RNA–Protein interactions for RNA: ENST00000480638.1

CALD1-219, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 560 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-219ENST00000480638 MTG2Q9H4K7 406 aa7.27□□□□□ -1.25
CALD1-219ENST00000480638 SAE1Q9UBE0 346 aaPredicted RBP7.27□□□□□ -1.25
CALD1-219ENST00000480638 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.26□□□□□ -1.25
CALD1-219ENST00000480638 OPHN1O60890 802 aa7.26□□□□□ -1.25
CALD1-219ENST00000480638 RAB11FIP3O75154 756 aa7.26□□□□□ -1.25
CALD1-219ENST00000480638 MRE11P49959 708 aa7.26□□□□□ -1.25
CALD1-219ENST00000480638 SESN3P58005 492 aa7.26□□□□□ -1.25
CALD1-219ENST00000480638 ANTXR2P58335 489 aa7.26□□□□□ -1.25
CALD1-219ENST00000480638 TMPRSS15P98073 1019 aa7.26□□□□□ -1.25
CALD1-219ENST00000480638 AGBL4Q5VU57 503 aa7.26□□□□□ -1.25
CALD1-219ENST00000480638 LHFPL2Q6ZUX7 228 aa7.26□□□□□ -1.25
CALD1-219ENST00000480638 RASSF3Q86WH2 238 aa7.26□□□□□ -1.25
CALD1-219ENST00000480638 CXorf67Q86X51 503 aaPredicted RBP7.26□□□□□ -1.25
CALD1-219ENST00000480638 FERMT2Q96AC1 680 aa7.26□□□□□ -1.25
CALD1-219ENST00000480638 BDH2Q9BUT1 245 aa7.26□□□□□ -1.25
CALD1-219ENST00000480638 MEGF9Q9H1U4 602 aa7.26□□□□□ -1.25
CALD1-219ENST00000480638 POLR3BQ9NW08 1133 aaPredicted RBP7.26□□□□□ -1.25
CALD1-219ENST00000480638 DENND2AQ9ULE3 1009 aa7.26□□□□□ -1.25
CALD1-219ENST00000480638 PPP2R3BQ9Y5P8 575 aa7.26□□□□□ -1.25
CALD1-219ENST00000480638 ST20-MTHFSA0A0A6YYL1 179 aa7.25□□□□□ -1.25
CALD1-219ENST00000480638 TBR1Q16650 682 aa7.25□□□□□ -1.25
CALD1-219ENST00000480638 RNF151Q2KHN1 245 aa7.25□□□□□ -1.25
CALD1-219ENST00000480638 RELTQ969Z4 430 aa7.25□□□□□ -1.25
CALD1-219ENST00000480638 DYDC2Q96IM9 177 aa7.25□□□□□ -1.25
CALD1-219ENST00000480638 VWA7Q9Y334 891 aa7.25□□□□□ -1.25
CALD1-219ENST00000480638 NOC2LQ9Y3T9 749 aaKnown RBP7.25□□□□□ -1.25
CALD1-219ENST00000480638 ZNF536O15090 1300 aa7.25□□□□□ -1.25
CALD1-219ENST00000480638 A0A0A6YYJ9 748 aa7.24□□□□□ -1.25
CALD1-219ENST00000480638 GPR39O43194 453 aa7.24□□□□□ -1.25
CALD1-219ENST00000480638 MANFP55145 182 aaKnown RBP7.24□□□□□ -1.25
CALD1-219ENST00000480638 NFYCQ13952 458 aa7.24□□□□□ -1.25
CALD1-219ENST00000480638 KLHDC10Q6PID8 442 aa7.24□□□□□ -1.25
CALD1-219ENST00000480638 USP30Q70CQ3 517 aa7.24□□□□□ -1.25
CALD1-219ENST00000480638 WDR66Q8TBY9 1149 aa7.24□□□□□ -1.25
CALD1-219ENST00000480638 NKD2Q969F2 451 aaPredicted RBP7.24□□□□□ -1.25
CALD1-219ENST00000480638 OR10A2Q9H208 303 aa7.24□□□□□ -1.25
CALD1-219ENST00000480638 JADE2Q9NQC1 790 aa7.24□□□□□ -1.25
CALD1-219ENST00000480638 PPP4R1LQ9P1A2 415 aa7.24□□□□□ -1.25
CALD1-219ENST00000480638 MYPNQ86TC9 1320 aa7.24□□□□□ -1.25
CALD1-219ENST00000480638 PRSS38A1L453 326 aa7.23□□□□□ -1.25
CALD1-219ENST00000480638 MAFGO15525 162 aa7.23□□□□□ -1.25
CALD1-219ENST00000480638 ARHGAP6O43182 974 aa7.23□□□□□ -1.25
CALD1-219ENST00000480638 FOXD2O60548 495 aaPredicted RBP7.23□□□□□ -1.25
CALD1-219ENST00000480638 PCDH8O95206 1070 aa7.23□□□□□ -1.25
CALD1-219ENST00000480638 PFKMP08237 780 aa7.23□□□□□ -1.25
CALD1-219ENST00000480638 ADAM15Q13444 863 aa7.23□□□□□ -1.25
CALD1-219ENST00000480638 SLFN13Q68D06 897 aa7.23□□□□□ -1.25
CALD1-219ENST00000480638 SPATS2Q86XZ4 545 aaKnown RBP7.23□□□□□ -1.25
CALD1-219ENST00000480638 ATL2Q8NHH9 583 aa7.23□□□□□ -1.25
CALD1-219ENST00000480638 RBM15Q96T37 977 aaKnown RBP eCLIP7.23□□□□□ -1.25
CALD1-219ENST00000480638 PTPN18Q99952 460 aa7.23□□□□□ -1.25
CALD1-219ENST00000480638 NOL10Q9BSC4 688 aaKnown RBP7.23□□□□□ -1.25
CALD1-219ENST00000480638 SEC61A2Q9H9S3 476 aa7.23□□□□□ -1.25
CALD1-219ENST00000480638 TOPORSQ9NS56 1045 aaPredicted RBP7.23□□□□□ -1.25
CALD1-219ENST00000480638 MCM8Q9UJA3 840 aa7.23□□□□□ -1.25
CALD1-219ENST00000480638 FAM184BQ9ULE4 1060 aa7.23□□□□□ -1.25
CALD1-219ENST00000480638 NR2E1Q9Y466 385 aa7.23□□□□□ -1.25
CALD1-219ENST00000480638 ITGB3P05106 788 aa7.22□□□□□ -1.25
CALD1-219ENST00000480638 CLEC2LP0C7M8 214 aa7.22□□□□□ -1.25
CALD1-219ENST00000480638 SYN1P17600 705 aa7.22□□□□□ -1.25
CALD1-219ENST00000480638 SESN2P58004 480 aaPredicted RBP7.22□□□□□ -1.25
CALD1-219ENST00000480638 PDCD1Q15116 288 aa7.22□□□□□ -1.25
CALD1-219ENST00000480638 ERICH6BQ5W0A0 696 aa7.22□□□□□ -1.25
CALD1-219ENST00000480638 RNF219Q5W0B1 726 aaPredicted RBP7.22□□□□□ -1.25
CALD1-219ENST00000480638 IQSEC1Q6DN90 963 aa7.22□□□□□ -1.25
CALD1-219ENST00000480638 NEIL1Q96FI4 390 aaPredicted RBP7.22□□□□□ -1.25
CALD1-219ENST00000480638 LMF1Q96S06 567 aa7.22□□□□□ -1.25
CALD1-219ENST00000480638 SSBP3Q9BWW4 388 aaPredicted RBP7.22□□□□□ -1.25
CALD1-219ENST00000480638 ANO3Q9BYT9 981 aa7.22□□□□□ -1.25
CALD1-219ENST00000480638 DNAI1Q9UI46 699 aa7.22□□□□□ -1.25
CALD1-219ENST00000480638 CTDP1Q9Y5B0 961 aaPredicted RBP7.22□□□□□ -1.25
CALD1-219ENST00000480638 PCDHB6Q9Y5E3 794 aa7.22□□□□□ -1.25
CALD1-219ENST00000480638 NPEPPSL1A6NEC2 478 aa7.21□□□□□ -1.26
CALD1-219ENST00000480638 MATN2O00339 956 aa7.21□□□□□ -1.26
CALD1-219ENST00000480638 H2AFYO75367 372 aaKnown RBP7.21□□□□□ -1.26
CALD1-219ENST00000480638 RAC3P60763 192 aa7.21□□□□□ -1.26
CALD1-219ENST00000480638 LIMS2Q7Z4I7 341 aa7.21□□□□□ -1.26
CALD1-219ENST00000480638 DDX42Q86XP3 938 aaKnown RBP eCLIP7.21□□□□□ -1.26
CALD1-219ENST00000480638 CDYL2Q8N8U2 506 aa7.21□□□□□ -1.26
CALD1-219ENST00000480638 OR14K1Q8NGZ2 314 aa7.21□□□□□ -1.26
CALD1-219ENST00000480638 CFHR4Q92496 578 aa7.21□□□□□ -1.26
CALD1-219ENST00000480638 GFM2Q969S9 779 aaKnown RBP7.21□□□□□ -1.26
CALD1-219ENST00000480638 HIST1H2AHQ96KK5 128 aa7.21□□□□□ -1.26
CALD1-219ENST00000480638 WDR92Q96MX6 357 aa7.21□□□□□ -1.26
CALD1-219ENST00000480638 LRRC37BQ96QE4 947 aa7.21□□□□□ -1.26
CALD1-219ENST00000480638 HIST1H2AJQ99878 128 aa7.21□□□□□ -1.26
CALD1-219ENST00000480638 WNT8AQ9H1J5 351 aa7.21□□□□□ -1.26
CALD1-219ENST00000480638 VTA1Q9NP79 307 aa7.21□□□□□ -1.26
CALD1-219ENST00000480638 SYNPO2Q9UMS6 1093 aa7.21□□□□□ -1.26
CALD1-219ENST00000480638 OAZ3Q9UMX2 235 aa7.21□□□□□ -1.26
CALD1-219ENST00000480638 ATP8A1Q9Y2Q0 1164 aa7.21□□□□□ -1.26
CALD1-219ENST00000480638 A0A0A6YYK5 440 aaPredicted RBP7.2□□□□□ -1.26
CALD1-219ENST00000480638 KRTAP9-7A8MTY7 169 aa7.2□□□□□ -1.26
CALD1-219ENST00000480638 PRKD3O94806 890 aa7.2□□□□□ -1.26
CALD1-219ENST00000480638 CELA3BP08861 270 aa7.2□□□□□ -1.26
CALD1-219ENST00000480638 AMPD3Q01432 767 aa7.2□□□□□ -1.26
CALD1-219ENST00000480638 HGFACQ04756 655 aa7.2□□□□□ -1.26
CALD1-219ENST00000480638 PLP2Q04941 152 aa7.2□□□□□ -1.26
CALD1-219ENST00000480638 CCDC62Q6P9F0 684 aa7.2□□□□□ -1.26
CALD1-219ENST00000480638 GLB1LQ6UWU2 654 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms