RNA–Protein interactions for RNA: ENST00000484252.5

LIMS2-215, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,099 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-215ENST00000484252 GALCP54803 685 aa21.41■■□□□ 1.02
LIMS2-215ENST00000484252 KCTD16Q68DU8 428 aa21.41■■□□□ 1.02
LIMS2-215ENST00000484252 ZNF720Q7Z2F6 126 aa21.41■■□□□ 1.02
LIMS2-215ENST00000484252 KRT27Q7Z3Y8 459 aa21.41■■□□□ 1.02
LIMS2-215ENST00000484252 MAATS1Q7Z4T9 603 aa21.41■■□□□ 1.02
LIMS2-215ENST00000484252 SH2D3CQ8N5H7 860 aa21.41■■□□□ 1.02
LIMS2-215ENST00000484252 LNX1Q8TBB1 728 aaPredicted RBP21.41■■□□□ 1.02
LIMS2-215ENST00000484252 WDR11Q9BZH6 1224 aa21.41■■□□□ 1.02
LIMS2-215ENST00000484252 GOLPH3Q9H4A6 298 aa21.41■■□□□ 1.02
LIMS2-215ENST00000484252 ARHGEF10LQ9HCE6 1279 aa21.41■■□□□ 1.02
LIMS2-215ENST00000484252 PLAAQ9Y263 795 aa21.41■■□□□ 1.02
LIMS2-215ENST00000484252 A0A1W2PRG0 241 aa21.41■■□□□ 1.02
LIMS2-215ENST00000484252 NR1D1P20393 614 aa21.41■■□□□ 1.02
LIMS2-215ENST00000484252 RFX1P22670 979 aa21.41■■□□□ 1.02
LIMS2-215ENST00000484252 JAG1P78504 1218 aa21.41■■□□□ 1.02
LIMS2-215ENST00000484252 TRADDQ15628 312 aa21.41■■□□□ 1.02
LIMS2-215ENST00000484252 RFFLQ8WZ73 363 aa21.41■■□□□ 1.02
LIMS2-215ENST00000484252 BCAS3Q9H6U6 928 aa21.41■■□□□ 1.02
LIMS2-215ENST00000484252 DNAJC12Q9UKB3 198 aa21.41■■□□□ 1.02
LIMS2-215ENST00000484252 SRRM3A6NNA2 597 aaPredicted RBP21.4■■□□□ 1.02
LIMS2-215ENST00000484252 GAS7O60861 476 aa21.4■■□□□ 1.02
LIMS2-215ENST00000484252 TAL1P17542 331 aaPredicted RBP21.4■■□□□ 1.02
LIMS2-215ENST00000484252 PDCLQ13371 301 aa21.4■■□□□ 1.02
LIMS2-215ENST00000484252 MTMR3Q13615 1198 aa21.4■■□□□ 1.02
LIMS2-215ENST00000484252 MYBPC2Q14324 1141 aa21.4■■□□□ 1.02
LIMS2-215ENST00000484252 B4GALNT4Q76KP1 1039 aa21.4■■□□□ 1.02
LIMS2-215ENST00000484252 SPATS2Q86XZ4 545 aaKnown RBP21.4■■□□□ 1.02
LIMS2-215ENST00000484252 FAM178BQ8IXR5 827 aa21.4■■□□□ 1.02
LIMS2-215ENST00000484252 ZNF622Q969S3 477 aaKnown RBP eCLIP21.4■■□□□ 1.02
LIMS2-215ENST00000484252 AP1M1Q9BXS5 423 aa21.4■■□□□ 1.02
LIMS2-215ENST00000484252 HERC5Q9UII4 1024 aaKnown RBP21.4■■□□□ 1.02
LIMS2-215ENST00000484252 ZNF646O15015 1829 aaPredicted RBP21.4■■□□□ 1.02
LIMS2-215ENST00000484252 DRAP1Q14919 205 aaPredicted RBP21.4■■□□□ 1.02
LIMS2-215ENST00000484252 ZC2HC1CQ53FD0 456 aaPredicted RBP21.4■■□□□ 1.02
LIMS2-215ENST00000484252 CC2D2BQ6DHV5 1058 aa21.4■■□□□ 1.02
LIMS2-215ENST00000484252 SLC9A9Q8IVB4 645 aa21.4■■□□□ 1.02
LIMS2-215ENST00000484252 ARFGAP2Q8N6H7 521 aa21.4■■□□□ 1.02
LIMS2-215ENST00000484252 OLIG1Q8TAK6 271 aa21.4■■□□□ 1.02
LIMS2-215ENST00000484252 RNPC3Q96LT9 517 aaKnown RBP21.4■■□□□ 1.02
LIMS2-215ENST00000484252 FIZ1Q96SL8 496 aa21.4■■□□□ 1.02
LIMS2-215ENST00000484252 SYT11Q9BT88 431 aa21.4■■□□□ 1.02
LIMS2-215ENST00000484252 TDRD3Q9H7E2 651 aaKnown RBP21.4■■□□□ 1.02
LIMS2-215ENST00000484252 TMBIM4Q9HC24 238 aa21.4■■□□□ 1.02
LIMS2-215ENST00000484252 POLD4Q9HCU8 107 aa21.4■■□□□ 1.02
LIMS2-215ENST00000484252 AGPAT3Q9NRZ7 376 aa21.4■■□□□ 1.02
LIMS2-215ENST00000484252 ATXN2Q99700 1313 aaKnown RBP21.39■■□□□ 1.02
LIMS2-215ENST00000484252 CPP00450 1065 aa21.39■■□□□ 1.01
LIMS2-215ENST00000484252 CFBP00751 764 aa21.39■■□□□ 1.01
LIMS2-215ENST00000484252 GUCY2CP25092 1073 aa21.39■■□□□ 1.01
LIMS2-215ENST00000484252 HSD17B3P37058 310 aa21.39■■□□□ 1.01
LIMS2-215ENST00000484252 CLUL1Q15846 466 aa21.39■■□□□ 1.01
LIMS2-215ENST00000484252 PPP2R5EQ16537 467 aa21.39■■□□□ 1.01
LIMS2-215ENST00000484252 COL23A1Q86Y22 540 aaPredicted RBP21.39■■□□□ 1.01
LIMS2-215ENST00000484252 DNAAF5Q86Y56 855 aa21.39■■□□□ 1.01
LIMS2-215ENST00000484252 CTNNBL1Q8WYA6 563 aaPredicted RBP21.39■■□□□ 1.01
LIMS2-215ENST00000484252 INTS2Q9H0H0 1204 aaKnown RBP21.39■■□□□ 1.01
LIMS2-215ENST00000484252 GOPCQ9HD26 462 aa21.39■■□□□ 1.01
LIMS2-215ENST00000484252 NDUFAB1O14561 156 aa21.38■■□□□ 1.01
LIMS2-215ENST00000484252 CHMP2AO43633 222 aa21.38■■□□□ 1.01
LIMS2-215ENST00000484252 POLD1P28340 1107 aa21.38■■□□□ 1.01
LIMS2-215ENST00000484252 ATP1A2P50993 1020 aa21.38■■□□□ 1.01
LIMS2-215ENST00000484252 SETQ01105 290 aaPredicted RBP21.38■■□□□ 1.01
LIMS2-215ENST00000484252 CEP85LQ5SZL2 805 aa21.38■■□□□ 1.01
LIMS2-215ENST00000484252 SEC14L1Q92503 715 aa21.38■■□□□ 1.01
LIMS2-215ENST00000484252 VTI1AQ96AJ9 217 aa21.38■■□□□ 1.01
LIMS2-215ENST00000484252 CSRNP1Q96S65 589 aa21.38■■□□□ 1.01
LIMS2-215ENST00000484252 DDX47Q9H0S4 455 aaKnown RBP21.38■■□□□ 1.01
LIMS2-215ENST00000484252 APEX2Q9UBZ4 518 aa21.38■■□□□ 1.01
LIMS2-215ENST00000484252 MRPL11Q9Y3B7 192 aaKnown RBP21.38■■□□□ 1.01
LIMS2-215ENST00000484252 FAM169AQ9Y6X4 670 aa21.38■■□□□ 1.01
LIMS2-215ENST00000484252 MMP10P09238 476 aa21.38■■□□□ 1.01
LIMS2-215ENST00000484252 VIL1P09327 827 aaKnown RBP21.38■■□□□ 1.01
LIMS2-215ENST00000484252 CEP55Q53EZ4 464 aa21.38■■□□□ 1.01
LIMS2-215ENST00000484252 TTC19Q6DKK2 380 aaPredicted RBP21.38■■□□□ 1.01
LIMS2-215ENST00000484252 STYK1Q6J9G0 422 aa21.38■■□□□ 1.01
LIMS2-215ENST00000484252 TADA2BQ86TJ2 420 aa21.38■■□□□ 1.01
LIMS2-215ENST00000484252 GLYCTKQ8IVS8 523 aa21.38■■□□□ 1.01
LIMS2-215ENST00000484252 SPICE1Q8N0Z3 855 aa21.38■■□□□ 1.01
LIMS2-215ENST00000484252 NEK9Q8TD19 979 aa21.38■■□□□ 1.01
LIMS2-215ENST00000484252 NAP1L3Q99457 506 aaPredicted RBP21.38■■□□□ 1.01
LIMS2-215ENST00000484252 EPN3Q9H201 632 aa21.38■■□□□ 1.01
LIMS2-215ENST00000484252 FAM114A2Q9NRY5 505 aa21.38■■□□□ 1.01
LIMS2-215ENST00000484252 TMX2Q9Y320 296 aa21.38■■□□□ 1.01
LIMS2-215ENST00000484252 MYZAPP0CAP1 466 aa21.37■■□□□ 1.01
LIMS2-215ENST00000484252 LSP1P33241 339 aa21.37■■□□□ 1.01
LIMS2-215ENST00000484252 MYL7Q01449 175 aa21.37■■□□□ 1.01
LIMS2-215ENST00000484252 RRP1BQ14684 758 aaKnown RBP21.37■■□□□ 1.01
LIMS2-215ENST00000484252 SKIDA1Q1XH10 827 aa21.37■■□□□ 1.01
LIMS2-215ENST00000484252 ODR4Q5SWX8 454 aa21.37■■□□□ 1.01
LIMS2-215ENST00000484252 RUFY4Q6ZNE9 571 aa21.37■■□□□ 1.01
LIMS2-215ENST00000484252 FLAD1Q8NFF5 587 aa21.37■■□□□ 1.01
LIMS2-215ENST00000484252 SLC35G2Q8TBE7 412 aa21.37■■□□□ 1.01
LIMS2-215ENST00000484252 CHURC1Q8WUH1 139 aa21.37■■□□□ 1.01
LIMS2-215ENST00000484252 RANBP17Q9H2T7 1088 aaKnown RBP21.37■■□□□ 1.01
LIMS2-215ENST00000484252 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.37■■□□□ 1.01
LIMS2-215ENST00000484252 SLX4Q8IY92 1834 aa21.37■■□□□ 1.01
LIMS2-215ENST00000484252 SCN9AQ15858 1988 aa21.37■■□□□ 1.01
LIMS2-215ENST00000484252 H0YGN5 161 aa21.36■■□□□ 1.01
LIMS2-215ENST00000484252 BUB1BO60566 1050 aaPredicted RBP21.36■■□□□ 1.01
LIMS2-215ENST00000484252 CYP2J2P51589 502 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms