RNA–Protein interactions for RNA: ENST00000483656.5

HDAC6-226, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-226ENST00000483656 PEX3P56589 373 aa11.14□□□□□ -0.63
HDAC6-226ENST00000483656 RTP1P59025 263 aa11.14□□□□□ -0.63
HDAC6-226ENST00000483656 TRIM32Q13049 653 aa11.14□□□□□ -0.63
HDAC6-226ENST00000483656 MKRN4PQ13434 485 aaPredicted RBP11.14□□□□□ -0.63
HDAC6-226ENST00000483656 KCNJ12Q14500 433 aa11.14□□□□□ -0.63
HDAC6-226ENST00000483656 NR1I3Q14994 352 aa11.14□□□□□ -0.63
HDAC6-226ENST00000483656 MCPH1Q8NEM0 835 aa11.14□□□□□ -0.63
HDAC6-226ENST00000483656 CD99L2Q8TCZ2 262 aa11.14□□□□□ -0.63
HDAC6-226ENST00000483656 ASAP3Q8TDY4 903 aa11.14□□□□□ -0.63
HDAC6-226ENST00000483656 SPIRE2Q8WWL2 714 aa11.14□□□□□ -0.63
HDAC6-226ENST00000483656 KIFAP3Q92845 792 aa11.14□□□□□ -0.63
HDAC6-226ENST00000483656 TMEM143Q96AN5 459 aa11.14□□□□□ -0.63
HDAC6-226ENST00000483656 NTPCRQ9BSD7 190 aaKnown RBP11.14□□□□□ -0.63
HDAC6-226ENST00000483656 POLR3FQ9H1D9 316 aaPredicted RBP11.14□□□□□ -0.63
HDAC6-226ENST00000483656 LARSQ9P2J5 1176 aaKnown RBP11.14□□□□□ -0.63
HDAC6-226ENST00000483656 TRAF3IP3Q9Y228 551 aa11.14□□□□□ -0.63
HDAC6-226ENST00000483656 UBE4BO95155 1302 aa11.13□□□□□ -0.63
HDAC6-226ENST00000483656 IGKV6-21A0A0C4DH24 114 aa11.13□□□□□ -0.63
HDAC6-226ENST00000483656 A6NJR5 290 aa11.13□□□□□ -0.63
HDAC6-226ENST00000483656 K7ENM7 598 aa11.13□□□□□ -0.63
HDAC6-226ENST00000483656 GPR25O00155 361 aa11.13□□□□□ -0.63
HDAC6-226ENST00000483656 SLC16A4O15374 487 aa11.13□□□□□ -0.63
HDAC6-226ENST00000483656 TEX33O43247 280 aa11.13□□□□□ -0.63
HDAC6-226ENST00000483656 HBP1O60381 514 aa11.13□□□□□ -0.63
HDAC6-226ENST00000483656 KIF20AO95235 890 aa11.13□□□□□ -0.63
HDAC6-226ENST00000483656 ZNF286BP0CG31 522 aa11.13□□□□□ -0.63
HDAC6-226ENST00000483656 CYBAP13498 195 aa11.13□□□□□ -0.63
HDAC6-226ENST00000483656 EEF1GP26641 437 aaKnown RBP11.13□□□□□ -0.63
HDAC6-226ENST00000483656 NPTX2P47972 431 aa11.13□□□□□ -0.63
HDAC6-226ENST00000483656 POLGP54098 1239 aaPredicted RBP11.13□□□□□ -0.63
HDAC6-226ENST00000483656 GTF2BQ00403 316 aa11.13□□□□□ -0.63
HDAC6-226ENST00000483656 MLLT1Q03111 559 aaPredicted RBP11.13□□□□□ -0.63
HDAC6-226ENST00000483656 SPAG1Q07617 926 aa11.13□□□□□ -0.63
HDAC6-226ENST00000483656 DRP2Q13474 957 aa11.13□□□□□ -0.63
HDAC6-226ENST00000483656 PTPN21Q16825 1174 aa11.13□□□□□ -0.63
HDAC6-226ENST00000483656 EDRF1Q3B7T1 1238 aa11.13□□□□□ -0.63
HDAC6-226ENST00000483656 HAUS6Q7Z4H7 955 aa11.13□□□□□ -0.63
HDAC6-226ENST00000483656 SPC24Q8NBT2 197 aa11.13□□□□□ -0.63
HDAC6-226ENST00000483656 TMEM161BQ8NDZ6 487 aa11.13□□□□□ -0.63
HDAC6-226ENST00000483656 TRAPPC12Q8WVT3 735 aa11.13□□□□□ -0.63
HDAC6-226ENST00000483656 TSG101Q99816 390 aa11.13□□□□□ -0.63
HDAC6-226ENST00000483656 KIFC3Q9BVG8 833 aa11.13□□□□□ -0.63
HDAC6-226ENST00000483656 C17orf75Q9HAS0 396 aa11.13□□□□□ -0.63
HDAC6-226ENST00000483656 RTN4Q9NQC3 1192 aaKnown RBP11.13□□□□□ -0.63
HDAC6-226ENST00000483656 TYW1Q9NV66 732 aaKnown RBP11.13□□□□□ -0.63
HDAC6-226ENST00000483656 TAB2Q9NYJ8 693 aa11.13□□□□□ -0.63
HDAC6-226ENST00000483656 ERAP1Q9NZ08 941 aa11.13□□□□□ -0.63
HDAC6-226ENST00000483656 NRBP1Q9UHY1 535 aa11.13□□□□□ -0.63
HDAC6-226ENST00000483656 FAM184BQ9ULE4 1060 aa11.13□□□□□ -0.63
HDAC6-226ENST00000483656 PPME1Q9Y570 386 aa11.13□□□□□ -0.63
HDAC6-226ENST00000483656 PCDHB13Q9Y5F0 798 aa11.13□□□□□ -0.63
HDAC6-226ENST00000483656 ADGRA3Q8IWK6 1321 aa11.12□□□□□ -0.63
HDAC6-226ENST00000483656 MYH11P35749 1972 aa11.12□□□□□ -0.63
HDAC6-226ENST00000483656 CBFA2T2O43439 604 aa11.12□□□□□ -0.63
HDAC6-226ENST00000483656 INSRRP14616 1297 aa11.12□□□□□ -0.63
HDAC6-226ENST00000483656 GLRA2P23416 452 aa11.12□□□□□ -0.63
HDAC6-226ENST00000483656 PBX1P40424 430 aa11.12□□□□□ -0.63
HDAC6-226ENST00000483656 FKBP3Q00688 224 aaKnown RBP11.12□□□□□ -0.63
HDAC6-226ENST00000483656 KIF22Q14807 665 aa11.12□□□□□ -0.63
HDAC6-226ENST00000483656 NFIL3Q16649 462 aa11.12□□□□□ -0.63
HDAC6-226ENST00000483656 MFSD14CQ5VZR4 134 aa11.12□□□□□ -0.63
HDAC6-226ENST00000483656 PPP4R3CPQ6ZMV5 832 aa11.12□□□□□ -0.63
HDAC6-226ENST00000483656 TAS1R3Q7RTX0 852 aa11.12□□□□□ -0.63
HDAC6-226ENST00000483656 FILIP1Q7Z7B0 1213 aa11.12□□□□□ -0.63
HDAC6-226ENST00000483656 TLK2Q86UE8 772 aa11.12□□□□□ -0.63
HDAC6-226ENST00000483656 KAT2BQ92831 832 aa11.12□□□□□ -0.63
HDAC6-226ENST00000483656 ZBTB10Q96DT7 871 aa11.12□□□□□ -0.63
HDAC6-226ENST00000483656 CNOT6LQ96LI5 555 aaKnown RBP11.12□□□□□ -0.63
HDAC6-226ENST00000483656 CEP63Q96MT8 703 aa11.12□□□□□ -0.63
HDAC6-226ENST00000483656 VPS16Q9H269 839 aa11.12□□□□□ -0.63
HDAC6-226ENST00000483656 DMAC2Q9NW81 257 aa11.12□□□□□ -0.63
HDAC6-226ENST00000483656 SRRDQ9UH36 339 aa11.12□□□□□ -0.63
HDAC6-226ENST00000483656 Q9Y3F1 56 aa11.12□□□□□ -0.63
HDAC6-226ENST00000483656 CCDC169A6NNP5 214 aa11.11□□□□□ -0.63
HDAC6-226ENST00000483656 H3BRB1 525 aa11.11□□□□□ -0.63
HDAC6-226ENST00000483656 CLIC2O15247 247 aa11.11□□□□□ -0.63
HDAC6-226ENST00000483656 CALUO43852 315 aaPredicted RBP11.11□□□□□ -0.63
HDAC6-226ENST00000483656 C22orf31O95567 290 aa11.11□□□□□ -0.63
HDAC6-226ENST00000483656 NR3C1P04150 777 aa11.11□□□□□ -0.63
HDAC6-226ENST00000483656 ELNP15502 786 aa11.11□□□□□ -0.63
HDAC6-226ENST00000483656 CACNB2Q08289 660 aaPredicted RBP11.11□□□□□ -0.63
HDAC6-226ENST00000483656 TBC1D8BQ0IIM8 1120 aa11.11□□□□□ -0.63
HDAC6-226ENST00000483656 DMP1Q13316 513 aaPredicted RBP11.11□□□□□ -0.63
HDAC6-226ENST00000483656 ADAM9Q13443 819 aa11.11□□□□□ -0.63
HDAC6-226ENST00000483656 ALCAMQ13740 583 aa11.11□□□□□ -0.63
HDAC6-226ENST00000483656 DGKDQ16760 1214 aa11.11□□□□□ -0.63
HDAC6-226ENST00000483656 ZNF484Q5JVG2 852 aa11.11□□□□□ -0.63
HDAC6-226ENST00000483656 MIIPQ5JXC2 388 aa11.11□□□□□ -0.63
HDAC6-226ENST00000483656 STXBP4Q6ZWJ1 553 aa11.11□□□□□ -0.63
HDAC6-226ENST00000483656 VSTM4Q8IW00 320 aa11.11□□□□□ -0.63
HDAC6-226ENST00000483656 FAM114A1Q8IWE2 563 aa11.11□□□□□ -0.63
HDAC6-226ENST00000483656 LINC01465Q8N7H1 131 aa11.11□□□□□ -0.63
HDAC6-226ENST00000483656 SLC7A3Q8WY07 619 aa11.11□□□□□ -0.63
HDAC6-226ENST00000483656 KCNN1Q92952 543 aa11.11□□□□□ -0.63
HDAC6-226ENST00000483656 ACCSQ96QU6 501 aa11.11□□□□□ -0.63
HDAC6-226ENST00000483656 CTAGE1Q96RT6 745 aa11.11□□□□□ -0.63
HDAC6-226ENST00000483656 TUT1Q9H6E5 874 aaKnown RBP11.11□□□□□ -0.63
HDAC6-226ENST00000483656 KMT5AQ9NQR1 393 aa11.11□□□□□ -0.63
HDAC6-226ENST00000483656 AGPAT3Q9NRZ7 376 aa11.11□□□□□ -0.63
HDAC6-226ENST00000483656 ARHGAP28Q9P2N2 729 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms