RNA–Protein interactions for RNA: ENST00000485063.1

MACF1-220, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-220ENST00000485063 NLRP7Q8WX94 980 aa8.73□□□□□ -1.01
MACF1-220ENST00000485063 MTRQ99707 1265 aa8.73□□□□□ -1.01
MACF1-220ENST00000485063 HSD17B14Q9BPX1 270 aa8.73□□□□□ -1.01
MACF1-220ENST00000485063 SH2D3AQ9BRG2 576 aa8.73□□□□□ -1.01
MACF1-220ENST00000485063 POLR3CQ9BUI4 534 aaPredicted RBP8.73□□□□□ -1.01
MACF1-220ENST00000485063 FTHL17Q9BXU8 183 aa8.73□□□□□ -1.01
MACF1-220ENST00000485063 INO80BQ9C086 356 aaPredicted RBP8.73□□□□□ -1.01
MACF1-220ENST00000485063 ANKEF1Q9NU02 776 aa8.73□□□□□ -1.01
MACF1-220ENST00000485063 CXXC1Q9P0U4 656 aaPredicted RBP8.73□□□□□ -1.01
MACF1-220ENST00000485063 TMEM265A0A087WTH1 108 aa8.72□□□□□ -1.01
MACF1-220ENST00000485063 TMEM150BA6NC51 233 aa8.72□□□□□ -1.01
MACF1-220ENST00000485063 C2orf72A6NCS6 295 aa8.72□□□□□ -1.01
MACF1-220ENST00000485063 ASAP2O43150 1006 aa8.72□□□□□ -1.01
MACF1-220ENST00000485063 DGAT1O75907 488 aa8.72□□□□□ -1.01
MACF1-220ENST00000485063 STBD1O95210 358 aa8.72□□□□□ -1.01
MACF1-220ENST00000485063 LYPLA2O95372 231 aa8.72□□□□□ -1.01
MACF1-220ENST00000485063 DNAJB2P25686 324 aa8.72□□□□□ -1.01
MACF1-220ENST00000485063 RPA1P27694 616 aa8.72□□□□□ -1.01
MACF1-220ENST00000485063 CCT6AP40227 531 aaKnown RBP8.72□□□□□ -1.01
MACF1-220ENST00000485063 NPEPPSP55786 919 aa8.72□□□□□ -1.01
MACF1-220ENST00000485063 NLRP11P59045 1033 aaKnown RBP8.72□□□□□ -1.01
MACF1-220ENST00000485063 LSM11P83369 360 aaKnown RBP eCLIP8.72□□□□□ -1.01
MACF1-220ENST00000485063 ATP2C1P98194 919 aaPredicted RBP8.72□□□□□ -1.01
MACF1-220ENST00000485063 NFX1Q12986 1120 aaKnown RBP8.72□□□□□ -1.01
MACF1-220ENST00000485063 LPIN1Q14693 890 aa8.72□□□□□ -1.01
MACF1-220ENST00000485063 GPNMBQ14956 572 aa8.72□□□□□ -1.01
MACF1-220ENST00000485063 KIZQ2M2Z5 673 aa8.72□□□□□ -1.01
MACF1-220ENST00000485063 ARL6IP4Q66PJ3 421 aaKnown RBP8.72□□□□□ -1.01
MACF1-220ENST00000485063 FAM109BQ6ICB4 259 aaPredicted RBP8.72□□□□□ -1.01
MACF1-220ENST00000485063 CATSPER3Q86XQ3 398 aa8.72□□□□□ -1.01
MACF1-220ENST00000485063 RHPN2Q8IUC4 686 aa8.72□□□□□ -1.01
MACF1-220ENST00000485063 MYOCDQ8IZQ8 938 aa8.72□□□□□ -1.01
MACF1-220ENST00000485063 C4orf32Q8N8J7 132 aa8.72□□□□□ -1.01
MACF1-220ENST00000485063 SNX29Q8TEQ0 813 aa8.72□□□□□ -1.01
MACF1-220ENST00000485063 TIFAQ96CG3 184 aa8.72□□□□□ -1.01
MACF1-220ENST00000485063 NACC1Q96RE7 527 aa8.72□□□□□ -1.01
MACF1-220ENST00000485063 PPP1R16BQ96T49 567 aa8.72□□□□□ -1.01
MACF1-220ENST00000485063 GCOM2Q9BZD3 368 aaPredicted RBP8.72□□□□□ -1.01
MACF1-220ENST00000485063 SLC28A3Q9HAS3 691 aa8.72□□□□□ -1.01
MACF1-220ENST00000485063 PCDHA11Q9Y5I1 949 aa8.72□□□□□ -1.01
MACF1-220ENST00000485063 MYH15Q9Y2K3 1946 aa8.72□□□□□ -1.01
MACF1-220ENST00000485063 IGKV6-21A0A0C4DH24 114 aa8.71□□□□□ -1.02
MACF1-220ENST00000485063 DENND3A2RUS2 1198 aa8.71□□□□□ -1.02
MACF1-220ENST00000485063 VWA3AA6NCI4 1184 aa8.71□□□□□ -1.02
MACF1-220ENST00000485063 GRXCR1A8MXD5 290 aa8.71□□□□□ -1.02
MACF1-220ENST00000485063 TLL1O43897 1013 aa8.71□□□□□ -1.02
MACF1-220ENST00000485063 GPR32O75388 356 aa8.71□□□□□ -1.02
MACF1-220ENST00000485063 MED24O75448 989 aa8.71□□□□□ -1.02
MACF1-220ENST00000485063 ZSCAN20P17040 1043 aaPredicted RBP8.71□□□□□ -1.02
MACF1-220ENST00000485063 EIF4BP23588 611 aaKnown RBP8.71□□□□□ -1.02
MACF1-220ENST00000485063 CD52P31358 61 aa8.71□□□□□ -1.02
MACF1-220ENST00000485063 GPC3P51654 580 aa8.71□□□□□ -1.02
MACF1-220ENST00000485063 SF3A1Q15459 793 aaKnown RBP8.71□□□□□ -1.02
MACF1-220ENST00000485063 ZNF410Q86VK4 478 aa8.71□□□□□ -1.02
MACF1-220ENST00000485063 HERC6Q8IVU3 1022 aa8.71□□□□□ -1.02
MACF1-220ENST00000485063 DEFB123Q8N688 67 aa8.71□□□□□ -1.02
MACF1-220ENST00000485063 IGSF22Q8N9C0 903 aa8.71□□□□□ -1.02
MACF1-220ENST00000485063 SPRYD3Q8NCJ5 442 aa8.71□□□□□ -1.02
MACF1-220ENST00000485063 PIGOQ8TEQ8 1089 aa8.71□□□□□ -1.02
MACF1-220ENST00000485063 PSPC1Q8WXF1 523 aaKnown RBP8.71□□□□□ -1.02
MACF1-220ENST00000485063 VWCEQ96DN2 955 aa8.71□□□□□ -1.02
MACF1-220ENST00000485063 CDK5RAP3Q96JB5 506 aa8.71□□□□□ -1.02
MACF1-220ENST00000485063 AK8Q96MA6 479 aa8.71□□□□□ -1.02
MACF1-220ENST00000485063 OSMRQ99650 979 aa8.71□□□□□ -1.02
MACF1-220ENST00000485063 PBX4Q9BYU1 374 aa8.71□□□□□ -1.02
MACF1-220ENST00000485063 NT5C3AQ9H0P0 336 aa8.71□□□□□ -1.02
MACF1-220ENST00000485063 DHX33Q9H6R0 707 aaKnown RBP8.71□□□□□ -1.02
MACF1-220ENST00000485063 ATP6V0A4Q9HBG4 840 aa8.71□□□□□ -1.02
MACF1-220ENST00000485063 SUCLA2Q9P2R7 463 aaPredicted RBP8.71□□□□□ -1.02
MACF1-220ENST00000485063 WRAP73Q9P2S5 460 aaPredicted RBP8.71□□□□□ -1.02
MACF1-220ENST00000485063 DBR1Q9UK59 544 aaKnown RBP8.71□□□□□ -1.02
MACF1-220ENST00000485063 PADI3Q9ULW8 664 aa8.71□□□□□ -1.02
MACF1-220ENST00000485063 PTPRSQ13332 1948 aa8.7□□□□□ -1.02
MACF1-220ENST00000485063 ARHGEF35A5YM69 484 aa8.7□□□□□ -1.02
MACF1-220ENST00000485063 UPP2O95045 317 aa8.7□□□□□ -1.02
MACF1-220ENST00000485063 STAG3L1P0CL83 205 aa8.7□□□□□ -1.02
MACF1-220ENST00000485063 SPATA31C1P0DKV0 1188 aa8.7□□□□□ -1.02
MACF1-220ENST00000485063 SFPQP23246 707 aaKnown RBP eCLIP8.7□□□□□ -1.02
MACF1-220ENST00000485063 RARRES1P49788 294 aa8.7□□□□□ -1.02
MACF1-220ENST00000485063 RABGGTBP53611 331 aa8.7□□□□□ -1.02
MACF1-220ENST00000485063 DEFB103AP81534 67 aa8.7□□□□□ -1.02
MACF1-220ENST00000485063 RESTQ13127 1097 aa8.7□□□□□ -1.02
MACF1-220ENST00000485063 TFDP1Q14186 410 aa8.7□□□□□ -1.02
MACF1-220ENST00000485063 MXD4Q14582 209 aaPredicted RBP8.7□□□□□ -1.02
MACF1-220ENST00000485063 EMC2Q15006 297 aa8.7□□□□□ -1.02
MACF1-220ENST00000485063 PPP2R2DQ66LE6 453 aa8.7□□□□□ -1.02
MACF1-220ENST00000485063 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.7□□□□□ -1.02
MACF1-220ENST00000485063 KCTD17Q8N5Z5 321 aa8.7□□□□□ -1.02
MACF1-220ENST00000485063 LINC01465Q8N7H1 131 aa8.7□□□□□ -1.02
MACF1-220ENST00000485063 MCPH1Q8NEM0 835 aa8.7□□□□□ -1.02
MACF1-220ENST00000485063 RASSF8Q8NHQ8 419 aa8.7□□□□□ -1.02
MACF1-220ENST00000485063 TOP1MTQ969P6 601 aa8.7□□□□□ -1.02
MACF1-220ENST00000485063 CALML4Q96GE6 196 aa8.7□□□□□ -1.02
MACF1-220ENST00000485063 NLRP4Q96MN2 994 aa8.7□□□□□ -1.02
MACF1-220ENST00000485063 ZNF396Q96N95 335 aaPredicted RBP8.7□□□□□ -1.02
MACF1-220ENST00000485063 CEP89Q96ST8 783 aa8.7□□□□□ -1.02
MACF1-220ENST00000485063 RAD9AQ99638 391 aa8.7□□□□□ -1.02
MACF1-220ENST00000485063 NKX2-4Q9H2Z4 354 aa8.7□□□□□ -1.02
MACF1-220ENST00000485063 ZNF576Q9H609 170 aa8.7□□□□□ -1.02
MACF1-220ENST00000485063 AGO3Q9H9G7 860 aaKnown RBP8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms