RNA–Protein interactions for RNA: ENST00000484763.1

VCPKMT-203, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-203ENST00000484763 SCFD1Q8WVM8 642 aa22.59■■□□□ 1.21
VCPKMT-203ENST00000484763 P2RX5Q93086 422 aa22.59■■□□□ 1.21
VCPKMT-203ENST00000484763 KATNAL1Q9BW62 490 aa22.59■■□□□ 1.21
VCPKMT-203ENST00000484763 PTPN22Q9Y2R2 807 aa22.59■■□□□ 1.21
VCPKMT-203ENST00000484763 CENPFP49454 3210 aa22.58■■□□□ 1.21
VCPKMT-203ENST00000484763 IGKV6-21A0A0C4DH24 114 aa22.58■■□□□ 1.21
VCPKMT-203ENST00000484763 BICDL2A1A5D9 508 aa22.58■■□□□ 1.21
VCPKMT-203ENST00000484763 EIF3DO15371 548 aaKnown RBP eCLIP22.58■■□□□ 1.21
VCPKMT-203ENST00000484763 ZEB2O60315 1214 aa22.58■■□□□ 1.21
VCPKMT-203ENST00000484763 ADAMTS4O75173 837 aa22.58■■□□□ 1.21
VCPKMT-203ENST00000484763 PGK1P00558 417 aa22.58■■□□□ 1.21
VCPKMT-203ENST00000484763 MYBP10242 640 aa22.58■■□□□ 1.21
VCPKMT-203ENST00000484763 NMT1P30419 496 aaKnown RBP22.58■■□□□ 1.21
VCPKMT-203ENST00000484763 PPFIA1Q13136 1202 aa22.58■■□□□ 1.21
VCPKMT-203ENST00000484763 MFSD10Q14728 455 aa22.58■■□□□ 1.21
VCPKMT-203ENST00000484763 GNASQ5JWF2 1037 aa22.58■■□□□ 1.21
VCPKMT-203ENST00000484763 TRAPPC12Q8WVT3 735 aa22.58■■□□□ 1.21
VCPKMT-203ENST00000484763 KAT6AQ92794 2004 aa22.58■■□□□ 1.21
VCPKMT-203ENST00000484763 UBE4BO95155 1302 aa22.57■■□□□ 1.2
VCPKMT-203ENST00000484763 FRMPD3Q5JV73 1810 aa22.57■■□□□ 1.2
VCPKMT-203ENST00000484763 K7ENM7 598 aa22.57■■□□□ 1.2
VCPKMT-203ENST00000484763 MSCO60682 206 aa22.57■■□□□ 1.2
VCPKMT-203ENST00000484763 PEX3P56589 373 aa22.57■■□□□ 1.2
VCPKMT-203ENST00000484763 PURAQ00577 322 aaKnown RBP22.57■■□□□ 1.2
VCPKMT-203ENST00000484763 BMT2Q1RMZ1 405 aa22.57■■□□□ 1.2
VCPKMT-203ENST00000484763 KIAA0753Q2KHM9 967 aa22.57■■□□□ 1.2
VCPKMT-203ENST00000484763 SPATA1Q5VX52 437 aa22.57■■□□□ 1.2
VCPKMT-203ENST00000484763 ZNF720Q7Z2F6 126 aa22.57■■□□□ 1.2
VCPKMT-203ENST00000484763 TCP11Q8WWU5 503 aa22.57■■□□□ 1.2
VCPKMT-203ENST00000484763 TMEM143Q96AN5 459 aa22.57■■□□□ 1.2
VCPKMT-203ENST00000484763 IFT74Q96LB3 600 aa22.57■■□□□ 1.2
VCPKMT-203ENST00000484763 HMX1Q9NP08 348 aaPredicted RBP22.57■■□□□ 1.2
VCPKMT-203ENST00000484763 NFE2L3Q9Y4A8 694 aa22.57■■□□□ 1.2
VCPKMT-203ENST00000484763 C22orf31O95567 290 aa22.57■■□□□ 1.2
VCPKMT-203ENST00000484763 PSEN2P49810 448 aa22.57■■□□□ 1.2
VCPKMT-203ENST00000484763 SMTNP53814 917 aa22.57■■□□□ 1.2
VCPKMT-203ENST00000484763 IGBP1P78318 339 aa22.57■■□□□ 1.2
VCPKMT-203ENST00000484763 ALCAMQ13740 583 aa22.57■■□□□ 1.2
VCPKMT-203ENST00000484763 CENPPQ6IPU0 288 aa22.57■■□□□ 1.2
VCPKMT-203ENST00000484763 SPIRE2Q8WWL2 714 aa22.57■■□□□ 1.2
VCPKMT-203ENST00000484763 KCNG1Q9UIX4 513 aa22.57■■□□□ 1.2
VCPKMT-203ENST00000484763 PCDHB13Q9Y5F0 798 aa22.57■■□□□ 1.2
VCPKMT-203ENST00000484763 TRIM49BA6NDI0 452 aa22.56■■□□□ 1.2
VCPKMT-203ENST00000484763 HAS3O00219 553 aa22.56■■□□□ 1.2
VCPKMT-203ENST00000484763 CST5P28325 142 aaPredicted RBP22.56■■□□□ 1.2
VCPKMT-203ENST00000484763 ARL2P36404 184 aa22.56■■□□□ 1.2
VCPKMT-203ENST00000484763 NPTX2P47972 431 aa22.56■■□□□ 1.2
VCPKMT-203ENST00000484763 PMS1P54277 932 aaKnown RBP22.56■■□□□ 1.2
VCPKMT-203ENST00000484763 NCKAP1LP55160 1127 aa22.56■■□□□ 1.2
VCPKMT-203ENST00000484763 GRIK4Q16099 956 aa22.56■■□□□ 1.2
VCPKMT-203ENST00000484763 TPD52L1Q16890 204 aaPredicted RBP22.56■■□□□ 1.2
VCPKMT-203ENST00000484763 RETREG2Q8NC44 543 aa22.56■■□□□ 1.2
VCPKMT-203ENST00000484763 ZNF507Q8TCN5 953 aa22.56■■□□□ 1.2
VCPKMT-203ENST00000484763 BSNDQ8WZ55 320 aa22.56■■□□□ 1.2
VCPKMT-203ENST00000484763 ST6GALNAC4Q9H4F1 302 aa22.56■■□□□ 1.2
VCPKMT-203ENST00000484763 CCDC169A6NNP5 214 aa22.55■■□□□ 1.2
VCPKMT-203ENST00000484763 MAGEB2O15479 319 aa22.55■■□□□ 1.2
VCPKMT-203ENST00000484763 PRPF6O94906 941 aaKnown RBP22.55■■□□□ 1.2
VCPKMT-203ENST00000484763 LRRC63Q05C16 580 aa22.55■■□□□ 1.2
VCPKMT-203ENST00000484763 PPP2R5AQ15172 486 aa22.55■■□□□ 1.2
VCPKMT-203ENST00000484763 IER5Q5VY09 327 aa22.55■■□□□ 1.2
VCPKMT-203ENST00000484763 TTI2Q6NXR4 508 aa22.55■■□□□ 1.2
VCPKMT-203ENST00000484763 NELFCDQ8IXH7 590 aa22.55■■□□□ 1.2
VCPKMT-203ENST00000484763 MTG1Q9BT17 334 aaPredicted RBP22.55■■□□□ 1.2
VCPKMT-203ENST00000484763 SEMA6BQ9H3T3 888 aa22.55■■□□□ 1.2
VCPKMT-203ENST00000484763 SUGCTQ9HAC7 445 aa22.55■■□□□ 1.2
VCPKMT-203ENST00000484763 KMT5AQ9NQR1 393 aa22.55■■□□□ 1.2
VCPKMT-203ENST00000484763 RRN3P2A6NIE6 340 aa22.54■■□□□ 1.2
VCPKMT-203ENST00000484763 PPP1R37O75864 691 aa22.54■■□□□ 1.2
VCPKMT-203ENST00000484763 SMIM10L2AP0DMW4 78 aa22.54■■□□□ 1.2
VCPKMT-203ENST00000484763 SMIM10L2BP0DMW5 78 aa22.54■■□□□ 1.2
VCPKMT-203ENST00000484763 CHMP4BP1P59074 171 aa22.54■■□□□ 1.2
VCPKMT-203ENST00000484763 FOXR2Q6PJQ5 311 aa22.54■■□□□ 1.2
VCPKMT-203ENST00000484763 LRRC71Q8N4P6 559 aa22.54■■□□□ 1.2
VCPKMT-203ENST00000484763 KLHDC9Q8NEP7 349 aa22.54■■□□□ 1.2
VCPKMT-203ENST00000484763 ASAP3Q8TDY4 903 aa22.54■■□□□ 1.2
VCPKMT-203ENST00000484763 SH3TC2Q8TF17 1288 aa22.54■■□□□ 1.2
VCPKMT-203ENST00000484763 TSG101Q99816 390 aa22.54■■□□□ 1.2
VCPKMT-203ENST00000484763 NTPCRQ9BSD7 190 aaKnown RBP22.54■■□□□ 1.2
VCPKMT-203ENST00000484763 STRA6Q9BX79 667 aa22.54■■□□□ 1.2
VCPKMT-203ENST00000484763 FANCLQ9NW38 375 aa22.54■■□□□ 1.2
VCPKMT-203ENST00000484763 SCN10AQ9Y5Y9 1956 aa22.54■■□□□ 1.2
VCPKMT-203ENST00000484763 NRCAMQ92823 1304 aa22.54■■□□□ 1.2
VCPKMT-203ENST00000484763 SLC16A4O15374 487 aa22.54■■□□□ 1.2
VCPKMT-203ENST00000484763 GLRA2P23416 452 aa22.54■■□□□ 1.2
VCPKMT-203ENST00000484763 KNOP1Q1ED39 458 aaKnown RBP22.54■■□□□ 1.2
VCPKMT-203ENST00000484763 ZC2HC1CQ53FD0 456 aaPredicted RBP22.54■■□□□ 1.2
VCPKMT-203ENST00000484763 ANKRD40Q6AI12 368 aa22.54■■□□□ 1.2
VCPKMT-203ENST00000484763 EFCAB12Q6NXP0 572 aa22.54■■□□□ 1.2
VCPKMT-203ENST00000484763 HAUS6Q7Z4H7 955 aa22.54■■□□□ 1.2
VCPKMT-203ENST00000484763 PSPC1Q8WXF1 523 aaKnown RBP22.54■■□□□ 1.2
VCPKMT-203ENST00000484763 HSD3B7Q9H2F3 369 aa22.54■■□□□ 1.2
VCPKMT-203ENST00000484763 KCTD10Q9H3F6 313 aa22.54■■□□□ 1.2
VCPKMT-203ENST00000484763 EVPLQ92817 2033 aa22.54■■□□□ 1.2
VCPKMT-203ENST00000484763 H0YCG3 227 aa22.53■■□□□ 1.2
VCPKMT-203ENST00000484763 HSPA8P11142 646 aaKnown RBP22.53■■□□□ 1.2
VCPKMT-203ENST00000484763 KLRC1P26715 233 aa22.53■■□□□ 1.2
VCPKMT-203ENST00000484763 NAMPTP43490 491 aa22.53■■□□□ 1.2
VCPKMT-203ENST00000484763 DNM2P50570 870 aa22.53■■□□□ 1.2
VCPKMT-203ENST00000484763 DRP2Q13474 957 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms