RNA–Protein interactions for RNA: ENST00000485628.2

APOE-205, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-205ENST00000485628 STRA6Q9BX79 667 aa17.56■□□□□ 0.4
APOE-205ENST00000485628 SENP6Q9GZR1 1112 aaPredicted RBP17.56■□□□□ 0.4
APOE-205ENST00000485628 C17orf75Q9HAS0 396 aa17.56■□□□□ 0.4
APOE-205ENST00000485628 GPRC5CQ9NQ84 441 aa17.56■□□□□ 0.4
APOE-205ENST00000485628 GLRA2P23416 452 aa17.55■□□□□ 0.4
APOE-205ENST00000485628 IGBP1P78318 339 aa17.55■□□□□ 0.4
APOE-205ENST00000485628 POU5F1BQ06416 359 aa17.55■□□□□ 0.4
APOE-205ENST00000485628 RBL2Q08999 1139 aa17.55■□□□□ 0.4
APOE-205ENST00000485628 LRRC71Q8N4P6 559 aa17.55■□□□□ 0.4
APOE-205ENST00000485628 RETREG2Q8NC44 543 aa17.55■□□□□ 0.4
APOE-205ENST00000485628 TCP11Q8WWU5 503 aa17.55■□□□□ 0.4
APOE-205ENST00000485628 BSNDQ8WZ55 320 aa17.55■□□□□ 0.4
APOE-205ENST00000485628 DHX38Q92620 1227 aaKnown RBP17.55■□□□□ 0.4
APOE-205ENST00000485628 ERCC4Q92889 916 aaPredicted RBP17.55■□□□□ 0.4
APOE-205ENST00000485628 WNT8BQ93098 351 aa17.55■□□□□ 0.4
APOE-205ENST00000485628 TMEM143Q96AN5 459 aa17.55■□□□□ 0.4
APOE-205ENST00000485628 CCDC34Q96HJ3 373 aa17.55■□□□□ 0.4
APOE-205ENST00000485628 PAWRQ96IZ0 340 aaKnown RBP17.55■□□□□ 0.4
APOE-205ENST00000485628 TOX2Q96NM4 488 aa17.55■□□□□ 0.4
APOE-205ENST00000485628 POLD4Q9HCU8 107 aa17.55■□□□□ 0.4
APOE-205ENST00000485628 OLFML3Q9NRN5 406 aa17.55■□□□□ 0.4
APOE-205ENST00000485628 BMP2KQ9NSY1 1161 aaPredicted RBP17.55■□□□□ 0.4
APOE-205ENST00000485628 HOOK1Q9UJC3 728 aaKnown RBP17.55■□□□□ 0.4
APOE-205ENST00000485628 B4GALT4O60513 344 aa17.54■□□□□ 0.4
APOE-205ENST00000485628 RPN1P04843 607 aaKnown RBP17.54■□□□□ 0.4
APOE-205ENST00000485628 PLS3P13797 630 aa17.54■□□□□ 0.4
APOE-205ENST00000485628 BMP6P22004 513 aa17.54■□□□□ 0.4
APOE-205ENST00000485628 CACNB1Q02641 598 aaPredicted RBP17.54■□□□□ 0.4
APOE-205ENST00000485628 COASYQ13057 564 aa17.54■□□□□ 0.4
APOE-205ENST00000485628 PTK7Q13308 1070 aa17.54■□□□□ 0.4
APOE-205ENST00000485628 KMT5BQ4FZB7 885 aa17.54■□□□□ 0.4
APOE-205ENST00000485628 CAVIN1Q6NZI2 390 aaKnown RBP17.54■□□□□ 0.4
APOE-205ENST00000485628 TAF2Q6P1X5 1199 aa17.54■□□□□ 0.4
APOE-205ENST00000485628 IFNLR1Q8IU57 520 aaPredicted RBP17.54■□□□□ 0.4
APOE-205ENST00000485628 NME8Q8N427 588 aa17.54■□□□□ 0.4
APOE-205ENST00000485628 ASAP3Q8TDY4 903 aa17.54■□□□□ 0.4
APOE-205ENST00000485628 SPIRE2Q8WWL2 714 aa17.54■□□□□ 0.4
APOE-205ENST00000485628 PRPF31Q8WWY3 499 aaKnown RBP17.54■□□□□ 0.4
APOE-205ENST00000485628 ABHD8Q96I13 439 aa17.54■□□□□ 0.4
APOE-205ENST00000485628 DRC1Q96MC2 740 aa17.54■□□□□ 0.4
APOE-205ENST00000485628 ST6GALNAC4Q9H4F1 302 aa17.54■□□□□ 0.4
APOE-205ENST00000485628 PANK4Q9NVE7 773 aa17.54■□□□□ 0.4
APOE-205ENST00000485628 SEL1LQ9UBV2 794 aa17.54■□□□□ 0.4
APOE-205ENST00000485628 COL4A3BPQ9Y5P4 624 aa17.54■□□□□ 0.4
APOE-205ENST00000485628 SFI1A8K8P3 1242 aa17.53■□□□□ 0.4
APOE-205ENST00000485628 ASAP2O43150 1006 aa17.53■□□□□ 0.4
APOE-205ENST00000485628 GPR32O75388 356 aa17.53■□□□□ 0.4
APOE-205ENST00000485628 PPP1R37O75864 691 aa17.53■□□□□ 0.4
APOE-205ENST00000485628 MAPTP10636 758 aaKnown RBP17.53■□□□□ 0.4
APOE-205ENST00000485628 GAP43P17677 238 aa17.53■□□□□ 0.4
APOE-205ENST00000485628 CLCN3P51790 818 aa17.53■□□□□ 0.4
APOE-205ENST00000485628 ASIC1P78348 528 aa17.53■□□□□ 0.4
APOE-205ENST00000485628 RAD51AP2Q09MP3 1159 aa17.53■□□□□ 0.4
APOE-205ENST00000485628 MORC3Q14149 939 aa17.53■□□□□ 0.4
APOE-205ENST00000485628 MXD4Q14582 209 aaPredicted RBP17.53■□□□□ 0.4
APOE-205ENST00000485628 PTGISQ16647 500 aa17.53■□□□□ 0.4
APOE-205ENST00000485628 ZNF710Q8N1W2 664 aa17.53■□□□□ 0.4
APOE-205ENST00000485628 VTI1AQ96AJ9 217 aa17.53■□□□□ 0.4
APOE-205ENST00000485628 CCDC43Q96MW1 224 aaKnown RBP17.53■□□□□ 0.4
APOE-205ENST00000485628 NFKBIZQ9BYH8 718 aa17.53■□□□□ 0.4
APOE-205ENST00000485628 POLR3FQ9H1D9 316 aaPredicted RBP17.53■□□□□ 0.4
APOE-205ENST00000485628 ADAMTS10Q9H324 1103 aa17.53■□□□□ 0.4
APOE-205ENST00000485628 C11orf49Q9H6J7 331 aa17.53■□□□□ 0.4
APOE-205ENST00000485628 SUGCTQ9HAC7 445 aa17.53■□□□□ 0.4
APOE-205ENST00000485628 PARVGQ9HBI0 331 aa17.53■□□□□ 0.4
APOE-205ENST00000485628 TRMT13Q9NUP7 481 aaKnown RBP17.53■□□□□ 0.4
APOE-205ENST00000485628 SUCLA2Q9P2R7 463 aaPredicted RBP17.53■□□□□ 0.4
APOE-205ENST00000485628 CYP2C9P11712 490 aa17.52■□□□□ 0.4
APOE-205ENST00000485628 TMOD1P28289 359 aa17.52■□□□□ 0.4
APOE-205ENST00000485628 NCKAP1LP55160 1127 aa17.52■□□□□ 0.4
APOE-205ENST00000485628 LAMTOR4Q0VGL1 99 aa17.52■□□□□ 0.4
APOE-205ENST00000485628 PSMD2Q13200 908 aa17.52■□□□□ 0.4
APOE-205ENST00000485628 CAPSQ13938 189 aa17.52■□□□□ 0.4
APOE-205ENST00000485628 COBLL1Q53SF7 1204 aa17.52■□□□□ 0.4
APOE-205ENST00000485628 FAM26DQ5JW98 314 aa17.52■□□□□ 0.4
APOE-205ENST00000485628 FAM102BQ5T8I3 360 aa17.52■□□□□ 0.4
APOE-205ENST00000485628 CDCA2Q69YH5 1023 aaPredicted RBP17.52■□□□□ 0.4
APOE-205ENST00000485628 TRAF7Q6Q0C0 670 aa17.52■□□□□ 0.4
APOE-205ENST00000485628 EPM2AIP1Q7L775 607 aaPredicted RBP17.52■□□□□ 0.4
APOE-205ENST00000485628 NECAB2Q7Z6G3 386 aa17.52■□□□□ 0.4
APOE-205ENST00000485628 CCDC65Q8IXS2 484 aa17.52■□□□□ 0.4
APOE-205ENST00000485628 PSPC1Q8WXF1 523 aaKnown RBP17.52■□□□□ 0.4
APOE-205ENST00000485628 SMARCE1Q969G3 411 aa17.52■□□□□ 0.4
APOE-205ENST00000485628 SYAP1Q96A49 352 aaPredicted RBP17.52■□□□□ 0.4
APOE-205ENST00000485628 FUCA2Q9BTY2 467 aa17.52■□□□□ 0.4
APOE-205ENST00000485628 TRPV6Q9H1D0 765 aa17.52■□□□□ 0.4
APOE-205ENST00000485628 IFT122Q9HBG6 1241 aa17.52■□□□□ 0.4
APOE-205ENST00000485628 ARHGAP28Q9P2N2 729 aa17.52■□□□□ 0.4
APOE-205ENST00000485628 MAN1B1Q9UKM7 699 aa17.52■□□□□ 0.4
APOE-205ENST00000485628 SIP14410 1827 aa17.51■□□□□ 0.39
APOE-205ENST00000485628 MROH7Q68CQ1 1323 aa17.51■□□□□ 0.39
APOE-205ENST00000485628 ADGRA3Q8IWK6 1321 aa17.51■□□□□ 0.39
APOE-205ENST00000485628 ALPK3Q96L96 1907 aa17.51■□□□□ 0.39
APOE-205ENST00000485628 CAND2O75155 1236 aa17.51■□□□□ 0.39
APOE-205ENST00000485628 SMC2O95347 1197 aa17.51■□□□□ 0.39
APOE-205ENST00000485628 RPLP2P05387 115 aaKnown RBP17.51■□□□□ 0.39
APOE-205ENST00000485628 NAMPTP43490 491 aa17.51■□□□□ 0.39
APOE-205ENST00000485628 NPTX2P47972 431 aa17.51■□□□□ 0.39
APOE-205ENST00000485628 DNM2P50570 870 aa17.51■□□□□ 0.39
APOE-205ENST00000485628 CHMP4BP1P59074 171 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms