RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 WNT16Q9UBV4 365 aa17.03■□□□□ 0.32
HDAC6-224ENST00000481929 IRAK3Q9Y616 596 aa17.03■□□□□ 0.32
HDAC6-224ENST00000481929 CACNA1GO43497 2377 aa17.03■□□□□ 0.32
HDAC6-224ENST00000481929 FRYLO94915 3013 aa17.02■□□□□ 0.32
HDAC6-224ENST00000481929 IGKV6D-21A0A0A0MT36 114 aa17.02■□□□□ 0.32
HDAC6-224ENST00000481929 NARSO43776 548 aaKnown RBP17.02■□□□□ 0.32
HDAC6-224ENST00000481929 GPR32O75388 356 aa17.02■□□□□ 0.32
HDAC6-224ENST00000481929 CFHP08603 1231 aa17.02■□□□□ 0.32
HDAC6-224ENST00000481929 CTSAP10619 480 aa17.02■□□□□ 0.32
HDAC6-224ENST00000481929 POLGP54098 1239 aaPredicted RBP17.02■□□□□ 0.32
HDAC6-224ENST00000481929 ITGB3BPQ13352 177 aaPredicted RBP17.02■□□□□ 0.32
HDAC6-224ENST00000481929 HDAC1Q13547 482 aaPredicted RBP17.02■□□□□ 0.32
HDAC6-224ENST00000481929 NONOQ15233 471 aaKnown RBP eCLIP17.02■□□□□ 0.32
HDAC6-224ENST00000481929 PDXDC2PQ6P474 469 aa17.02■□□□□ 0.32
HDAC6-224ENST00000481929 PPFIBP1Q86W92 1011 aa17.02■□□□□ 0.32
HDAC6-224ENST00000481929 METTL13Q8N6R0 699 aa17.02■□□□□ 0.32
HDAC6-224ENST00000481929 U3KPZ7 1027 aaPredicted RBP17.02■□□□□ 0.32
HDAC6-224ENST00000481929 GPR179Q6PRD1 2367 aa17.01■□□□□ 0.31
HDAC6-224ENST00000481929 KRBA1A5PL33 1030 aa17.01■□□□□ 0.31
HDAC6-224ENST00000481929 CARNS1A5YM72 827 aa17.01■□□□□ 0.31
HDAC6-224ENST00000481929 ZBTB42B2RXF5 422 aa17.01■□□□□ 0.31
HDAC6-224ENST00000481929 DDAH1O94760 285 aa17.01■□□□□ 0.31
HDAC6-224ENST00000481929 C22orf31O95567 290 aa17.01■□□□□ 0.31
HDAC6-224ENST00000481929 GNAQP50148 359 aa17.01■□□□□ 0.31
HDAC6-224ENST00000481929 TBC1D8BQ0IIM8 1120 aa17.01■□□□□ 0.31
HDAC6-224ENST00000481929 RSPO4Q2I0M5 234 aaPredicted RBP17.01■□□□□ 0.31
HDAC6-224ENST00000481929 CCDC60Q8IWA6 550 aaPredicted RBP17.01■□□□□ 0.31
HDAC6-224ENST00000481929 ZNF654Q8IZM8 581 aa17.01■□□□□ 0.31
HDAC6-224ENST00000481929 DCLK2Q8N568 766 aa17.01■□□□□ 0.31
HDAC6-224ENST00000481929 NCOA7Q8NI08 942 aa17.01■□□□□ 0.31
HDAC6-224ENST00000481929 FEZF2Q8TBJ5 459 aa17.01■□□□□ 0.31
HDAC6-224ENST00000481929 MYL10Q9BUA6 226 aa17.01■□□□□ 0.31
HDAC6-224ENST00000481929 TBC1D17Q9HA65 648 aa17.01■□□□□ 0.31
HDAC6-224ENST00000481929 AGO4Q9HCK5 861 aaKnown RBP17.01■□□□□ 0.31
HDAC6-224ENST00000481929 ZNF302Q9NR11 478 aa17.01■□□□□ 0.31
HDAC6-224ENST00000481929 DDX39AO00148 427 aaKnown RBP17■□□□□ 0.31
HDAC6-224ENST00000481929 ZC3H11AO75152 810 aaKnown RBP eCLIP17■□□□□ 0.31
HDAC6-224ENST00000481929 PLEKHA8P1O95397 391 aa17■□□□□ 0.31
HDAC6-224ENST00000481929 SP9P0CG40 484 aa17■□□□□ 0.31
HDAC6-224ENST00000481929 LETM2Q2VYF4 491 aa17■□□□□ 0.31
HDAC6-224ENST00000481929 CEP55Q53EZ4 464 aa17■□□□□ 0.31
HDAC6-224ENST00000481929 SPECC1Q5M775 1068 aa17■□□□□ 0.31
HDAC6-224ENST00000481929 ABHD15Q6UXT9 468 aa17■□□□□ 0.31
HDAC6-224ENST00000481929 DDX53Q86TM3 631 aaKnown RBP17■□□□□ 0.31
HDAC6-224ENST00000481929 PLEKHM2Q8IWE5 1019 aa17■□□□□ 0.31
HDAC6-224ENST00000481929 CKAP2LQ8IYA6 745 aa17■□□□□ 0.31
HDAC6-224ENST00000481929 OSBPL3Q9H4L5 887 aa17■□□□□ 0.31
HDAC6-224ENST00000481929 CA14Q9ULX7 337 aa17■□□□□ 0.31
HDAC6-224ENST00000481929 AKT3Q9Y243 479 aa17■□□□□ 0.31
HDAC6-224ENST00000481929 A0A0U1RQF3 1178 aa16.99■□□□□ 0.31
HDAC6-224ENST00000481929 CCNE2O96020 404 aa16.99■□□□□ 0.31
HDAC6-224ENST00000481929 CYP21A2P08686 494 aa16.99■□□□□ 0.31
HDAC6-224ENST00000481929 NLRP11P59045 1033 aaKnown RBP16.99■□□□□ 0.31
HDAC6-224ENST00000481929 MIS18BP1Q6P0N0 1132 aa16.99■□□□□ 0.31
HDAC6-224ENST00000481929 C15orf39Q6ZRI6 1047 aa16.99■□□□□ 0.31
HDAC6-224ENST00000481929 ZNF598Q86UK7 904 aaKnown RBP16.99■□□□□ 0.31
HDAC6-224ENST00000481929 TMEM173Q86WV6 379 aaPredicted RBP16.99■□□□□ 0.31
HDAC6-224ENST00000481929 SRBD1Q8N5C6 995 aaKnown RBP16.99■□□□□ 0.31
HDAC6-224ENST00000481929 IGDCC4Q8TDY8 1250 aa16.99■□□□□ 0.31
HDAC6-224ENST00000481929 MAP7D2Q96T17 732 aa16.99■□□□□ 0.31
HDAC6-224ENST00000481929 IL25Q9H293 177 aa16.99■□□□□ 0.31
HDAC6-224ENST00000481929 E7EWF7 191 aa16.98■□□□□ 0.31
HDAC6-224ENST00000481929 DCNP07585 359 aaKnown RBP16.98■□□□□ 0.31
HDAC6-224ENST00000481929 SDHBP21912 280 aa16.98■□□□□ 0.31
HDAC6-224ENST00000481929 EIF4BP23588 611 aaKnown RBP16.98■□□□□ 0.31
HDAC6-224ENST00000481929 GBP2P32456 591 aaPredicted RBP16.98■□□□□ 0.31
HDAC6-224ENST00000481929 CLCN3P51790 818 aa16.98■□□□□ 0.31
HDAC6-224ENST00000481929 ANTXR2P58335 489 aa16.98■□□□□ 0.31
HDAC6-224ENST00000481929 SWSAP1Q6NVH7 229 aa16.98■□□□□ 0.31
HDAC6-224ENST00000481929 C1orf210Q8IVY1 113 aa16.98■□□□□ 0.31
HDAC6-224ENST00000481929 RSAD2Q8WXG1 361 aa16.98■□□□□ 0.31
HDAC6-224ENST00000481929 BBXQ8WY36 941 aaPredicted RBP16.98■□□□□ 0.31
HDAC6-224ENST00000481929 RSPH1Q8WYR4 309 aa16.98■□□□□ 0.31
HDAC6-224ENST00000481929 IGSF21Q96ID5 467 aa16.98■□□□□ 0.31
HDAC6-224ENST00000481929 EMILIN2Q9BXX0 1053 aa16.98■□□□□ 0.31
HDAC6-224ENST00000481929 DACT1Q9NYF0 836 aa16.98■□□□□ 0.31
HDAC6-224ENST00000481929 FANCMQ8IYD8 2048 aa16.97■□□□□ 0.31
HDAC6-224ENST00000481929 hCG_1642624A0A1W2PR95 340 aa16.97■□□□□ 0.31
HDAC6-224ENST00000481929 KINO60870 393 aaKnown RBP16.97■□□□□ 0.31
HDAC6-224ENST00000481929 SRFP11831 508 aa16.97■□□□□ 0.31
HDAC6-224ENST00000481929 ATP4AP20648 1035 aa16.97■□□□□ 0.31
HDAC6-224ENST00000481929 KLRC2P26717 231 aa16.97■□□□□ 0.31
HDAC6-224ENST00000481929 PTPN14Q15678 1187 aa16.97■□□□□ 0.31
HDAC6-224ENST00000481929 PHLDB3Q6NSJ2 640 aa16.97■□□□□ 0.31
HDAC6-224ENST00000481929 HEATR3Q7Z4Q2 680 aa16.97■□□□□ 0.31
HDAC6-224ENST00000481929 CMTR1Q8N1G2 835 aaKnown RBP16.97■□□□□ 0.31
HDAC6-224ENST00000481929 ZNF710Q8N1W2 664 aa16.97■□□□□ 0.31
HDAC6-224ENST00000481929 STAMQ92783 540 aa16.97■□□□□ 0.31
HDAC6-224ENST00000481929 ADAMTS10Q9H324 1103 aa16.97■□□□□ 0.31
HDAC6-224ENST00000481929 LY9Q9HBG7 655 aa16.97■□□□□ 0.31
HDAC6-224ENST00000481929 CEP131Q9UPN4 1083 aa16.97■□□□□ 0.31
HDAC6-224ENST00000481929 SIT1Q9Y3P8 196 aa16.97■□□□□ 0.31
HDAC6-224ENST00000481929 C2orf16Q68DN1 1984 aa16.97■□□□□ 0.31
HDAC6-224ENST00000481929 MEIS1O00470 390 aa16.96■□□□□ 0.31
HDAC6-224ENST00000481929 MAGEB2O15479 319 aa16.96■□□□□ 0.31
HDAC6-224ENST00000481929 N4BP1O75113 896 aaKnown RBP16.96■□□□□ 0.31
HDAC6-224ENST00000481929 TMOD1P28289 359 aa16.96■□□□□ 0.31
HDAC6-224ENST00000481929 CLCN4P51793 760 aa16.96■□□□□ 0.31
HDAC6-224ENST00000481929 B4GALNT3Q6L9W6 998 aa16.96■□□□□ 0.31
HDAC6-224ENST00000481929 TRMT1LQ7Z2T5 733 aaKnown RBP16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms