RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 ZNF236Q9UL36 1845 aa28.83■■■□□ 2.21
SHOX2-204ENST00000483851 PASKQ96RG2 1323 aa28.83■■■□□ 2.21
SHOX2-204ENST00000483851 FXR1P51114 621 aaKnown RBP eCLIP28.83■■■□□ 2.2
SHOX2-204ENST00000483851 RBM10P98175 930 aaKnown RBP28.83■■■□□ 2.2
SHOX2-204ENST00000483851 KCNA1Q09470 495 aa28.83■■■□□ 2.2
SHOX2-204ENST00000483851 SYCP1Q15431 976 aa28.83■■■□□ 2.2
SHOX2-204ENST00000483851 LY6KQ17RY6 165 aa28.83■■■□□ 2.2
SHOX2-204ENST00000483851 FAM102BQ5T8I3 360 aa28.83■■■□□ 2.2
SHOX2-204ENST00000483851 MAMDC4Q6UXC1 1216 aa28.83■■■□□ 2.2
SHOX2-204ENST00000483851 MAEAQ7L5Y9 396 aa28.83■■■□□ 2.2
SHOX2-204ENST00000483851 GPR142Q7Z601 462 aa28.83■■■□□ 2.2
SHOX2-204ENST00000483851 FAM167AQ96KS9 214 aa28.83■■■□□ 2.2
SHOX2-204ENST00000483851 ACCSQ96QU6 501 aa28.83■■■□□ 2.2
SHOX2-204ENST00000483851 TRMT1Q9NXH9 659 aaKnown RBP28.83■■■□□ 2.2
SHOX2-204ENST00000483851 UTP18Q9Y5J1 556 aaKnown RBP eCLIP28.83■■■□□ 2.2
SHOX2-204ENST00000483851 A0A1W2PQJ5 194 aa28.82■■■□□ 2.2
SHOX2-204ENST00000483851 ARMCX3Q9UH62 379 aaPredicted RBP28.82■■■□□ 2.2
SHOX2-204ENST00000483851 MCM3APO60318 1980 aa28.82■■■□□ 2.2
SHOX2-204ENST00000483851 ARIH2O95376 493 aa28.81■■■□□ 2.2
SHOX2-204ENST00000483851 EPB41P11171 864 aaKnown RBP28.81■■■□□ 2.2
SHOX2-204ENST00000483851 ATP4AP20648 1035 aa28.81■■■□□ 2.2
SHOX2-204ENST00000483851 STAT5BP51692 787 aa28.81■■■□□ 2.2
SHOX2-204ENST00000483851 DMP1Q13316 513 aaPredicted RBP28.81■■■□□ 2.2
SHOX2-204ENST00000483851 HAUS6Q7Z4H7 955 aa28.81■■■□□ 2.2
SHOX2-204ENST00000483851 PLEKHH3Q7Z736 793 aa28.81■■■□□ 2.2
SHOX2-204ENST00000483851 CPLX3Q8WVH0 158 aa28.81■■■□□ 2.2
SHOX2-204ENST00000483851 PPP1R13BQ96KQ4 1090 aa28.81■■■□□ 2.2
SHOX2-204ENST00000483851 TTYH3Q9C0H2 523 aa28.81■■■□□ 2.2
SHOX2-204ENST00000483851 DMAC2Q9NW81 257 aa28.81■■■□□ 2.2
SHOX2-204ENST00000483851 LUC7L2Q9Y383 392 aaKnown RBP28.81■■■□□ 2.2
SHOX2-204ENST00000483851 LGR5O75473 907 aa28.8■■■□□ 2.2
SHOX2-204ENST00000483851 TCF7P36402 384 aaPredicted RBP28.8■■■□□ 2.2
SHOX2-204ENST00000483851 GOLGA8FQ08AF8 430 aa28.8■■■□□ 2.2
SHOX2-204ENST00000483851 GOLGA8DPQ0D2H9 430 aa28.8■■■□□ 2.2
SHOX2-204ENST00000483851 FBXO16Q8IX29 292 aaPredicted RBP28.8■■■□□ 2.2
SHOX2-204ENST00000483851 C12orf56Q8IXR9 622 aa28.8■■■□□ 2.2
SHOX2-204ENST00000483851 TSC1Q92574 1164 aa28.8■■■□□ 2.2
SHOX2-204ENST00000483851 KCNN1Q92952 543 aa28.8■■■□□ 2.2
SHOX2-204ENST00000483851 PCYT2Q99447 389 aa28.8■■■□□ 2.2
SHOX2-204ENST00000483851 GPR20Q99678 358 aa28.8■■■□□ 2.2
SHOX2-204ENST00000483851 SH2D3AQ9BRG2 576 aa28.8■■■□□ 2.2
SHOX2-204ENST00000483851 AZI2Q9H6S1 392 aa28.8■■■□□ 2.2
SHOX2-204ENST00000483851 ADGRA2Q96PE1 1338 aa28.8■■■□□ 2.2
SHOX2-204ENST00000483851 RBM47A0AV96 593 aaKnown RBP28.8■■■□□ 2.2
SHOX2-204ENST00000483851 SLC15A5A6NIM6 579 aa28.8■■■□□ 2.2
SHOX2-204ENST00000483851 H0YCG3 227 aa28.8■■■□□ 2.2
SHOX2-204ENST00000483851 KIF2AO00139 706 aaPredicted RBP28.8■■■□□ 2.2
SHOX2-204ENST00000483851 SORBS3O60504 671 aa28.8■■■□□ 2.2
SHOX2-204ENST00000483851 PLPPR4Q7Z2D5 763 aa28.8■■■□□ 2.2
SHOX2-204ENST00000483851 DHX37Q8IY37 1157 aaKnown RBP28.8■■■□□ 2.2
SHOX2-204ENST00000483851 SYCP3Q8IZU3 236 aa28.8■■■□□ 2.2
SHOX2-204ENST00000483851 ZNF710Q8N1W2 664 aa28.8■■■□□ 2.2
SHOX2-204ENST00000483851 EDEM3Q9BZQ6 932 aa28.8■■■□□ 2.2
SHOX2-204ENST00000483851 AGPAT3Q9NRZ7 376 aa28.8■■■□□ 2.2
SHOX2-204ENST00000483851 ABHD10Q9NUJ1 306 aa28.8■■■□□ 2.2
SHOX2-204ENST00000483851 SLC5A4Q9NY91 659 aa28.8■■■□□ 2.2
SHOX2-204ENST00000483851 EXOC7Q9UPT5 735 aa28.8■■■□□ 2.2
SHOX2-204ENST00000483851 SIK3Q9Y2K2 1263 aa28.8■■■□□ 2.2
SHOX2-204ENST00000483851 NKRFO15226 690 aaKnown RBP eCLIP28.79■■■□□ 2.2
SHOX2-204ENST00000483851 TXNP10599 105 aaKnown RBP28.79■■■□□ 2.2
SHOX2-204ENST00000483851 TRIM21P19474 475 aaKnown RBP28.79■■■□□ 2.2
SHOX2-204ENST00000483851 KRT9P35527 623 aa28.79■■■□□ 2.2
SHOX2-204ENST00000483851 RFC5P40937 340 aa28.79■■■□□ 2.2
SHOX2-204ENST00000483851 SLC26A2P50443 739 aa28.79■■■□□ 2.2
SHOX2-204ENST00000483851 PEX3P56589 373 aa28.79■■■□□ 2.2
SHOX2-204ENST00000483851 MSL3Q8N5Y2 521 aaKnown RBP28.79■■■□□ 2.2
SHOX2-204ENST00000483851 GPRC5CQ9NQ84 441 aa28.79■■■□□ 2.2
SHOX2-204ENST00000483851 TTC26A0AVF1 554 aa28.78■■■□□ 2.2
SHOX2-204ENST00000483851 NOP56O00567 594 aaKnown RBP28.78■■■□□ 2.2
SHOX2-204ENST00000483851 SLC10A3P09131 477 aa28.78■■■□□ 2.2
SHOX2-204ENST00000483851 PSMC2P35998 433 aaKnown RBP28.78■■■□□ 2.2
SHOX2-204ENST00000483851 HSP90AA2PQ14568 343 aaPredicted RBP28.78■■■□□ 2.2
SHOX2-204ENST00000483851 TRMT1LQ7Z2T5 733 aaKnown RBP28.78■■■□□ 2.2
SHOX2-204ENST00000483851 EMSYQ7Z589 1322 aa28.78■■■□□ 2.2
SHOX2-204ENST00000483851 OR8K1Q8NGG5 319 aa28.78■■■□□ 2.2
SHOX2-204ENST00000483851 DHX33Q9H6R0 707 aaKnown RBP28.78■■■□□ 2.2
SHOX2-204ENST00000483851 AKAP3O75969 853 aa28.78■■■□□ 2.2
SHOX2-204ENST00000483851 DPP9Q86TI2 863 aa28.78■■■□□ 2.2
SHOX2-204ENST00000483851 TMTC1Q8IUR5 882 aa28.78■■■□□ 2.2
SHOX2-204ENST00000483851 EXOC8Q8IYI6 725 aa28.78■■■□□ 2.2
SHOX2-204ENST00000483851 MAP7D2Q96T17 732 aa28.78■■■□□ 2.2
SHOX2-204ENST00000483851 DNAJC7Q99615 494 aa28.78■■■□□ 2.2
SHOX2-204ENST00000483851 XPNPEP1Q9NQW7 623 aa28.78■■■□□ 2.2
SHOX2-204ENST00000483851 NPTX2P47972 431 aa28.77■■■□□ 2.2
SHOX2-204ENST00000483851 ZBED6P86452 979 aa28.77■■■□□ 2.2
SHOX2-204ENST00000483851 TARBP2Q15633 366 aaKnown RBP28.77■■■□□ 2.2
SHOX2-204ENST00000483851 MTERF2Q49AM1 385 aa28.77■■■□□ 2.2
SHOX2-204ENST00000483851 ZNF397Q8NF99 534 aaPredicted RBP28.77■■■□□ 2.2
SHOX2-204ENST00000483851 IFT74Q96LB3 600 aa28.77■■■□□ 2.2
SHOX2-204ENST00000483851 PCMTD1Q96MG8 357 aaPredicted RBP28.77■■■□□ 2.2
SHOX2-204ENST00000483851 PDCL3Q9H2J4 239 aa28.77■■■□□ 2.2
SHOX2-204ENST00000483851 IGF2BP3O00425 579 aaKnown RBP eCLIP28.76■■■□□ 2.2
SHOX2-204ENST00000483851 XRCC5P13010 732 aaKnown RBP28.76■■■□□ 2.2
SHOX2-204ENST00000483851 POLGP54098 1239 aaPredicted RBP28.76■■■□□ 2.2
SHOX2-204ENST00000483851 IRF5Q13568 498 aa28.76■■■□□ 2.2
SHOX2-204ENST00000483851 TSR1Q2NL82 804 aaKnown RBP28.76■■■□□ 2.2
SHOX2-204ENST00000483851 TMEM161BQ8NDZ6 487 aa28.76■■■□□ 2.2
SHOX2-204ENST00000483851 BBXQ8WY36 941 aaPredicted RBP28.76■■■□□ 2.2
SHOX2-204ENST00000483851 CCDC102AQ96A19 550 aa28.76■■■□□ 2.2
SHOX2-204ENST00000483851 CEP89Q96ST8 783 aa28.76■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms