RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 MTUS1Q9ULD2 1270 aa13.74□□□□□ -0.21
VPS52-218ENST00000482399 GOLGA8IPA6NC78 632 aa13.74□□□□□ -0.21
VPS52-218ENST00000482399 GOLGA8JA6NMD2 632 aa13.74□□□□□ -0.21
VPS52-218ENST00000482399 FTLP02792 175 aaPredicted RBP13.74□□□□□ -0.21
VPS52-218ENST00000482399 ARHGAP4P98171 946 aa13.74□□□□□ -0.21
VPS52-218ENST00000482399 SLFN13Q68D06 897 aa13.74□□□□□ -0.21
VPS52-218ENST00000482399 CCDC174Q6PII3 467 aa13.74□□□□□ -0.21
VPS52-218ENST00000482399 JAMLQ86YT9 394 aa13.74□□□□□ -0.21
VPS52-218ENST00000482399 NOD2Q9HC29 1040 aa13.74□□□□□ -0.21
VPS52-218ENST00000482399 AJAP1Q9UKB5 411 aaPredicted RBP13.74□□□□□ -0.21
VPS52-218ENST00000482399 USTQ9Y2C2 406 aa13.74□□□□□ -0.21
VPS52-218ENST00000482399 ZBTB5O15062 677 aa13.74□□□□□ -0.21
VPS52-218ENST00000482399 KRT5P13647 590 aa13.74□□□□□ -0.21
VPS52-218ENST00000482399 PAX7P23759 505 aa13.74□□□□□ -0.21
VPS52-218ENST00000482399 SLC8A1P32418 973 aa13.74□□□□□ -0.21
VPS52-218ENST00000482399 GCLMP48507 274 aa13.74□□□□□ -0.21
VPS52-218ENST00000482399 SEPT7Q16181 437 aaKnown RBP13.74□□□□□ -0.21
VPS52-218ENST00000482399 KIAA1755Q5JYT7 1200 aa13.74□□□□□ -0.21
VPS52-218ENST00000482399 C16orf86Q6ZW13 317 aa13.74□□□□□ -0.21
VPS52-218ENST00000482399 IRF2BP2Q7Z5L9 587 aa13.74□□□□□ -0.21
VPS52-218ENST00000482399 KIAA0825Q8IV33 1275 aa13.74□□□□□ -0.21
VPS52-218ENST00000482399 ARHGEF26Q96DR7 871 aa13.74□□□□□ -0.21
VPS52-218ENST00000482399 AIPL1Q9NZN9 384 aa13.74□□□□□ -0.21
VPS52-218ENST00000482399 LMTK3Q96Q04 1460 aa13.73□□□□□ -0.21
VPS52-218ENST00000482399 CCT8L1PA6NM43 557 aa13.73□□□□□ -0.21
VPS52-218ENST00000482399 H0Y3Z8 333 aa13.73□□□□□ -0.21
VPS52-218ENST00000482399 LCA5LO95447 670 aa13.73□□□□□ -0.21
VPS52-218ENST00000482399 MARCKSL1P49006 195 aa13.73□□□□□ -0.21
VPS52-218ENST00000482399 ERFP50548 548 aa13.73□□□□□ -0.21
VPS52-218ENST00000482399 SESN3P58005 492 aa13.73□□□□□ -0.21
VPS52-218ENST00000482399 MYL7Q01449 175 aa13.73□□□□□ -0.21
VPS52-218ENST00000482399 MTM1Q13496 603 aa13.73□□□□□ -0.21
VPS52-218ENST00000482399 SHROOM1Q2M3G4 852 aaPredicted RBP13.73□□□□□ -0.21
VPS52-218ENST00000482399 ACCSLQ4AC99 568 aa13.73□□□□□ -0.21
VPS52-218ENST00000482399 CCDC137Q6PK04 289 aaKnown RBP13.73□□□□□ -0.21
VPS52-218ENST00000482399 CLEC4GQ6UXB4 293 aa13.73□□□□□ -0.21
VPS52-218ENST00000482399 LRIG3Q6UXM1 1119 aa13.73□□□□□ -0.21
VPS52-218ENST00000482399 PRCCQ92733 491 aaPredicted RBP13.73□□□□□ -0.21
VPS52-218ENST00000482399 ZNF622Q969S3 477 aaKnown RBP eCLIP13.73□□□□□ -0.218e-7■□□□□ 10.9
VPS52-218ENST00000482399 RUSC1Q9BVN2 902 aa13.73□□□□□ -0.21
VPS52-218ENST00000482399 HEMGNQ9BXL5 484 aa13.73□□□□□ -0.21
VPS52-218ENST00000482399 ZC3H12CQ9C0D7 883 aaKnown RBP13.73□□□□□ -0.21
VPS52-218ENST00000482399 METTL14Q9HCE5 456 aaKnown RBP13.73□□□□□ -0.21
VPS52-218ENST00000482399 ERVK-5Q9HDB9 667 aa13.73□□□□□ -0.21
VPS52-218ENST00000482399 MYH7P12883 1935 aa13.73□□□□□ -0.21
VPS52-218ENST00000482399 DIAPH2O60879 1101 aa13.73□□□□□ -0.21
VPS52-218ENST00000482399 LMNB1P20700 586 aa13.73□□□□□ -0.21
VPS52-218ENST00000482399 PSMC2P35998 433 aaKnown RBP13.73□□□□□ -0.21
VPS52-218ENST00000482399 GPSM2P81274 684 aa13.73□□□□□ -0.21
VPS52-218ENST00000482399 C2CD6Q53TS8 623 aa13.73□□□□□ -0.21
VPS52-218ENST00000482399 NSMCE1Q8WV22 266 aa13.73□□□□□ -0.21
VPS52-218ENST00000482399 ERP44Q9BS26 406 aa13.73□□□□□ -0.21
VPS52-218ENST00000482399 GANQ9H2C0 597 aa13.73□□□□□ -0.21
VPS52-218ENST00000482399 SLITRK6Q9H5Y7 841 aa13.73□□□□□ -0.21
VPS52-218ENST00000482399 ABCF3Q9NUQ8 709 aa13.73□□□□□ -0.21
VPS52-218ENST00000482399 ALG6Q9Y672 507 aa13.73□□□□□ -0.21
VPS52-218ENST00000482399 DLATP10515 647 aaKnown RBP13.72□□□□□ -0.21
VPS52-218ENST00000482399 SSTR3P32745 418 aaPredicted RBP13.72□□□□□ -0.21
VPS52-218ENST00000482399 SP4Q02446 784 aa13.72□□□□□ -0.21
VPS52-218ENST00000482399 ZNF543Q08ER8 600 aa13.72□□□□□ -0.21
VPS52-218ENST00000482399 TAOK1Q7L7X3 1001 aa13.72□□□□□ -0.21
VPS52-218ENST00000482399 SRRM1Q8IYB3 904 aaKnown RBP13.72□□□□□ -0.21
VPS52-218ENST00000482399 ZNF526Q8TF50 670 aaPredicted RBP13.72□□□□□ -0.21
VPS52-218ENST00000482399 KRT35Q92764 455 aa13.72□□□□□ -0.21
VPS52-218ENST00000482399 POP1Q99575 1024 aaKnown RBP13.72□□□□□ -0.21
VPS52-218ENST00000482399 CNOT10Q9H9A5 744 aaKnown RBP13.72□□□□□ -0.21
VPS52-218ENST00000482399 THAP12O43422 761 aa13.72□□□□□ -0.21
VPS52-218ENST00000482399 UPP2O95045 317 aa13.72□□□□□ -0.21
VPS52-218ENST00000482399 ZNF449Q6P9G9 518 aa13.72□□□□□ -0.21
VPS52-218ENST00000482399 NT5DC3Q86UY8 548 aa13.72□□□□□ -0.21
VPS52-218ENST00000482399 PALB2Q86YC2 1186 aa13.72□□□□□ -0.21
VPS52-218ENST00000482399 TEX2Q8IWB9 1127 aa13.72□□□□□ -0.21
VPS52-218ENST00000482399 ACTRT1Q8TDG2 376 aa13.72□□□□□ -0.21
VPS52-218ENST00000482399 SLC20A1Q8WUM9 679 aa13.72□□□□□ -0.21
VPS52-218ENST00000482399 RFFLQ8WZ73 363 aa13.72□□□□□ -0.21
VPS52-218ENST00000482399 SYN2Q92777 582 aaPredicted RBP13.72□□□□□ -0.21
VPS52-218ENST00000482399 ARHGEF2Q92974 986 aaKnown RBP13.72□□□□□ -0.21
VPS52-218ENST00000482399 HOMER3Q9NSC5 361 aa13.72□□□□□ -0.21
VPS52-218ENST00000482399 NKIRAS1Q9NYS0 192 aa13.72□□□□□ -0.21
VPS52-218ENST00000482399 ADCY8P40145 1251 aa13.72□□□□□ -0.21
VPS52-218ENST00000482399 LACTBP83111 547 aaPredicted RBP13.72□□□□□ -0.21
VPS52-218ENST00000482399 C10orf76Q5T2E6 689 aa13.72□□□□□ -0.21
VPS52-218ENST00000482399 SCFD2Q8WU76 684 aa13.72□□□□□ -0.21
VPS52-218ENST00000482399 RTFDC1Q9BY42 306 aaPredicted RBP13.72□□□□□ -0.21
VPS52-218ENST00000482399 SIPA1L3O60292 1781 aaPredicted RBP13.71□□□□□ -0.21
VPS52-218ENST00000482399 UBOX5O94941 541 aa13.71□□□□□ -0.21
VPS52-218ENST00000482399 TNFRSF8P28908 595 aa13.71□□□□□ -0.21
VPS52-218ENST00000482399 SOX5P35711 763 aa13.71□□□□□ -0.21
VPS52-218ENST00000482399 PLCB3Q01970 1234 aa13.71□□□□□ -0.21
VPS52-218ENST00000482399 SEMA3FQ13275 785 aa13.71□□□□□ -0.21
VPS52-218ENST00000482399 BARGINQ6ZT62 677 aa13.71□□□□□ -0.21
VPS52-218ENST00000482399 INTS8Q75QN2 995 aaKnown RBP13.71□□□□□ -0.21
VPS52-218ENST00000482399 MREGQ8N565 214 aa13.71□□□□□ -0.21
VPS52-218ENST00000482399 SLC30A5Q8TAD4 765 aa13.71□□□□□ -0.21
VPS52-218ENST00000482399 NGLY1Q96IV0 654 aa13.71□□□□□ -0.21
VPS52-218ENST00000482399 ECT2Q9H8V3 914 aa13.71□□□□□ -0.21
VPS52-218ENST00000482399 POC1B-GALNT4F8VUJ3 575 aa13.71□□□□□ -0.21
VPS52-218ENST00000482399 PPP1R11O60927 126 aaPredicted RBP13.71□□□□□ -0.21
VPS52-218ENST00000482399 EIF3BP55884 814 aaKnown RBP13.71□□□□□ -0.21
VPS52-218ENST00000482399 BYSLQ13895 437 aaKnown RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms