RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 RRP1BQ14684 758 aaKnown RBP6.7□□□□□ -1.34
SCAF11-207ENST00000484275 ZCCHC8Q6NZY4 707 aaKnown RBP6.7□□□□□ -1.34
SCAF11-207ENST00000484275 TMPRSS6Q8IU80 811 aa6.7□□□□□ -1.34
SCAF11-207ENST00000484275 NEU4Q8WWR8 484 aaPredicted RBP6.7□□□□□ -1.34
SCAF11-207ENST00000484275 NKD2Q969F2 451 aaPredicted RBP6.7□□□□□ -1.34
SCAF11-207ENST00000484275 RPL10LQ96L21 214 aaKnown RBP6.7□□□□□ -1.34
SCAF11-207ENST00000484275 SLC6A15Q9H2J7 730 aa6.7□□□□□ -1.34
SCAF11-207ENST00000484275 SAE1Q9UBE0 346 aaPredicted RBP6.7□□□□□ -1.34
SCAF11-207ENST00000484275 DENND2AQ9ULE3 1009 aa6.7□□□□□ -1.34
SCAF11-207ENST00000484275 DNAJC8O75937 253 aaPredicted RBP6.69□□□□□ -1.34
SCAF11-207ENST00000484275 DPTQ07507 201 aa6.69□□□□□ -1.34
SCAF11-207ENST00000484275 ZNF460Q14592 562 aa6.69□□□□□ -1.34
SCAF11-207ENST00000484275 ARHGAP44Q17R89 818 aa6.69□□□□□ -1.34
SCAF11-207ENST00000484275 Q6ZRM9 215 aa6.69□□□□□ -1.34
SCAF11-207ENST00000484275 CHST14Q8NCH0 376 aa6.69□□□□□ -1.34
SCAF11-207ENST00000484275 LARP4BQ92615 738 aaKnown RBP6.69□□□□□ -1.34
SCAF11-207ENST00000484275 SLC7A6OSQ96CW6 309 aaPredicted RBP6.69□□□□□ -1.34
SCAF11-207ENST00000484275 MAML3Q96JK9 1138 aa6.69□□□□□ -1.34
SCAF11-207ENST00000484275 RBM8AQ9Y5S9 174 aaKnown RBP6.69□□□□□ -1.34
SCAF11-207ENST00000484275 SCNN1GP51170 649 aa6.68□□□□□ -1.34
SCAF11-207ENST00000484275 SLC25A3Q00325 362 aa6.68□□□□□ -1.34
SCAF11-207ENST00000484275 ROM1Q03395 351 aa6.68□□□□□ -1.34
SCAF11-207ENST00000484275 SLFN12LQ6IEE8 588 aa6.68□□□□□ -1.34
SCAF11-207ENST00000484275 GAREM2Q75VX8 874 aa6.68□□□□□ -1.34
SCAF11-207ENST00000484275 ZNF627Q7L945 461 aa6.68□□□□□ -1.34
SCAF11-207ENST00000484275 DDX53Q86TM3 631 aaKnown RBP6.68□□□□□ -1.34
SCAF11-207ENST00000484275 THEMISQ8N1K5 641 aaPredicted RBP6.68□□□□□ -1.34
SCAF11-207ENST00000484275 ANKRD53Q8N9V6 530 aa6.68□□□□□ -1.34
SCAF11-207ENST00000484275 ZNF483Q8TF39 744 aaPredicted RBP6.68□□□□□ -1.34
SCAF11-207ENST00000484275 LPPQ93052 612 aa6.68□□□□□ -1.34
SCAF11-207ENST00000484275 C16orf92Q96LL3 132 aa6.68□□□□□ -1.34
SCAF11-207ENST00000484275 MPHOSPH9Q99550 1183 aa6.68□□□□□ -1.34
SCAF11-207ENST00000484275 AURKAIP1Q9NWT8 199 aaPredicted RBP6.68□□□□□ -1.34
SCAF11-207ENST00000484275 TNPO3Q9Y5L0 923 aaKnown RBP6.68□□□□□ -1.34
SCAF11-207ENST00000484275 PTPDC1A2A3K4 754 aa6.67□□□□□ -1.34
SCAF11-207ENST00000484275 H2AFYO75367 372 aaKnown RBP6.67□□□□□ -1.34
SCAF11-207ENST00000484275 PTX3P26022 381 aaPredicted RBP6.67□□□□□ -1.34
SCAF11-207ENST00000484275 IGFALSP35858 605 aa6.67□□□□□ -1.34
SCAF11-207ENST00000484275 SESN2P58004 480 aaPredicted RBP6.67□□□□□ -1.34
SCAF11-207ENST00000484275 BPIFB4P59827 614 aa6.67□□□□□ -1.34
SCAF11-207ENST00000484275 TCIRG1Q13488 830 aa6.67□□□□□ -1.34
SCAF11-207ENST00000484275 SQSTM1Q13501 440 aa6.67□□□□□ -1.34
SCAF11-207ENST00000484275 DGKDQ16760 1214 aa6.67□□□□□ -1.34
SCAF11-207ENST00000484275 LDLRAD3Q86YD5 345 aa6.67□□□□□ -1.34
SCAF11-207ENST00000484275 GFM2Q969S9 779 aaKnown RBP6.67□□□□□ -1.34
SCAF11-207ENST00000484275 CEP89Q96ST8 783 aa6.67□□□□□ -1.34
SCAF11-207ENST00000484275 KANSL2Q9H9L4 492 aa6.67□□□□□ -1.34
SCAF11-207ENST00000484275 SLC2A4RGQ9NR83 387 aa6.67□□□□□ -1.34
SCAF11-207ENST00000484275 UBA6A0AVT1 1052 aaPredicted RBP6.66□□□□□ -1.34
SCAF11-207ENST00000484275 CRHR2Q13324 411 aa6.66□□□□□ -1.34
SCAF11-207ENST00000484275 MYBPC3Q14896 1274 aa6.66□□□□□ -1.34
SCAF11-207ENST00000484275 SOGA3Q5TF21 947 aa6.66□□□□□ -1.34
SCAF11-207ENST00000484275 CREB3L3Q68CJ9 461 aa6.66□□□□□ -1.34
SCAF11-207ENST00000484275 CLEC14AQ86T13 490 aa6.66□□□□□ -1.34
SCAF11-207ENST00000484275 KIAA1958Q8N8K9 716 aa6.66□□□□□ -1.34
SCAF11-207ENST00000484275 GCDHQ92947 438 aaPredicted RBP6.66□□□□□ -1.34
SCAF11-207ENST00000484275 E2F7Q96AV8 911 aa6.66□□□□□ -1.34
SCAF11-207ENST00000484275 DNAJC2Q99543 621 aaKnown RBP6.66□□□□□ -1.34
SCAF11-207ENST00000484275 HAPLN2Q9GZV7 340 aa6.66□□□□□ -1.34
SCAF11-207ENST00000484275 ACSS2Q9NR19 701 aa6.66□□□□□ -1.34
SCAF11-207ENST00000484275 C11orf21Q9P2W6 132 aa6.66□□□□□ -1.34
SCAF11-207ENST00000484275 WDR33Q9C0J8 1336 aaKnown RBP6.66□□□□□ -1.34
SCAF11-207ENST00000484275 UBE2QL1A1L167 161 aa6.65□□□□□ -1.34
SCAF11-207ENST00000484275 CYP27B1O15528 508 aa6.65□□□□□ -1.34
SCAF11-207ENST00000484275 SDSP20132 328 aa6.65□□□□□ -1.34
SCAF11-207ENST00000484275 FNDC3BQ53EP0 1204 aaKnown RBP6.65□□□□□ -1.34
SCAF11-207ENST00000484275 TTC38Q5R3I4 469 aa6.65□□□□□ -1.34
SCAF11-207ENST00000484275 PRAMEF9Q5VWM5 478 aa6.65□□□□□ -1.34
SCAF11-207ENST00000484275 ESRP1Q6NXG1 681 aaKnown RBP6.65□□□□□ -1.34
SCAF11-207ENST00000484275 Q6ZPA2 131 aa6.65□□□□□ -1.34
SCAF11-207ENST00000484275 ANKRD35Q8N283 1001 aa6.65□□□□□ -1.34
SCAF11-207ENST00000484275 CLIP3Q96DZ5 547 aa6.65□□□□□ -1.34
SCAF11-207ENST00000484275 OSBPL2Q9H1P3 480 aa6.65□□□□□ -1.34
SCAF11-207ENST00000484275 KCMF1Q9P0J7 381 aa6.65□□□□□ -1.34
SCAF11-207ENST00000484275 DNAI1Q9UI46 699 aa6.65□□□□□ -1.34
SCAF11-207ENST00000484275 CDK11AQ9UQ88 783 aaPredicted RBP6.65□□□□□ -1.34
SCAF11-207ENST00000484275 B4E1Z4 1266 aa6.64□□□□□ -1.35
SCAF11-207ENST00000484275 OPA1O60313 960 aa6.64□□□□□ -1.35
SCAF11-207ENST00000484275 ASLP04424 464 aa6.64□□□□□ -1.35
SCAF11-207ENST00000484275 HNRNPLP14866 589 aaKnown RBP eCLIP6.64□□□□□ -1.359e-6■□□□□ 8.2
SCAF11-207ENST00000484275 KRT4P19013 534 aa6.64□□□□□ -1.35
SCAF11-207ENST00000484275 SLC9A1P19634 815 aa6.64□□□□□ -1.35
SCAF11-207ENST00000484275 INHBCP55103 352 aa6.64□□□□□ -1.35
SCAF11-207ENST00000484275 FAM111BQ6SJ93 734 aa6.64□□□□□ -1.35
SCAF11-207ENST00000484275 PCSK4Q6UW60 755 aa6.64□□□□□ -1.35
SCAF11-207ENST00000484275 PLA2G15Q8NCC3 412 aa6.64□□□□□ -1.35
SCAF11-207ENST00000484275 MIEF2Q96C03 454 aa6.64□□□□□ -1.35
SCAF11-207ENST00000484275 DYDC2Q96IM9 177 aa6.64□□□□□ -1.35
SCAF11-207ENST00000484275 PCIF1Q9H4Z3 704 aa6.64□□□□□ -1.35
SCAF11-207ENST00000484275 IL23AQ9NPF7 189 aa6.64□□□□□ -1.35
SCAF11-207ENST00000484275 PARPBPQ9NWS1 579 aa6.64□□□□□ -1.35
SCAF11-207ENST00000484275 PODXL2Q9NZ53 605 aa6.64□□□□□ -1.35
SCAF11-207ENST00000484275 CBX4O00257 560 aa6.63□□□□□ -1.35
SCAF11-207ENST00000484275 PPP1R12AO14974 1030 aaPredicted RBP6.63□□□□□ -1.35
SCAF11-207ENST00000484275 TOX4O94842 621 aa6.63□□□□□ -1.35
SCAF11-207ENST00000484275 CYP17A1P05093 508 aa6.63□□□□□ -1.35
SCAF11-207ENST00000484275 ADH4P08319 380 aa6.63□□□□□ -1.35
SCAF11-207ENST00000484275 MAKP20794 623 aa6.63□□□□□ -1.35
SCAF11-207ENST00000484275 TOB2Q14106 344 aaPredicted RBP6.63□□□□□ -1.35
SCAF11-207ENST00000484275 EPHA7Q15375 998 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms