RNA–Protein interactions for RNA: ENST00000483888.6

COL12A1-207, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL12A1, Length 9,637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-207ENST00000483888 PPIP5K2O43314 1243 aa10.91□□□□□ -0.66
COL12A1-207ENST00000483888 BAIAP3O94812 1187 aa10.91□□□□□ -0.66
COL12A1-207ENST00000483888 KYNUQ16719 465 aa10.91□□□□□ -0.66
COL12A1-207ENST00000483888 KLHL38Q2WGJ6 581 aa10.91□□□□□ -0.66
COL12A1-207ENST00000483888 LENG1Q96BZ8 264 aaPredicted RBP10.91□□□□□ -0.66
COL12A1-207ENST00000483888 MS4A14Q96JA4 679 aa10.91□□□□□ -0.66
COL12A1-207ENST00000483888 PLCG2P16885 1265 aa10.91□□□□□ -0.66
COL12A1-207ENST00000483888 S100A1P23297 94 aa10.91□□□□□ -0.66
COL12A1-207ENST00000483888 CDC27P30260 824 aa10.91□□□□□ -0.66
COL12A1-207ENST00000483888 B3GNT6Q6ZMB0 384 aa10.91□□□□□ -0.66
COL12A1-207ENST00000483888 CYLDQ9NQC7 956 aa10.91□□□□□ -0.66
COL12A1-207ENST00000483888 ATXN10Q9UBB4 475 aa10.91□□□□□ -0.66
COL12A1-207ENST00000483888 ZNF180Q9UJW8 692 aa10.91□□□□□ -0.66
COL12A1-207ENST00000483888 MYH6P13533 1939 aa10.91□□□□□ -0.66
COL12A1-207ENST00000483888 GOLGA8SH3BPF8 625 aa10.91□□□□□ -0.66
COL12A1-207ENST00000483888 KRT1P04264 644 aa10.91□□□□□ -0.66
COL12A1-207ENST00000483888 PICALMQ13492 652 aa10.91□□□□□ -0.66
COL12A1-207ENST00000483888 C16orf89Q6UX73 402 aa10.91□□□□□ -0.66
COL12A1-207ENST00000483888 PRPF39Q86UA1 669 aaKnown RBP10.91□□□□□ -0.66
COL12A1-207ENST00000483888 ZNF507Q8TCN5 953 aa10.91□□□□□ -0.66
COL12A1-207ENST00000483888 NUDT16Q96DE0 195 aaKnown RBP10.91□□□□□ -0.66
COL12A1-207ENST00000483888 GTSE1Q9NYZ3 720 aa10.91□□□□□ -0.66
COL12A1-207ENST00000483888 DBR1Q9UK59 544 aaKnown RBP10.91□□□□□ -0.66
COL12A1-207ENST00000483888 SOX13Q9UN79 622 aa10.91□□□□□ -0.66
COL12A1-207ENST00000483888 SYNJ1O43426 1573 aa10.91□□□□□ -0.66
COL12A1-207ENST00000483888 ADGRA3Q8IWK6 1321 aa10.91□□□□□ -0.66
COL12A1-207ENST00000483888 RGS5O15539 181 aa10.9□□□□□ -0.66
COL12A1-207ENST00000483888 SOX6P35712 828 aa10.9□□□□□ -0.66
COL12A1-207ENST00000483888 CCNHP51946 323 aaPredicted RBP10.9□□□□□ -0.66
COL12A1-207ENST00000483888 ATXN3P54252 364 aaPredicted RBP10.9□□□□□ -0.66
COL12A1-207ENST00000483888 PPP2R5BQ15173 497 aa10.9□□□□□ -0.66
COL12A1-207ENST00000483888 CARD8Q9Y2G2 431 aa10.9□□□□□ -0.66
COL12A1-207ENST00000483888 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.9□□□□□ -0.66
COL12A1-207ENST00000483888 ARMCX4Q5H9R4 360 aa10.9□□□□□ -0.66
COL12A1-207ENST00000483888 SUN5Q8TC36 379 aa10.9□□□□□ -0.66
COL12A1-207ENST00000483888 TMA16Q96EY4 203 aaKnown RBP10.9□□□□□ -0.66
COL12A1-207ENST00000483888 CD209Q9NNX6 404 aa10.9□□□□□ -0.66
COL12A1-207ENST00000483888 UBN2Q6ZU65 1347 aa10.9□□□□□ -0.66
COL12A1-207ENST00000483888 SYCP2Q9BX26 1530 aa10.9□□□□□ -0.66
COL12A1-207ENST00000483888 LINC00854A0A1B0GVQ3 168 aa10.9□□□□□ -0.66
COL12A1-207ENST00000483888 GFPT1Q06210 699 aaPredicted RBP10.9□□□□□ -0.66
COL12A1-207ENST00000483888 SLC17A8Q8NDX2 589 aa10.9□□□□□ -0.66
COL12A1-207ENST00000483888 DDX17Q92841 729 aaKnown RBP10.9□□□□□ -0.66
COL12A1-207ENST00000483888 AGBL1Q96MI9 1066 aa10.9□□□□□ -0.66
COL12A1-207ENST00000483888 ALG13Q9NP73 1137 aaKnown RBP10.9□□□□□ -0.66
COL12A1-207ENST00000483888 MPP6Q9NZW5 540 aa10.9□□□□□ -0.66
COL12A1-207ENST00000483888 MAPK11Q15759 364 aa10.9□□□□□ -0.66
COL12A1-207ENST00000483888 ZFRQ96KR1 1074 aaKnown RBP10.9□□□□□ -0.66
COL12A1-207ENST00000483888 IVNS1ABPQ9Y6Y0 642 aa10.9□□□□□ -0.66
COL12A1-207ENST00000483888 POTEFA5A3E0 1075 aa10.9□□□□□ -0.66
COL12A1-207ENST00000483888 KLHL12Q53G59 568 aa10.9□□□□□ -0.66
COL12A1-207ENST00000483888 RPS6KC1Q96S38 1066 aa10.9□□□□□ -0.66
COL12A1-207ENST00000483888 KCNK16Q96T55 309 aa10.9□□□□□ -0.66
COL12A1-207ENST00000483888 DDX47Q9H0S4 455 aaKnown RBP10.9□□□□□ -0.66
COL12A1-207ENST00000483888 CLEC4MQ9H2X3 399 aaPredicted RBP10.9□□□□□ -0.66
COL12A1-207ENST00000483888 SPATA2Q9UM82 520 aa10.9□□□□□ -0.66
COL12A1-207ENST00000483888 IZUMO2Q6UXV1 221 aa10.9□□□□□ -0.66
COL12A1-207ENST00000483888 CMTR1Q8N1G2 835 aaKnown RBP10.9□□□□□ -0.66
COL12A1-207ENST00000483888 ABHD8Q96I13 439 aa10.9□□□□□ -0.66
COL12A1-207ENST00000483888 SFMBT1Q9UHJ3 866 aa10.9□□□□□ -0.66
COL12A1-207ENST00000483888 HAO1Q9UJM8 370 aa10.9□□□□□ -0.66
COL12A1-207ENST00000483888 HSPA1AP0DMV8 641 aaKnown RBP10.9□□□□□ -0.67
COL12A1-207ENST00000483888 HSPA1BP0DMV9 641 aaKnown RBP10.9□□□□□ -0.67
COL12A1-207ENST00000483888 CTDSPL2Q05D32 466 aa10.9□□□□□ -0.67
COL12A1-207ENST00000483888 OASLQ15646 514 aaKnown RBP10.9□□□□□ -0.67
COL12A1-207ENST00000483888 PPP1R36Q96LQ0 422 aa10.9□□□□□ -0.67
COL12A1-207ENST00000483888 PRXQ9BXM0 1461 aa10.9□□□□□ -0.67
COL12A1-207ENST00000483888 B2RBV5 119 aa10.9□□□□□ -0.67
COL12A1-207ENST00000483888 PFDN6O15212 129 aa10.9□□□□□ -0.67
COL12A1-207ENST00000483888 PRR29P0C7W0 189 aa10.9□□□□□ -0.67
COL12A1-207ENST00000483888 KCNJ6P48051 423 aa10.9□□□□□ -0.67
COL12A1-207ENST00000483888 NARS2Q96I59 477 aaKnown RBP10.9□□□□□ -0.67
COL12A1-207ENST00000483888 MAGEF1Q9HAY2 307 aa10.9□□□□□ -0.67
COL12A1-207ENST00000483888 FGD5Q6ZNL6 1462 aa10.9□□□□□ -0.67
COL12A1-207ENST00000483888 PI4K2BG5E9Z4 385 aa10.89□□□□□ -0.67
COL12A1-207ENST00000483888 PRPF6O94906 941 aaKnown RBP10.89□□□□□ -0.67
COL12A1-207ENST00000483888 BCL10O95999 233 aa10.89□□□□□ -0.67
COL12A1-207ENST00000483888 CHEK2O96017 543 aa10.89□□□□□ -0.67
COL12A1-207ENST00000483888 KRT19P08727 400 aa10.89□□□□□ -0.67
COL12A1-207ENST00000483888 PYGMP11217 842 aa10.89□□□□□ -0.67
COL12A1-207ENST00000483888 ARL4CP56559 192 aa10.89□□□□□ -0.67
COL12A1-207ENST00000483888 FANCEQ9HB96 536 aa10.89□□□□□ -0.67
COL12A1-207ENST00000483888 KPNA7A9QM74 516 aa10.89□□□□□ -0.67
COL12A1-207ENST00000483888 NCAPHQ15003 741 aa10.89□□□□□ -0.67
COL12A1-207ENST00000483888 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.89□□□□□ -0.67
COL12A1-207ENST00000483888 DNAAF3Q8N9W5 541 aa10.89□□□□□ -0.67
COL12A1-207ENST00000483888 REXO4Q9GZR2 422 aaKnown RBP10.89□□□□□ -0.67
COL12A1-207ENST00000483888 RANBP17Q9H2T7 1088 aaKnown RBP10.89□□□□□ -0.67
COL12A1-207ENST00000483888 ZNF277Q9NRM2 450 aaPredicted RBP10.89□□□□□ -0.67
COL12A1-207ENST00000483888 INPP5FQ9Y2H2 1132 aa10.89□□□□□ -0.67
COL12A1-207ENST00000483888 SEMA3EO15041 775 aa10.89□□□□□ -0.67
COL12A1-207ENST00000483888 SGSM1Q2NKQ1 1148 aa10.89□□□□□ -0.67
COL12A1-207ENST00000483888 RSRC2Q7L4I2 434 aaKnown RBP10.89□□□□□ -0.67
COL12A1-207ENST00000483888 KCTD6Q8NC69 237 aa10.89□□□□□ -0.67
COL12A1-207ENST00000483888 LINC00301Q8NCQ3 95 aa10.89□□□□□ -0.67
COL12A1-207ENST00000483888 PGBD1Q96JS3 809 aa10.89□□□□□ -0.67
COL12A1-207ENST00000483888 DSCC1Q9BVC3 393 aa10.89□□□□□ -0.67
COL12A1-207ENST00000483888 GPCPD1Q9NPB8 672 aa10.89□□□□□ -0.67
COL12A1-207ENST00000483888 PNMA6EA0A0J9YXQ4 647 aa10.89□□□□□ -0.67
COL12A1-207ENST00000483888 TRHP20396 242 aaPredicted RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms