RNA–Protein interactions for RNA: ENST00000484822.1

RXRA-203, Transcript of retinoid X receptor alpha, humanhuman

TSL 2

Gene RXRA, Length 5,215 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-203ENST00000484822 ZC4H2Q9NQZ6 224 aa16.21■□□□□ 0.19
RXRA-203ENST00000484822 DCCP43146 1447 aa16.21■□□□□ 0.19
RXRA-203ENST00000484822 RIN2Q8WYP3 895 aaPredicted RBP16.21■□□□□ 0.18
RXRA-203ENST00000484822 CACYBPQ9HB71 228 aaKnown RBP16.21■□□□□ 0.18
RXRA-203ENST00000484822 CD163L1Q9NR16 1453 aa16.2■□□□□ 0.18
RXRA-203ENST00000484822 DIAPH2O60879 1101 aa16.2■□□□□ 0.18
RXRA-203ENST00000484822 DNAJC24Q6P3W2 148 aa16.2■□□□□ 0.18
RXRA-203ENST00000484822 MRPL47Q9HD33 250 aaKnown RBP16.2■□□□□ 0.18
RXRA-203ENST00000484822 ZNF277Q9NRM2 450 aaPredicted RBP16.2■□□□□ 0.18
RXRA-203ENST00000484822 NRBP2Q9NSY0 501 aa16.2■□□□□ 0.18
RXRA-203ENST00000484822 ADGRB1O14514 1584 aa16.2■□□□□ 0.18
RXRA-203ENST00000484822 LIFRP42702 1097 aa16.2■□□□□ 0.18
RXRA-203ENST00000484822 IFRD2Q12894 506 aaPredicted RBP16.2■□□□□ 0.18
RXRA-203ENST00000484822 E4F1Q66K89 784 aaPredicted RBP16.2■□□□□ 0.18
RXRA-203ENST00000484822 PRPF31Q8WWY3 499 aaKnown RBP16.2■□□□□ 0.18
RXRA-203ENST00000484822 STRBPQ96SI9 672 aaKnown RBP16.2■□□□□ 0.18
RXRA-203ENST00000484822 LBHD1Q9BQE6 289 aaPredicted RBP16.2■□□□□ 0.18
RXRA-203ENST00000484822 RFX7Q2KHR2 1363 aa16.2■□□□□ 0.18
RXRA-203ENST00000484822 KITP10721 976 aa16.2■□□□□ 0.18
RXRA-203ENST00000484822 PTPREP23469 700 aa16.2■□□□□ 0.18
RXRA-203ENST00000484822 HOXD10P28358 340 aa16.2■□□□□ 0.18
RXRA-203ENST00000484822 UBXN2AP68543 259 aa16.2■□□□□ 0.18
RXRA-203ENST00000484822 MUM1L1Q5H9M0 696 aa16.2■□□□□ 0.18
RXRA-203ENST00000484822 FOXP4Q8IVH2 680 aaPredicted RBP16.2■□□□□ 0.18
RXRA-203ENST00000484822 ATP6V1E2Q96A05 226 aa16.2■□□□□ 0.18
RXRA-203ENST00000484822 BPIFA3Q9BQP9 254 aa16.2■□□□□ 0.18
RXRA-203ENST00000484822 NEURL4Q96JN8 1562 aa16.2■□□□□ 0.18
RXRA-203ENST00000484822 COPEO14579 308 aa16.2■□□□□ 0.18
RXRA-203ENST00000484822 PODNQ7Z5L7 613 aa16.2■□□□□ 0.18
RXRA-203ENST00000484822 MYO3BQ8WXR4 1341 aa16.19■□□□□ 0.18
RXRA-203ENST00000484822 TTC26A0AVF1 554 aa16.19■□□□□ 0.18
RXRA-203ENST00000484822 ARHGEF37A1IGU5 675 aa16.19■□□□□ 0.18
RXRA-203ENST00000484822 OCA2Q04671 838 aa16.19■□□□□ 0.18
RXRA-203ENST00000484822 LRRC63Q05C16 580 aa16.19■□□□□ 0.18
RXRA-203ENST00000484822 EIF2AQ9BY44 585 aaKnown RBP16.19■□□□□ 0.18
RXRA-203ENST00000484822 CAPN11Q9UMQ6 739 aa16.19■□□□□ 0.18
RXRA-203ENST00000484822 IPO5O00410 1097 aaKnown RBP16.19■□□□□ 0.18
RXRA-203ENST00000484822 XPOTO43592 962 aaKnown RBP16.19■□□□□ 0.18
RXRA-203ENST00000484822 MXI1P50539 228 aa16.19■□□□□ 0.18
RXRA-203ENST00000484822 ZNF211Q13398 564 aaPredicted RBP16.19■□□□□ 0.18
RXRA-203ENST00000484822 PLCB4Q15147 1175 aa16.19■□□□□ 0.18
RXRA-203ENST00000484822 C4orf50Q6ZRC1 276 aa16.19■□□□□ 0.18
RXRA-203ENST00000484822 ABI1Q8IZP0 508 aa16.19■□□□□ 0.18
RXRA-203ENST00000484822 CELF1Q92879 486 aaKnown RBP16.19■□□□□ 0.18
RXRA-203ENST00000484822 TAF1DQ9H5J8 278 aaPredicted RBP16.19■□□□□ 0.18
RXRA-203ENST00000484822 NDE1Q9NXR1 346 aa16.19■□□□□ 0.18
RXRA-203ENST00000484822 FBXL5Q9UKA1 691 aa16.19■□□□□ 0.18
RXRA-203ENST00000484822 CCPG1Q9ULG6 757 aa16.19■□□□□ 0.18
RXRA-203ENST00000484822 GSTA4O15217 222 aa16.19■□□□□ 0.18
RXRA-203ENST00000484822 OCRLQ01968 901 aa16.19■□□□□ 0.18
RXRA-203ENST00000484822 SYNE4Q8N205 404 aa16.19■□□□□ 0.18
RXRA-203ENST00000484822 CEP19Q96LK0 163 aa16.19■□□□□ 0.18
RXRA-203ENST00000484822 HEMGNQ9BXL5 484 aa16.19■□□□□ 0.18
RXRA-203ENST00000484822 CFAP69A5D8W1 941 aa16.19■□□□□ 0.18
RXRA-203ENST00000484822 GAP43P17677 238 aa16.19■□□□□ 0.18
RXRA-203ENST00000484822 RAB44Q7Z6P3 723 aaPredicted RBP16.19■□□□□ 0.18
RXRA-203ENST00000484822 FAM149B1Q96BN6 582 aa16.19■□□□□ 0.18
RXRA-203ENST00000484822 PLA2G12BQ9BX93 195 aa16.19■□□□□ 0.18
RXRA-203ENST00000484822 APOBEC2Q9Y235 224 aaKnown RBP16.19■□□□□ 0.18
RXRA-203ENST00000484822 CLEC17AQ6ZS10 378 aa16.18■□□□□ 0.18
RXRA-203ENST00000484822 SLC10A4Q96EP9 437 aa16.18■□□□□ 0.18
RXRA-203ENST00000484822 KRT37O76014 449 aa16.18■□□□□ 0.18
RXRA-203ENST00000484822 HSPA4LO95757 839 aa16.18■□□□□ 0.18
RXRA-203ENST00000484822 USP17L8P0C7I0 530 aa16.18■□□□□ 0.18
RXRA-203ENST00000484822 RHOT2Q8IXI1 618 aa16.18■□□□□ 0.18
RXRA-203ENST00000484822 KCTD6Q8NC69 237 aa16.18■□□□□ 0.18
RXRA-203ENST00000484822 DEPDC1BQ8WUY9 529 aa16.18■□□□□ 0.18
RXRA-203ENST00000484822 LRFN2Q9ULH4 789 aa16.18■□□□□ 0.18
RXRA-203ENST00000484822 INPP5FQ9Y2H2 1132 aa16.18■□□□□ 0.18
RXRA-203ENST00000484822 C21orf2O43822 256 aa16.18■□□□□ 0.18
RXRA-203ENST00000484822 VWDEQ8N2E2 1590 aa16.18■□□□□ 0.18
RXRA-203ENST00000484822 SKA2Q8WVK7 121 aaPredicted RBP16.18■□□□□ 0.18
RXRA-203ENST00000484822 CCDC124Q96CT7 223 aaKnown RBP16.18■□□□□ 0.18
RXRA-203ENST00000484822 CCT8L2Q96SF2 557 aa16.18■□□□□ 0.18
RXRA-203ENST00000484822 IQGAP1P46940 1657 aa16.18■□□□□ 0.18
RXRA-203ENST00000484822 GRIN3BO60391 1043 aa16.18■□□□□ 0.18
RXRA-203ENST00000484822 PRR29P0C7W0 189 aa16.18■□□□□ 0.18
RXRA-203ENST00000484822 SPATA4Q8NEY3 305 aa16.18■□□□□ 0.18
RXRA-203ENST00000484822 PIGSQ96S52 555 aa16.18■□□□□ 0.18
RXRA-203ENST00000484822 LRRC1Q9BTT6 524 aa16.18■□□□□ 0.18
RXRA-203ENST00000484822 CD209Q9NNX6 404 aa16.18■□□□□ 0.18
RXRA-203ENST00000484822 CPDO75976 1380 aa16.17■□□□□ 0.18
RXRA-203ENST00000484822 MAN1A2O60476 641 aa16.17■□□□□ 0.18
RXRA-203ENST00000484822 POLGP54098 1239 aaPredicted RBP16.17■□□□□ 0.18
RXRA-203ENST00000484822 AP2B1P63010 937 aa16.17■□□□□ 0.18
RXRA-203ENST00000484822 TFDP1Q14186 410 aa16.17■□□□□ 0.18
RXRA-203ENST00000484822 RABL6Q3YEC7 729 aaPredicted RBP16.17■□□□□ 0.18
RXRA-203ENST00000484822 SLC30A9Q6PML9 568 aa16.17■□□□□ 0.18
RXRA-203ENST00000484822 RNF207Q6ZRF8 634 aa16.17■□□□□ 0.18
RXRA-203ENST00000484822 ZNF473Q8WTR7 871 aaKnown RBP16.17■□□□□ 0.18
RXRA-203ENST00000484822 DPF2Q92785 391 aa16.17■□□□□ 0.18
RXRA-203ENST00000484822 IQCA1LA6NCM1 817 aa16.17■□□□□ 0.18
RXRA-203ENST00000484822 PLA2G4BP0C869 781 aa16.17■□□□□ 0.18
RXRA-203ENST00000484822 CCZ1BP86790 482 aa16.17■□□□□ 0.18
RXRA-203ENST00000484822 CCZ1P86791 482 aaPredicted RBP16.17■□□□□ 0.18
RXRA-203ENST00000484822 FOXO4P98177 505 aa16.17■□□□□ 0.18
RXRA-203ENST00000484822 NFIXQ14938 502 aa16.17■□□□□ 0.18
RXRA-203ENST00000484822 COA7Q96BR5 231 aa16.17■□□□□ 0.18
RXRA-203ENST00000484822 POLR3CQ9BUI4 534 aaPredicted RBP16.17■□□□□ 0.18
RXRA-203ENST00000484822 SPATA31A5Q5VU36 1347 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms