RNA–Protein interactions for RNA: ENST00000483631.1

HPS4-213, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 737 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-213ENST00000483631 C1QTNF1Q9BXJ1 281 aa22.3■■□□□ 1.16
HPS4-213ENST00000483631 BRMS1Q9HCU9 246 aa22.3■■□□□ 1.16
HPS4-213ENST00000483631 VAV3Q9UKW4 847 aa22.3■■□□□ 1.16
HPS4-213ENST00000483631 PCDHB12Q9Y5F1 795 aa22.3■■□□□ 1.16
HPS4-213ENST00000483631 PIK3AP1Q6ZUJ8 805 aa22.29■■□□□ 1.16
HPS4-213ENST00000483631 FAM178BQ8IXR5 827 aa22.29■■□□□ 1.16
HPS4-213ENST00000483631 KLHL23Q8NBE8 558 aa22.29■■□□□ 1.16
HPS4-213ENST00000483631 RSPH1Q8WYR4 309 aa22.29■■□□□ 1.16
HPS4-213ENST00000483631 TMEM117Q9H0C3 514 aa22.29■■□□□ 1.16
HPS4-213ENST00000483631 ALG13Q9NP73 1137 aaKnown RBP22.29■■□□□ 1.16
HPS4-213ENST00000483631 PLXNA4Q9HCM2 1894 aa22.28■■□□□ 1.16
HPS4-213ENST00000483631 TBKBP1A7MCY6 615 aa22.28■■□□□ 1.16
HPS4-213ENST00000483631 CCNT1O60563 726 aaKnown RBP22.28■■□□□ 1.16
HPS4-213ENST00000483631 MAFO75444 373 aaPredicted RBP22.28■■□□□ 1.16
HPS4-213ENST00000483631 P4HBP07237 508 aaKnown RBP22.28■■□□□ 1.16
HPS4-213ENST00000483631 FDPSP14324 419 aaKnown RBP22.28■■□□□ 1.16
HPS4-213ENST00000483631 KRT2P35908 639 aa22.28■■□□□ 1.16
HPS4-213ENST00000483631 QARSP47897 775 aaKnown RBP22.28■■□□□ 1.16
HPS4-213ENST00000483631 GATMP50440 423 aa22.28■■□□□ 1.16
HPS4-213ENST00000483631 HYAL1Q12794 435 aa22.28■■□□□ 1.16
HPS4-213ENST00000483631 ME3Q16798 604 aa22.28■■□□□ 1.16
HPS4-213ENST00000483631 MTERF2Q49AM1 385 aa22.28■■□□□ 1.16
HPS4-213ENST00000483631 FAM102BQ5T8I3 360 aa22.28■■□□□ 1.16
HPS4-213ENST00000483631 ZNF410Q86VK4 478 aa22.28■■□□□ 1.16
HPS4-213ENST00000483631 SLFN12Q8IYM2 578 aa22.28■■□□□ 1.16
HPS4-213ENST00000483631 GCOM2Q9BZD3 368 aaPredicted RBP22.28■■□□□ 1.16
HPS4-213ENST00000483631 INO80BQ9C086 356 aaPredicted RBP22.28■■□□□ 1.16
HPS4-213ENST00000483631 CHST12Q9NRB3 414 aa22.28■■□□□ 1.16
HPS4-213ENST00000483631 CLDND1Q9NY35 253 aa22.28■■□□□ 1.16
HPS4-213ENST00000483631 DACT1Q9NYF0 836 aa22.28■■□□□ 1.16
HPS4-213ENST00000483631 ANO5Q75V66 913 aa22.27■■□□□ 1.16
HPS4-213ENST00000483631 OXER1Q8TDS5 423 aa22.27■■□□□ 1.16
HPS4-213ENST00000483631 POF1BQ8WVV4 589 aa22.27■■□□□ 1.16
HPS4-213ENST00000483631 NLRP7Q8WX94 980 aa22.27■■□□□ 1.16
HPS4-213ENST00000483631 HAS1Q92839 578 aa22.27■■□□□ 1.16
HPS4-213ENST00000483631 SCLT1Q96NL6 688 aa22.27■■□□□ 1.16
HPS4-213ENST00000483631 TRAIPQ9BWF2 469 aa22.27■■□□□ 1.16
HPS4-213ENST00000483631 PRKAG3Q9UGI9 489 aa22.27■■□□□ 1.16
HPS4-213ENST00000483631 A0A0U1RQF3 1178 aa22.26■■□□□ 1.15
HPS4-213ENST00000483631 FSD2A1L4K1 749 aa22.26■■□□□ 1.15
HPS4-213ENST00000483631 DDX11L8A8MPP1 907 aa22.26■■□□□ 1.15
HPS4-213ENST00000483631 EML1O00423 815 aa22.26■■□□□ 1.15
HPS4-213ENST00000483631 EOMESO95936 686 aa22.26■■□□□ 1.15
HPS4-213ENST00000483631 LAG3P18627 525 aa22.26■■□□□ 1.15
HPS4-213ENST00000483631 LTBRP36941 435 aa22.26■■□□□ 1.15
HPS4-213ENST00000483631 NEK4P51957 841 aa22.26■■□□□ 1.15
HPS4-213ENST00000483631 EPHA7Q15375 998 aa22.26■■□□□ 1.15
HPS4-213ENST00000483631 PDE12Q6L8Q7 609 aaKnown RBP22.26■■□□□ 1.15
HPS4-213ENST00000483631 ECHDC2Q86YB7 292 aa22.26■■□□□ 1.15
HPS4-213ENST00000483631 C4orf19Q8IY42 314 aa22.26■■□□□ 1.15
HPS4-213ENST00000483631 NSUN7Q8NE18 718 aaKnown RBP22.26■■□□□ 1.15
HPS4-213ENST00000483631 TNFRSF25Q93038 417 aa22.26■■□□□ 1.15
HPS4-213ENST00000483631 GJB4Q9NTQ9 266 aa22.26■■□□□ 1.15
HPS4-213ENST00000483631 H3BQ06 376 aaPredicted RBP22.25■■□□□ 1.15
HPS4-213ENST00000483631 BAG4O95429 457 aaKnown RBP22.25■■□□□ 1.15
HPS4-213ENST00000483631 IL9P15248 144 aa22.25■■□□□ 1.15
HPS4-213ENST00000483631 SFPQP23246 707 aaKnown RBP eCLIP22.25■■□□□ 1.15
HPS4-213ENST00000483631 DNAJB1P25685 340 aa22.25■■□□□ 1.15
HPS4-213ENST00000483631 DRP2Q13474 957 aa22.25■■□□□ 1.15
HPS4-213ENST00000483631 SPOUT1Q5T280 376 aaKnown RBP22.25■■□□□ 1.15
HPS4-213ENST00000483631 LRRC43Q8N309 656 aa22.25■■□□□ 1.15
HPS4-213ENST00000483631 CYP26B1Q9NR63 512 aa22.25■■□□□ 1.15
HPS4-213ENST00000483631 TYW1Q9NV66 732 aaKnown RBP22.25■■□□□ 1.15
HPS4-213ENST00000483631 LZTS1Q9Y250 596 aa22.25■■□□□ 1.15
HPS4-213ENST00000483631 GAS2O43903 313 aaKnown RBP22.24■■□□□ 1.15
HPS4-213ENST00000483631 MARCH6O60337 910 aa22.24■■□□□ 1.15
HPS4-213ENST00000483631 FGFR1P11362 822 aa22.24■■□□□ 1.15
HPS4-213ENST00000483631 ADAM15Q13444 863 aa22.24■■□□□ 1.15
HPS4-213ENST00000483631 ZNF598Q86UK7 904 aaKnown RBP22.24■■□□□ 1.15
HPS4-213ENST00000483631 GJD3Q8N144 294 aa22.24■■□□□ 1.15
HPS4-213ENST00000483631 NECAB1Q8N987 351 aa22.24■■□□□ 1.15
HPS4-213ENST00000483631 COLGALT1Q8NBJ5 622 aa22.24■■□□□ 1.15
HPS4-213ENST00000483631 SLC7A3Q8WY07 619 aa22.24■■□□□ 1.15
HPS4-213ENST00000483631 CASD1Q96PB1 797 aa22.24■■□□□ 1.15
HPS4-213ENST00000483631 CWH43Q9H720 699 aa22.24■■□□□ 1.15
HPS4-213ENST00000483631 RNF19AQ9NV58 838 aa22.24■■□□□ 1.15
HPS4-213ENST00000483631 SUCLA2Q9P2R7 463 aaPredicted RBP22.24■■□□□ 1.15
HPS4-213ENST00000483631 CARNS1A5YM72 827 aa22.23■■□□□ 1.15
HPS4-213ENST00000483631 TMEM150BA6NC51 233 aa22.23■■□□□ 1.15
HPS4-213ENST00000483631 FGF18O76093 207 aa22.23■■□□□ 1.15
HPS4-213ENST00000483631 LARGE1O95461 756 aa22.23■■□□□ 1.15
HPS4-213ENST00000483631 SKIP12755 728 aa22.23■■□□□ 1.15
HPS4-213ENST00000483631 IBSPP21815 317 aaPredicted RBP22.23■■□□□ 1.15
HPS4-213ENST00000483631 RFC5P40937 340 aa22.23■■□□□ 1.15
HPS4-213ENST00000483631 PLCB3Q01970 1234 aa22.23■■□□□ 1.15
HPS4-213ENST00000483631 SPIRE1Q08AE8 756 aa22.23■■□□□ 1.15
HPS4-213ENST00000483631 NR5A1Q13285 461 aa22.23■■□□□ 1.15
HPS4-213ENST00000483631 EARS2Q5JPH6 523 aaKnown RBP22.23■■□□□ 1.15
HPS4-213ENST00000483631 OTUD6AQ7L8S5 288 aa22.23■■□□□ 1.15
HPS4-213ENST00000483631 POTEDQ86YR6 584 aa22.23■■□□□ 1.15
HPS4-213ENST00000483631 ABI1Q8IZP0 508 aa22.23■■□□□ 1.15
HPS4-213ENST00000483631 EFHBQ8N7U6 833 aa22.23■■□□□ 1.15
HPS4-213ENST00000483631 DHX33Q9H6R0 707 aaKnown RBP22.23■■□□□ 1.15
HPS4-213ENST00000483631 TLR9Q9NR96 1032 aa22.23■■□□□ 1.15
HPS4-213ENST00000483631 A0A087WZ62 844 aa22.22■■□□□ 1.15
HPS4-213ENST00000483631 CENPBP07199 599 aaPredicted RBP22.22■■□□□ 1.15
HPS4-213ENST00000483631 PPM1AP35813 382 aa22.22■■□□□ 1.15
HPS4-213ENST00000483631 TRIM29Q14134 588 aa22.22■■□□□ 1.15
HPS4-213ENST00000483631 EP400NLQ6ZTU2 488 aa22.22■■□□□ 1.15
HPS4-213ENST00000483631 RHPN2Q8IUC4 686 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms