RNA–Protein interactions for RNA: ENST00000484203.5

PTCD3-215, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-215ENST00000484203 SLC28A3Q9HAS3 691 aa7.04□□□□□ -1.28
PTCD3-215ENST00000484203 NDFIP2Q9NV92 336 aa7.04□□□□□ -1.28
PTCD3-215ENST00000484203 KLK14Q9P0G3 267 aa7.04□□□□□ -1.28
PTCD3-215ENST00000484203 PCDHA11Q9Y5I1 949 aa7.04□□□□□ -1.28
PTCD3-215ENST00000484203 TTC28Q96AY4 2481 aa7.04□□□□□ -1.28
PTCD3-215ENST00000484203 NRCAMQ92823 1304 aa7.03□□□□□ -1.28
PTCD3-215ENST00000484203 KLF18A0A0U1RQI7 1052 aa7.03□□□□□ -1.28
PTCD3-215ENST00000484203 ABHD14A-ACY1A0A1B0GW23 586 aa7.03□□□□□ -1.28
PTCD3-215ENST00000484203 C17orf102A2RUQ5 167 aa7.03□□□□□ -1.28
PTCD3-215ENST00000484203 GOLGA8AA7E2F4 631 aa7.03□□□□□ -1.28
PTCD3-215ENST00000484203 GOLGA8BA8MQT2 603 aa7.03□□□□□ -1.28
PTCD3-215ENST00000484203 PLEKHA8P1O95397 391 aa7.03□□□□□ -1.28
PTCD3-215ENST00000484203 ACRP10323 421 aa7.03□□□□□ -1.28
PTCD3-215ENST00000484203 MAPTP10636 758 aaKnown RBP7.03□□□□□ -1.28
PTCD3-215ENST00000484203 FOSL2P15408 326 aa7.03□□□□□ -1.28
PTCD3-215ENST00000484203 FGFR3P22607 806 aa7.03□□□□□ -1.28
PTCD3-215ENST00000484203 GNA11P29992 359 aa7.03□□□□□ -1.28
PTCD3-215ENST00000484203 METAP2P50579 478 aaKnown RBP eCLIP7.03□□□□□ -1.28
PTCD3-215ENST00000484203 ADCY7P51828 1080 aa7.03□□□□□ -1.28
PTCD3-215ENST00000484203 NAPAP54920 295 aa7.03□□□□□ -1.28
PTCD3-215ENST00000484203 CHMP4BP1P59074 171 aa7.03□□□□□ -1.28
PTCD3-215ENST00000484203 PDE4CQ08493 712 aa7.03□□□□□ -1.28
PTCD3-215ENST00000484203 MTMR1Q13613 665 aa7.03□□□□□ -1.28
PTCD3-215ENST00000484203 HSDL1Q3SXM5 330 aa7.03□□□□□ -1.28
PTCD3-215ENST00000484203 TMEM63BQ5T3F8 832 aa7.03□□□□□ -1.28
PTCD3-215ENST00000484203 SAMD5Q5TGI4 173 aa7.03□□□□□ -1.28
PTCD3-215ENST00000484203 TAF2Q6P1X5 1199 aa7.03□□□□□ -1.28
PTCD3-215ENST00000484203 CPLX2Q6PUV4 134 aaKnown RBP7.03□□□□□ -1.28
PTCD3-215ENST00000484203 USP17L6PQ6QN14 398 aa7.03□□□□□ -1.28
PTCD3-215ENST00000484203 LRRC8DQ7L1W4 858 aa7.03□□□□□ -1.28
PTCD3-215ENST00000484203 OTOP2Q7RTS6 562 aa7.03□□□□□ -1.28
PTCD3-215ENST00000484203 RSPH3Q86UC2 560 aa7.03□□□□□ -1.28
PTCD3-215ENST00000484203 SEPT1Q8WYJ6 367 aa7.03□□□□□ -1.28
PTCD3-215ENST00000484203 COL26A1Q96A83 441 aa7.03□□□□□ -1.28
PTCD3-215ENST00000484203 MYO19Q96H55 970 aa7.03□□□□□ -1.28
PTCD3-215ENST00000484203 CEP63Q96MT8 703 aa7.03□□□□□ -1.28
PTCD3-215ENST00000484203 GUCD1Q96NT3 240 aa7.03□□□□□ -1.28
PTCD3-215ENST00000484203 MYL10Q9BUA6 226 aa7.03□□□□□ -1.28
PTCD3-215ENST00000484203 AZI2Q9H6S1 392 aa7.03□□□□□ -1.28
PTCD3-215ENST00000484203 RIC8AQ9NPQ8 531 aa7.03□□□□□ -1.28
PTCD3-215ENST00000484203 BARHL2Q9NY43 387 aa7.03□□□□□ -1.28
PTCD3-215ENST00000484203 HDAC6Q9UBN7 1215 aa7.03□□□□□ -1.28
PTCD3-215ENST00000484203 TCEAL9Q9UHQ7 104 aa7.03□□□□□ -1.28
PTCD3-215ENST00000484203 LRFN2Q9ULH4 789 aa7.03□□□□□ -1.28
PTCD3-215ENST00000484203 PARP14Q460N5 1801 aa7.03□□□□□ -1.28
PTCD3-215ENST00000484203 MYH4Q9Y623 1939 aa7.03□□□□□ -1.28
PTCD3-215ENST00000484203 ESYT2A0FGR8 921 aa7.02□□□□□ -1.29
PTCD3-215ENST00000484203 RRN3P2A6NIE6 340 aa7.02□□□□□ -1.29
PTCD3-215ENST00000484203 CXCL10P02778 98 aa7.02□□□□□ -1.29
PTCD3-215ENST00000484203 LGALS2P05162 132 aa7.02□□□□□ -1.29
PTCD3-215ENST00000484203 FAM157BP0CG42 384 aa7.02□□□□□ -1.29
PTCD3-215ENST00000484203 PTGS1P23219 599 aa7.02□□□□□ -1.29
PTCD3-215ENST00000484203 SCNN1AP37088 669 aa7.02□□□□□ -1.29
PTCD3-215ENST00000484203 SLC26A2P50443 739 aa7.02□□□□□ -1.29
PTCD3-215ENST00000484203 MRPS9P82933 396 aaKnown RBP7.02□□□□□ -1.29
PTCD3-215ENST00000484203 TNP2Q05952 138 aa7.02□□□□□ -1.29
PTCD3-215ENST00000484203 IKBKEQ14164 716 aa7.02□□□□□ -1.29
PTCD3-215ENST00000484203 C11orf91Q3C1V1 193 aa7.02□□□□□ -1.29
PTCD3-215ENST00000484203 CEP55Q53EZ4 464 aa7.02□□□□□ -1.29
PTCD3-215ENST00000484203 COX20Q5RI15 118 aa7.02□□□□□ -1.29
PTCD3-215ENST00000484203 GDF6Q6KF10 455 aaPredicted RBP7.02□□□□□ -1.29
PTCD3-215ENST00000484203 C16orf46Q6P387 395 aa7.02□□□□□ -1.29
PTCD3-215ENST00000484203 CNKSR3Q6P9H4 555 aa7.02□□□□□ -1.29
PTCD3-215ENST00000484203 CYFIP1Q7L576 1253 aa7.02□□□□□ -1.29
PTCD3-215ENST00000484203 NIPA1Q7RTP0 329 aa7.02□□□□□ -1.29
PTCD3-215ENST00000484203 DEFB128Q7Z7B8 93 aa7.02□□□□□ -1.29
PTCD3-215ENST00000484203 RPAINQ86UA6 219 aa7.02□□□□□ -1.29
PTCD3-215ENST00000484203 SERINC5Q86VE9 423 aa7.02□□□□□ -1.29
PTCD3-215ENST00000484203 CCDC148Q8NFR7 591 aa7.02□□□□□ -1.29
PTCD3-215ENST00000484203 MAFAQ8NHW3 353 aaPredicted RBP7.02□□□□□ -1.29
PTCD3-215ENST00000484203 IL31RAQ8NI17 732 aa7.02□□□□□ -1.29
PTCD3-215ENST00000484203 ATP6V0A1Q93050 837 aa7.02□□□□□ -1.29
PTCD3-215ENST00000484203 SCLYQ96I15 445 aa7.02□□□□□ -1.29
PTCD3-215ENST00000484203 FAM161BQ96MY7 647 aa7.02□□□□□ -1.29
PTCD3-215ENST00000484203 JAKMIP1Q96N16 626 aaKnown RBP7.02□□□□□ -1.29
PTCD3-215ENST00000484203 GPR20Q99678 358 aa7.02□□□□□ -1.29
PTCD3-215ENST00000484203 SDF4Q9BRK5 362 aa7.02□□□□□ -1.29
PTCD3-215ENST00000484203 C16orf70Q9BSU1 422 aa7.02□□□□□ -1.29
PTCD3-215ENST00000484203 ALG1Q9BT22 464 aa7.02□□□□□ -1.29
PTCD3-215ENST00000484203 LRRC2Q9BYS8 371 aa7.02□□□□□ -1.29
PTCD3-215ENST00000484203 PBX4Q9BYU1 374 aa7.02□□□□□ -1.29
PTCD3-215ENST00000484203 C22orf23Q9BZE7 217 aa7.02□□□□□ -1.29
PTCD3-215ENST00000484203 TM6SF1Q9BZW5 370 aa7.02□□□□□ -1.29
PTCD3-215ENST00000484203 SAP130Q9H0E3 1048 aa7.02□□□□□ -1.29
PTCD3-215ENST00000484203 SMARCAD1Q9H4L7 1026 aa7.02□□□□□ -1.29
PTCD3-215ENST00000484203 C6orf50Q9HD87 102 aa7.02□□□□□ -1.29
PTCD3-215ENST00000484203 JADE2Q9NQC1 790 aa7.02□□□□□ -1.29
PTCD3-215ENST00000484203 ERAP1Q9NZ08 941 aa7.02□□□□□ -1.29
PTCD3-215ENST00000484203 RTEL1Q9NZ71 1219 aa7.02□□□□□ -1.29
PTCD3-215ENST00000484203 NAP1L2Q9ULW6 460 aaPredicted RBP7.02□□□□□ -1.29
PTCD3-215ENST00000484203 PCDHA6Q9UN73 950 aa7.02□□□□□ -1.29
PTCD3-215ENST00000484203 PCDHA8Q9Y5H6 950 aa7.02□□□□□ -1.29
PTCD3-215ENST00000484203 UBIAD1Q9Y5Z9 338 aa7.02□□□□□ -1.29
PTCD3-215ENST00000484203 UMODL1Q5DID0 1318 aa7.01□□□□□ -1.29
PTCD3-215ENST00000484203 SMCO2A6NFE2 343 aa7.01□□□□□ -1.29
PTCD3-215ENST00000484203 RSPH10B2B2RC85 870 aa7.01□□□□□ -1.29
PTCD3-215ENST00000484203 CPLX1O14810 134 aa7.01□□□□□ -1.29
PTCD3-215ENST00000484203 CDKL5O76039 1030 aa7.01□□□□□ -1.29
PTCD3-215ENST00000484203 CENPBP07199 599 aaPredicted RBP7.01□□□□□ -1.29
PTCD3-215ENST00000484203 RSPH10BP0C881 870 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms