RNA–Protein interactions for RNA: ENST00000485749.1

RTN4-213, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 832 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-213ENST00000485749 TCIRG1Q13488 830 aa5.13□□□□□ -1.59
RTN4-213ENST00000485749 PSMD6Q15008 389 aa5.13□□□□□ -1.59
RTN4-213ENST00000485749 ELF2Q15723 593 aa5.13□□□□□ -1.59
RTN4-213ENST00000485749 MUM1Q2TAK8 710 aa5.13□□□□□ -1.59
RTN4-213ENST00000485749 ABHD17CQ6PCB6 329 aa5.13□□□□□ -1.59
RTN4-213ENST00000485749 C4orf50Q6ZRC1 276 aa5.13□□□□□ -1.59
RTN4-213ENST00000485749 TOGARAM2Q6ZUX3 1019 aa5.13□□□□□ -1.59
RTN4-213ENST00000485749 USP53Q70EK8 1073 aa5.13□□□□□ -1.59
RTN4-213ENST00000485749 PNMA8AQ86V59 439 aaPredicted RBP5.13□□□□□ -1.59
RTN4-213ENST00000485749 TAX1BP1Q86VP1 789 aa5.13□□□□□ -1.59
RTN4-213ENST00000485749 LRRC56Q8IYG6 542 aaPredicted RBP5.13□□□□□ -1.59
RTN4-213ENST00000485749 FIBCD1Q8N539 461 aa5.13□□□□□ -1.59
RTN4-213ENST00000485749 NGEFQ8N5V2 710 aa5.13□□□□□ -1.59
RTN4-213ENST00000485749 MSANTD4Q8NCY6 345 aa5.13□□□□□ -1.59
RTN4-213ENST00000485749 ATXN2LQ8WWM7 1075 aaKnown RBP5.13□□□□□ -1.59
RTN4-213ENST00000485749 IPCEF1Q8WWN9 437 aaPredicted RBP5.13□□□□□ -1.59
RTN4-213ENST00000485749 CCT6BQ92526 530 aa5.13□□□□□ -1.59
RTN4-213ENST00000485749 TAF4BQ92750 862 aa5.13□□□□□ -1.59
RTN4-213ENST00000485749 BRF1Q92994 677 aa5.13□□□□□ -1.59
RTN4-213ENST00000485749 TEKT1Q969V4 418 aa5.13□□□□□ -1.59
RTN4-213ENST00000485749 HVCN1Q96D96 273 aa5.13□□□□□ -1.59
RTN4-213ENST00000485749 AHCYL2Q96HN2 611 aaKnown RBP5.13□□□□□ -1.59
RTN4-213ENST00000485749 CENPOQ9BU64 300 aa5.13□□□□□ -1.59
RTN4-213ENST00000485749 PRKRIP1Q9H875 184 aaPredicted RBP5.13□□□□□ -1.59
RTN4-213ENST00000485749 EMC7Q9NPA0 242 aa5.13□□□□□ -1.59
RTN4-213ENST00000485749 PRDM7Q9NQW5 492 aa5.13□□□□□ -1.59
RTN4-213ENST00000485749 GPR27Q9NS67 375 aa5.13□□□□□ -1.59
RTN4-213ENST00000485749 SMC4Q9NTJ3 1288 aa5.13□□□□□ -1.59
RTN4-213ENST00000485749 TRMT1Q9NXH9 659 aaKnown RBP5.13□□□□□ -1.59
RTN4-213ENST00000485749 ARHGAP28Q9P2N2 729 aa5.13□□□□□ -1.59
RTN4-213ENST00000485749 CEP83Q9Y592 693 aa5.13□□□□□ -1.59
RTN4-213ENST00000485749 SLC4A7Q9Y6M7 1214 aa5.13□□□□□ -1.59
RTN4-213ENST00000485749 TRIM75PA6NK02 468 aa5.12□□□□□ -1.59
RTN4-213ENST00000485749 ZNF891A8MT65 544 aaPredicted RBP5.12□□□□□ -1.59
RTN4-213ENST00000485749 F5H423 210 aaPredicted RBP5.12□□□□□ -1.59
RTN4-213ENST00000485749 TRAF5O00463 557 aa5.12□□□□□ -1.59
RTN4-213ENST00000485749 GSTA4O15217 222 aa5.12□□□□□ -1.59
RTN4-213ENST00000485749 LTFP02788 710 aa5.12□□□□□ -1.59
RTN4-213ENST00000485749 PF4V1P10720 104 aa5.12□□□□□ -1.59
RTN4-213ENST00000485749 CYP7A1P22680 504 aa5.12□□□□□ -1.59
RTN4-213ENST00000485749 SERPINB3P29508 390 aa5.12□□□□□ -1.59
RTN4-213ENST00000485749 HSPA4P34932 840 aa5.12□□□□□ -1.59
RTN4-213ENST00000485749 GDNFP39905 211 aa5.12□□□□□ -1.59
RTN4-213ENST00000485749 ECI1P42126 302 aa5.12□□□□□ -1.59
RTN4-213ENST00000485749 ZNF280AP59817 542 aaPredicted RBP5.12□□□□□ -1.59
RTN4-213ENST00000485749 BPIFB3P59826 476 aa5.12□□□□□ -1.59
RTN4-213ENST00000485749 PFKPQ01813 784 aa5.12□□□□□ -1.59
RTN4-213ENST00000485749 POU4F1Q01851 419 aa5.12□□□□□ -1.59
RTN4-213ENST00000485749 CYP4F3Q08477 520 aa5.12□□□□□ -1.59
RTN4-213ENST00000485749 KRT72Q14CN4 511 aa5.12□□□□□ -1.59
RTN4-213ENST00000485749 PPP2R5BQ15173 497 aa5.12□□□□□ -1.59
RTN4-213ENST00000485749 SAFBQ15424 915 aaKnown RBP eCLIP5.12□□□□□ -1.59
RTN4-213ENST00000485749 ARHGAP44Q17R89 818 aa5.12□□□□□ -1.59
RTN4-213ENST00000485749 NKPD1Q17RQ9 610 aa5.12□□□□□ -1.59
RTN4-213ENST00000485749 METTL24Q5JXM2 366 aa5.12□□□□□ -1.59
RTN4-213ENST00000485749 GPR158Q5T848 1215 aa5.12□□□□□ -1.59
RTN4-213ENST00000485749 MEX3CQ5U5Q3 659 aaKnown RBP5.12□□□□□ -1.59
RTN4-213ENST00000485749 AGAP9Q5VTM2 703 aa5.12□□□□□ -1.59
RTN4-213ENST00000485749 E4F1Q66K89 784 aaPredicted RBP5.12□□□□□ -1.59
RTN4-213ENST00000485749 FAAH2Q6GMR7 532 aa5.12□□□□□ -1.59
RTN4-213ENST00000485749 CCDC129Q6ZRS4 1044 aa5.12□□□□□ -1.59
RTN4-213ENST00000485749 C22orf34Q6ZV56 151 aa5.12□□□□□ -1.59
RTN4-213ENST00000485749 FAM214BQ7L5A3 538 aa5.12□□□□□ -1.59
RTN4-213ENST00000485749 RASGRP2Q7LDG7 609 aa5.12□□□□□ -1.59
RTN4-213ENST00000485749 UBE3DQ7Z6J8 389 aa5.12□□□□□ -1.59
RTN4-213ENST00000485749 MTERF4Q7Z6M4 381 aaKnown RBP5.12□□□□□ -1.59
RTN4-213ENST00000485749 DZIP1Q86YF9 867 aaKnown RBP5.12□□□□□ -1.59
RTN4-213ENST00000485749 TPH2Q8IWU9 490 aa5.12□□□□□ -1.59
RTN4-213ENST00000485749 NXPE1Q8N323 547 aa5.12□□□□□ -1.59
RTN4-213ENST00000485749 CHST14Q8NCH0 376 aa5.12□□□□□ -1.59
RTN4-213ENST00000485749 NAXEQ8NCW5 288 aa5.12□□□□□ -1.59
RTN4-213ENST00000485749 C1orf162Q8NEQ5 155 aaPredicted RBP5.12□□□□□ -1.59
RTN4-213ENST00000485749 GABPB2Q8TAK5 448 aaPredicted RBP5.12□□□□□ -1.59
RTN4-213ENST00000485749 PANK1Q8TE04 598 aa5.12□□□□□ -1.59
RTN4-213ENST00000485749 GIMAP1Q8WWP7 306 aa5.12□□□□□ -1.59
RTN4-213ENST00000485749 COPS5Q92905 334 aa5.12□□□□□ -1.59
RTN4-213ENST00000485749 CLIP3Q96DZ5 547 aa5.12□□□□□ -1.59
RTN4-213ENST00000485749 FAXDC2Q96IV6 333 aa5.12□□□□□ -1.59
RTN4-213ENST00000485749 NOL6Q9H6R4 1146 aaKnown RBP5.12□□□□□ -1.59
RTN4-213ENST00000485749 CYP4F11Q9HBI6 524 aa5.12□□□□□ -1.59
RTN4-213ENST00000485749 NLRC4Q9NPP4 1024 aa5.12□□□□□ -1.59
RTN4-213ENST00000485749 MAN1C1Q9NR34 630 aa5.12□□□□□ -1.59
RTN4-213ENST00000485749 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.12□□□□□ -1.59
RTN4-213ENST00000485749 STK26Q9P289 416 aa5.12□□□□□ -1.59
RTN4-213ENST00000485749 GTF3C4Q9UKN8 822 aa5.12□□□□□ -1.59
RTN4-213ENST00000485749 PA2G4Q9UQ80 394 aaKnown RBP5.12□□□□□ -1.59
RTN4-213ENST00000485749 DMTF1Q9Y222 760 aa5.12□□□□□ -1.59
RTN4-213ENST00000485749 PCDHA8Q9Y5H6 950 aa5.12□□□□□ -1.59
RTN4-213ENST00000485749 MRFAP1Q9Y605 127 aa5.12□□□□□ -1.59
RTN4-213ENST00000485749 U3KQE9 123 aa5.12□□□□□ -1.59
RTN4-213ENST00000485749 EEA1Q15075 1411 aa5.12□□□□□ -1.59
RTN4-213ENST00000485749 MBD4O95243 580 aa5.11□□□□□ -1.59
RTN4-213ENST00000485749 CKMP06732 381 aa5.11□□□□□ -1.59
RTN4-213ENST00000485749 IFIT1P09914 478 aaKnown RBP5.11□□□□□ -1.59
RTN4-213ENST00000485749 TMEM253P0C7T8 217 aa5.11□□□□□ -1.59
RTN4-213ENST00000485749 ZSCAN22P10073 491 aaPredicted RBP5.11□□□□□ -1.59
RTN4-213ENST00000485749 KRT10P13645 584 aa5.11□□□□□ -1.59
RTN4-213ENST00000485749 GLULP15104 373 aa5.11□□□□□ -1.59
RTN4-213ENST00000485749 XBP1P17861 261 aa5.11□□□□□ -1.59
RTN4-213ENST00000485749 LPOP22079 712 aaPredicted RBP5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms