RNA–Protein interactions for RNA: ENST00000482596.1

CHD6-209, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best)

Gene CHD6, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-209ENST00000482596 LILRB3O75022 631 aa7.74□□□□□ -1.17
CHD6-209ENST00000482596 PDIA4P13667 645 aaKnown RBP7.74□□□□□ -1.17
CHD6-209ENST00000482596 IL15P40933 162 aaPredicted RBP7.74□□□□□ -1.17
CHD6-209ENST00000482596 SATB1Q01826 763 aa7.74□□□□□ -1.17
CHD6-209ENST00000482596 PLCB3Q01970 1234 aa7.74□□□□□ -1.17
CHD6-209ENST00000482596 PRKCQQ04759 706 aa7.74□□□□□ -1.17
CHD6-209ENST00000482596 KLRC3Q07444 240 aa7.74□□□□□ -1.17
CHD6-209ENST00000482596 HTR4Q13639 388 aa7.74□□□□□ -1.17
CHD6-209ENST00000482596 FAM26DQ5JW98 314 aa7.74□□□□□ -1.17
CHD6-209ENST00000482596 DAB2IPQ5VWQ8 1189 aa7.74□□□□□ -1.17
CHD6-209ENST00000482596 HEATR6Q6AI08 1181 aaKnown RBP7.74□□□□□ -1.17
CHD6-209ENST00000482596 CEP68Q76N32 757 aa7.74□□□□□ -1.17
CHD6-209ENST00000482596 CABP7Q86V35 215 aa7.74□□□□□ -1.17
CHD6-209ENST00000482596 PRR7Q8TB68 274 aa7.74□□□□□ -1.17
CHD6-209ENST00000482596 PIP4K2CQ8TBX8 421 aa7.74□□□□□ -1.17
CHD6-209ENST00000482596 SLC22A17Q8WUG5 538 aa7.74□□□□□ -1.17
CHD6-209ENST00000482596 AUTS2Q8WXX7 1259 aa7.74□□□□□ -1.17
CHD6-209ENST00000482596 CWH43Q9H720 699 aa7.74□□□□□ -1.17
CHD6-209ENST00000482596 TYW1Q9NV66 732 aaKnown RBP7.74□□□□□ -1.17
CHD6-209ENST00000482596 PAXBP1Q9Y5B6 917 aa7.74□□□□□ -1.17
CHD6-209ENST00000482596 BAZ2AQ9UIF9 1905 aaKnown RBP7.74□□□□□ -1.17
CHD6-209ENST00000482596 NF1P21359 2839 aa7.74□□□□□ -1.17
CHD6-209ENST00000482596 LRBAP50851 2863 aa7.73□□□□□ -1.17
CHD6-209ENST00000482596 C17orf102A2RUQ5 167 aa7.73□□□□□ -1.17
CHD6-209ENST00000482596 TBKBP1A7MCY6 615 aa7.73□□□□□ -1.17
CHD6-209ENST00000482596 ANHXE9PGG2 379 aa7.73□□□□□ -1.17
CHD6-209ENST00000482596 GH1P01241 217 aa7.73□□□□□ -1.17
CHD6-209ENST00000482596 HOXC8P31273 242 aa7.73□□□□□ -1.17
CHD6-209ENST00000482596 MPLP40238 635 aa7.73□□□□□ -1.17
CHD6-209ENST00000482596 TFCP2Q12800 502 aa7.73□□□□□ -1.17
CHD6-209ENST00000482596 SMC1AQ14683 1233 aaKnown RBP7.73□□□□□ -1.17
CHD6-209ENST00000482596 WTAPQ15007 396 aa7.73□□□□□ -1.17
CHD6-209ENST00000482596 MYSM1Q5VVJ2 828 aa7.73□□□□□ -1.17
CHD6-209ENST00000482596 LSM14AQ8ND56 463 aaKnown RBP7.73□□□□□ -1.17
CHD6-209ENST00000482596 NXPE3Q969Y0 559 aa7.73□□□□□ -1.17
CHD6-209ENST00000482596 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.73□□□□□ -1.17
CHD6-209ENST00000482596 RNPEPQ9H4A4 650 aa7.73□□□□□ -1.17
CHD6-209ENST00000482596 AGO3Q9H9G7 860 aaKnown RBP7.73□□□□□ -1.17
CHD6-209ENST00000482596 KANSL2Q9H9L4 492 aa7.73□□□□□ -1.17
CHD6-209ENST00000482596 PIH1D3Q9NQM4 214 aaKnown RBP7.73□□□□□ -1.17
CHD6-209ENST00000482596 MCM9Q9NXL9 1143 aa7.73□□□□□ -1.17
CHD6-209ENST00000482596 PKD2L1Q9P0L9 805 aa7.73□□□□□ -1.17
CHD6-209ENST00000482596 ADD3Q9UEY8 706 aaKnown RBP7.73□□□□□ -1.17
CHD6-209ENST00000482596 PUF60Q9UHX1 559 aaKnown RBP7.73□□□□□ -1.17
CHD6-209ENST00000482596 DDX41Q9UJV9 622 aaKnown RBP7.73□□□□□ -1.17
CHD6-209ENST00000482596 LRRK2Q5S007 2527 aa7.73□□□□□ -1.17
CHD6-209ENST00000482596 CAND2O75155 1236 aa7.72□□□□□ -1.17
CHD6-209ENST00000482596 GP1BBP13224 206 aa7.72□□□□□ -1.17
CHD6-209ENST00000482596 EDNRBP24530 442 aa7.72□□□□□ -1.17
CHD6-209ENST00000482596 SIM1P81133 766 aaPredicted RBP7.72□□□□□ -1.17
CHD6-209ENST00000482596 CALD1Q05682 793 aaKnown RBP7.72□□□□□ -1.17
CHD6-209ENST00000482596 FAM102BQ5T8I3 360 aa7.72□□□□□ -1.17
CHD6-209ENST00000482596 SLC30A10Q6XR72 485 aa7.72□□□□□ -1.17
CHD6-209ENST00000482596 TPRG1Q6ZUI0 275 aa7.72□□□□□ -1.17
CHD6-209ENST00000482596 KBTBD6Q86V97 674 aa7.72□□□□□ -1.17
CHD6-209ENST00000482596 FGF14Q92915 247 aa7.72□□□□□ -1.17
CHD6-209ENST00000482596 SFXN1Q9H9B4 322 aa7.72□□□□□ -1.17
CHD6-209ENST00000482596 ANKMY1Q9P2S6 941 aa7.72□□□□□ -1.17
CHD6-209ENST00000482596 FEM1BQ9UK73 627 aa7.72□□□□□ -1.17
CHD6-209ENST00000482596 DOCK6Q96HP0 2047 aa7.72□□□□□ -1.17
CHD6-209ENST00000482596 EML5Q05BV3 1969 aa7.71□□□□□ -1.17
CHD6-209ENST00000482596 A0A087WV48 116 aa7.71□□□□□ -1.18
CHD6-209ENST00000482596 CYP2D7A0A087X1C5 515 aa7.71□□□□□ -1.18
CHD6-209ENST00000482596 LNP1A1A4G5 178 aa7.71□□□□□ -1.18
CHD6-209ENST00000482596 NFIBO00712 420 aa7.71□□□□□ -1.18
CHD6-209ENST00000482596 CAPN9O14815 690 aa7.71□□□□□ -1.18
CHD6-209ENST00000482596 NCAM2O15394 837 aa7.71□□□□□ -1.18
CHD6-209ENST00000482596 SORBS3O60504 671 aa7.71□□□□□ -1.18
CHD6-209ENST00000482596 CXCL14O95715 111 aa7.71□□□□□ -1.18
CHD6-209ENST00000482596 STAG3L1P0CL83 205 aa7.71□□□□□ -1.18
CHD6-209ENST00000482596 SMIM10L2AP0DMW4 78 aa7.71□□□□□ -1.18
CHD6-209ENST00000482596 SMIM10L2BP0DMW5 78 aa7.71□□□□□ -1.18
CHD6-209ENST00000482596 LAMP2P13473 410 aa7.71□□□□□ -1.18
CHD6-209ENST00000482596 SCG2P13521 617 aa7.71□□□□□ -1.18
CHD6-209ENST00000482596 ITPKBP27987 946 aa7.71□□□□□ -1.18
CHD6-209ENST00000482596 CD52P31358 61 aa7.71□□□□□ -1.18
CHD6-209ENST00000482596 CNR2P34972 360 aa7.71□□□□□ -1.18
CHD6-209ENST00000482596 RAP1GAPP47736 663 aa7.71□□□□□ -1.18
CHD6-209ENST00000482596 CDK8P49336 464 aa7.71□□□□□ -1.18
CHD6-209ENST00000482596 MGAT3Q09327 533 aa7.71□□□□□ -1.18
CHD6-209ENST00000482596 UAP1L1Q3KQV9 507 aa7.71□□□□□ -1.18
CHD6-209ENST00000482596 TKFCQ3LXA3 575 aa7.71□□□□□ -1.18
CHD6-209ENST00000482596 PKDCCQ504Y2 493 aa7.71□□□□□ -1.18
CHD6-209ENST00000482596 C4orf17Q53FE4 359 aa7.71□□□□□ -1.18
CHD6-209ENST00000482596 GORABQ5T7V8 394 aa7.71□□□□□ -1.18
CHD6-209ENST00000482596 PARM1Q6UWI2 310 aa7.71□□□□□ -1.18
CHD6-209ENST00000482596 RAB44Q7Z6P3 723 aaPredicted RBP7.71□□□□□ -1.18
CHD6-209ENST00000482596 LONP2Q86WA8 852 aa7.71□□□□□ -1.18
CHD6-209ENST00000482596 CHMP4CQ96CF2 233 aa7.71□□□□□ -1.18
CHD6-209ENST00000482596 USP26Q9BXU7 913 aa7.71□□□□□ -1.18
CHD6-209ENST00000482596 USP44Q9H0E7 712 aa7.71□□□□□ -1.18
CHD6-209ENST00000482596 CHRDQ9H2X0 955 aa7.71□□□□□ -1.18
CHD6-209ENST00000482596 KDM4CQ9H3R0 1056 aa7.71□□□□□ -1.18
CHD6-209ENST00000482596 PRORYQ9H606 182 aa7.71□□□□□ -1.18
CHD6-209ENST00000482596 WDR6Q9NNW5 1121 aaKnown RBP7.71□□□□□ -1.18
CHD6-209ENST00000482596 VPS45Q9NRW7 570 aa7.71□□□□□ -1.18
CHD6-209ENST00000482596 SWAP70Q9UH65 585 aa7.71□□□□□ -1.18
CHD6-209ENST00000482596 NDRG2Q9UN36 371 aaKnown RBP7.71□□□□□ -1.18
CHD6-209ENST00000482596 USP9YO00507 2555 aaPredicted RBP7.71□□□□□ -1.18
CHD6-209ENST00000482596 CLUHO75153 1309 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms