q96MW1 224 aaKnown RBP12.52□□□□□ -0.41
SND1-212ENST00000485871 GTPBP4Q9BZE4 634 aaKnown RBP12.52□□□□□ -0.41
SND1-212ENST00000485871 ATP6V0A4Q9HBG4 840 aa12.52□□□□□ -0.41
SND1-212ENST00000485871 PARVGQ9HBI0 331 aa12.52□□□□□ -0.41
SND1-212ENST00000485871 CBX8Q9HC52 389 aa12.52□□□□□ -0.41
SND1-212ENST00000485871 HMX1Q9NP08 348 aaPredicted RBP12.52□□□□□ -0.41
SND1-212ENST00000485871 SLC39A2Q9NP94 309 aa12.52□□□□□ -0.41
SND1-212ENST00000485871 XPNPEP3Q9NQH7 507 aa12.52□□□□□ -0.41
SND1-212ENST00000485871 ZNF215Q9UL58 517 aaPredicted RBP12.52□□□□□ -0.41
SND1-212ENST00000485871 COL4A3BPQ9Y5P4 624 aa12.52□□□□□ -0.41
SND1-212ENST00000485871 CEP290O15078 2479 aa12.51□□□□□ -0.41
SND1-212ENST00000485871 MSCO60682 206 aa12.51□□□□□ -0.41
SND1-212ENST00000485871 KPNA6O60684 536 aa12.51□□□□□ -0.41
SND1-212ENST00000485871 C22orf31O95567 290 aa12.51□□□□□ -0.41
SND1-212ENST00000485871 PTMAP06454 111 aaKnown RBP12.51□□□□□ -0.41
SND1-212ENST00000485871 C6orf222P0C671 652 aaPredicted RBP12.51□□□□□ -0.41
SND1-212ENST00000485871 MAPTP10636 758 aaKnown RBP12.51□□□□□ -0.41
SND1-212ENST00000485871 PLS3P13797 630 aa12.51□□□□□ -0.41
SND1-212ENST00000485871 ERCC5P28715 1186 aaPredicted RBP12.51□□□□□ -0.41
SND1-212ENST00000485871 HOXD13P35453 343 aa12.51□□□□□ -0.41
SND1-212ENST00000485871 ARL2P36404 184 aa12.51□□□□□ -0.41
SND1-212ENST00000485871 PSEN2P49810 448 aa12.51□□□□□ -0.41
SND1-212ENST00000485871 DRP2Q13474 957 aa12.51□□□□□ -0.41
SND1-212ENST00000485871 HIC1Q14526 733 aa12.51□□□□□ -0.41
SND1-212ENST00000485871 BMT2Q1RMZ1 405 aa12.51□□□□□ -0.41
SND1-212ENST00000485871 HERC4Q5GLZ8 1057 aaPredicted RBP12.51□□□□□ -0.41
SND1-212ENST00000485871 MARCH8Q5T0T0 291 aa12.51□□□□□ -0.41
SND1-212ENST00000485871 MAEAQ7L5Y9 396 aa12.51□□□□□ -0.41
SND1-212ENST00000485871 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.51□□□□□ -0.41
SND1-212ENST00000485871 DHX40Q8IX18 779 aaKnown RBP12.51□□□□□ -0.41
SND1-212ENST00000485871 GUF1Q8N442 669 aaKnown RBP12.51□□□□□ -0.41
SND1-212ENST00000485871 SCFD1Q8WVM8 642 aa12.51□□□□□ -0.41
SND1-212ENST00000485871 ST6GALNAC4Q9H4F1 302 aa12.51□□□□□ -0.41
SND1-212ENST00000485871 TBC1D7Q9P0N9 293 aa12.51□□□□□ -0.41
SND1-212ENST00000485871 TRPC6Q9Y210 931 aa12.51□□□□□ -0.41
SND1-212ENST00000485871 GOLGA6L19H0YKK7 550 aa12.5□□□□□ -0.41
SND1-212ENST00000485871 GAS2O43903 313 aaKnown RBP12.5□□□□□ -0.41
SND1-212ENST00000485871 ADCY5O95622 1261 aa12.5□□□□□ -0.41
SND1-212ENST00000485871 MYL3P08590 195 aa12.5□□□□□ -0.41
SND1-212ENST00000485871 MYBP10242 640 aa12.5□□□□□ -0.41
SND1-212ENST00000485871 NMT1P30419 496 aaKnown RBP12.5□□□□□ -0.41
SND1-212ENST00000485871 PPP1R2P41236 205 aa12.5□□□□□ -0.41
SND1-212ENST00000485871 POLGP54098 1239 aaPredicted RBP12.5□□□□□ -0.41
SND1-212ENST00000485871 PMS1P54277 932 aaKnown RBP12.5□□□□□ -0.41
SND1-212ENST00000485871 NCKAP1LP55160 1127 aa12.5□□□□□ -0.41
SND1-212ENST00000485871 TBC1D8BQ0IIM8 1120 aa12.5□□□□□ -0.41
SND1-212ENST00000485871 MFSD10Q14728 455 aa12.5□□□□□ -0.41
SND1-212ENST00000485871 LRRC41Q15345 812 aa12.5□□□□□ -0.41
SND1-212ENST00000485871 KIAA0753Q2KHM9 967 aa12.5□□□□□ -0.41
SND1-212ENST00000485871 BRDTQ58F21 947 aaPredicted RBP12.5□□□□□ -0.41
SND1-212ENST00000485871 GNASQ5JWF2 1037 aa12.5□□□□□ -0.41
SND1-212ENST00000485871 LUZP1Q86V48 1076 aa12.5□□□□□ -0.41
SND1-212ENST00000485871 ASAP3Q8TDY4 903 aa12.5□□□□□ -0.41
SND1-212ENST00000485871 KIFAP3Q92845 792 aa12.5□□□□□ -0.41
SND1-212ENST00000485871 ZBTB10Q96DT7 871 aa12.5□□□□□ -0.41
SND1-212ENST00000485871 DRC1Q96MC2 740 aa12.5□□□□□ -0.41
SND1-212ENST00000485871 NTPCRQ9BSD7 190 aaKnown RBP12.5□□□□□ -0.41
SND1-212ENST00000485871 MTG1Q9BT17 334 aaPredicted RBP12.5□□□□□ -0.41
SND1-212ENST00000485871 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.5□□□□□ -0.41
SND1-212ENST00000485871 UNC93B1Q9H1C4 597 aa12.5□□□□□ -0.41
SND1-212ENST00000485871 POLR3FQ9H1D9 316 aaPredicted RBP12.5□□□□□ -0.41
SND1-212ENST00000485871 HSD3B7Q9H2F3 369 aa12.5□□□□□ -0.41
SND1-212ENST00000485871 ZHX3Q9H4I2 956 aa12.5□□□□□ -0.41
SND1-212ENST00000485871 C17orf75Q9HAS0 396 aa12.5□□□□□ -0.41
SND1-212ENST00000485871 PAK6Q9NQU5 681 aaPredicted RBP12.5□□□□□ -0.41
SND1-212ENST00000485871 LARSQ9P2J5 1176 aaKnown RBP12.5□□□□□ -0.41
SND1-212ENST00000485871 DACH1Q9UI36 760 aa12.5□□□□□ -0.41
SND1-212ENST00000485871 MAPK8IP1Q9UQF2 711 aa12.5□□□□□ -0.41
SND1-212ENST00000485871 SZT2Q5T011 3432 aa12.5□□□□□ -0.41
SND1-212ENST00000485871 ZMYM2Q9UBW7 1377 aa12.49□□□□□ -0.41
SND1-212ENST00000485871 ADGRA3Q8IWK6 1321 aa12.49□□□□□ -0.41
SND1-212ENST00000485871 MBLAC1A4D2B0 266 aaPredicted RBP12.49□□□□□ -0.41
SND1-212ENST00000485871 IKBKBO14920 756 aa12.49□□□□□ -0.41
SND1-212ENST00000485871 EIF3DO15371 548 aaKnown RBP eCLIP12.49□□□□□ -0.41
SND1-212ENST00000485871 SMIM10L2AP0DMW4 78 aa12.49□□□□□ -0.41
SND1-212ENST00000485871 SMIM10L2BP0DMW5 78 aa12.49□□□□□ -0.41
SND1-212ENST00000485871 GLRA2P23416 452 aa12.49□□□□□ -0.41
SND1-212ENST00000485871 CCNE1P24864 410 aa12.49□□□□□ -0.41
SND1-212ENST00000485871 KLRC1P26715 233 aa12.49□□□□□ -0.41
SND1-212ENST00000485871 PPFIA1Q13136 1202 aa12.49□□□□□ -0.41
SND1-212ENST00000485871 MTFR1Q15390 333 aa12.49□□□□□ -0.41
SND1-212ENST00000485871 GRIK4Q16099 956 aa12.49□□□□□ -0.41
SND1-212ENST00000485871 ZCWPW2Q504Y3 356 aa12.49□□□□□ -0.41
SND1-212ENST00000485871 ODR4Q5SWX8 454 aa12.49□□□□□ -0.41
SND1-212ENST00000485871 FAM102BQ5T8I3 360 aa12.49□□□□□ -0.41
SND1-212ENST00000485871 CENPPQ6IPU0 288 aa12.49□□□□□ -0.41
SND1-212ENST00000485871 TTI2Q6NXR4 508 aa12.49□□□□□ -0.41
SND1-212ENST00000485871 FOXR2Q6PJQ5 311 aa12.49□□□□□ -0.41
SND1-212ENST00000485871 ZNF720Q7Z2F6 126 aa12.49□□□□□ -0.41
SND1-212ENST00000485871 FAM178BQ8IXR5 827 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms