RNA–Protein interactions for RNA: ENST00000480484.5

COMMD4-203, Transcript of COMM domain containing 4, humanhuman

TSL 1 (best)

Gene COMMD4, Length 3,225 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-203ENST00000480484 SMIM23A6NLE4 172 aa11□□□□□ -0.65
COMMD4-203ENST00000480484 TRIM37O94972 964 aa11□□□□□ -0.65
COMMD4-203ENST00000480484 SCG2P13521 617 aa11□□□□□ -0.65
COMMD4-203ENST00000480484 KLRC1P26715 233 aa11□□□□□ -0.65
COMMD4-203ENST00000480484 IRX1P78414 480 aaPredicted RBP11□□□□□ -0.65
COMMD4-203ENST00000480484 ZKSCAN8Q15776 578 aaPredicted RBP11□□□□□ -0.65
COMMD4-203ENST00000480484 CCDC174Q6PII3 467 aa11□□□□□ -0.65
COMMD4-203ENST00000480484 FAM196AQ6ZSG2 479 aa11□□□□□ -0.65
COMMD4-203ENST00000480484 KCNK18Q7Z418 384 aa11□□□□□ -0.65
COMMD4-203ENST00000480484 RNF217Q8TC41 542 aa11□□□□□ -0.65
COMMD4-203ENST00000480484 TGFBRAP1Q8WUH2 860 aa11□□□□□ -0.65
COMMD4-203ENST00000480484 CCT6BQ92526 530 aa11□□□□□ -0.65
COMMD4-203ENST00000480484 TATDN2Q93075 761 aa11□□□□□ -0.65
COMMD4-203ENST00000480484 SELENOSQ9BQE4 189 aa11□□□□□ -0.65
COMMD4-203ENST00000480484 TRIM31Q9BZY9 425 aa11□□□□□ -0.65
COMMD4-203ENST00000480484 NEUROG2Q9H2A3 272 aa11□□□□□ -0.65
COMMD4-203ENST00000480484 CDHR5Q9HBB8 845 aa11□□□□□ -0.65
COMMD4-203ENST00000480484 RNF14Q9UBS8 474 aa11□□□□□ -0.65
COMMD4-203ENST00000480484 GGT7Q9UJ14 662 aa11□□□□□ -0.65
COMMD4-203ENST00000480484 SLC26A4O43511 780 aa11□□□□□ -0.65
COMMD4-203ENST00000480484 ANP32DO95626 131 aa11□□□□□ -0.65
COMMD4-203ENST00000480484 LETM2Q2VYF4 491 aa11□□□□□ -0.65
COMMD4-203ENST00000480484 FIGNQ5HY92 759 aa11□□□□□ -0.65
COMMD4-203ENST00000480484 RC3H1Q5TC82 1133 aaKnown RBP11□□□□□ -0.65
COMMD4-203ENST00000480484 MAPKAPK5Q8IW41 473 aa11□□□□□ -0.65
COMMD4-203ENST00000480484 CCDC197Q8NCU1 140 aa11□□□□□ -0.65
COMMD4-203ENST00000480484 ARMC2Q8NEN0 867 aa11□□□□□ -0.65
COMMD4-203ENST00000480484 MAGEC3Q8TD91 643 aa11□□□□□ -0.65
COMMD4-203ENST00000480484 DDX47Q9H0S4 455 aaKnown RBP11□□□□□ -0.65
COMMD4-203ENST00000480484 ATP8A2Q9NTI2 1148 aa11□□□□□ -0.65
COMMD4-203ENST00000480484 BCS1LQ9Y276 419 aa11□□□□□ -0.65
COMMD4-203ENST00000480484 EME2A4GXA9 379 aaPredicted RBP10.99□□□□□ -0.65
COMMD4-203ENST00000480484 RFC4P35249 363 aa10.99□□□□□ -0.65
COMMD4-203ENST00000480484 KIAA0753Q2KHM9 967 aa10.99□□□□□ -0.65
COMMD4-203ENST00000480484 USP38Q8NB14 1042 aa10.99□□□□□ -0.65
COMMD4-203ENST00000480484 LMBR1Q8WVP7 490 aa10.99□□□□□ -0.65
COMMD4-203ENST00000480484 DPH5Q9H2P9 285 aa10.99□□□□□ -0.65
COMMD4-203ENST00000480484 LRRC4BQ9NT99 713 aa10.99□□□□□ -0.65
COMMD4-203ENST00000480484 ARPP21Q9UBL0 812 aaPredicted RBP10.99□□□□□ -0.65
COMMD4-203ENST00000480484 SIK3Q9Y2K2 1263 aa10.99□□□□□ -0.65
COMMD4-203ENST00000480484 LDHBP07195 334 aaKnown RBP10.99□□□□□ -0.65
COMMD4-203ENST00000480484 HNRNPH3P31942 346 aaKnown RBP10.99□□□□□ -0.65
COMMD4-203ENST00000480484 ZNF76P36508 570 aa10.99□□□□□ -0.65
COMMD4-203ENST00000480484 TRAPPC10P48553 1259 aa10.99□□□□□ -0.65
COMMD4-203ENST00000480484 ARHGAP4P98171 946 aa10.99□□□□□ -0.65
COMMD4-203ENST00000480484 BIRC3Q13489 604 aa10.99□□□□□ -0.65
COMMD4-203ENST00000480484 ELOAQ14241 798 aaKnown RBP10.99□□□□□ -0.65
COMMD4-203ENST00000480484 PPP2R5BQ15173 497 aa10.99□□□□□ -0.65
COMMD4-203ENST00000480484 ARL6IP4Q66PJ3 421 aaKnown RBP10.99□□□□□ -0.65
COMMD4-203ENST00000480484 LRIG3Q6UXM1 1119 aa10.99□□□□□ -0.65
COMMD4-203ENST00000480484 ZSCAN29Q8IWY8 852 aaPredicted RBP10.99□□□□□ -0.65
COMMD4-203ENST00000480484 RNF10Q8N5U6 811 aaKnown RBP10.99□□□□□ -0.65
COMMD4-203ENST00000480484 TBC1D5Q92609 795 aa10.99□□□□□ -0.65
COMMD4-203ENST00000480484 CHMP6Q96FZ7 201 aa10.99□□□□□ -0.65
COMMD4-203ENST00000480484 L3MBTL3Q96JM7 780 aaPredicted RBP10.99□□□□□ -0.65
COMMD4-203ENST00000480484 ISCUQ9H1K1 167 aa10.99□□□□□ -0.65
COMMD4-203ENST00000480484 C12orf49Q9H741 205 aa10.99□□□□□ -0.65
COMMD4-203ENST00000480484 PARP2Q9UGN5 583 aa10.99□□□□□ -0.65
COMMD4-203ENST00000480484 USP21Q9UK80 565 aa10.99□□□□□ -0.65
COMMD4-203ENST00000480484 POTEMA6NI47 508 aa10.99□□□□□ -0.65
COMMD4-203ENST00000480484 CCT8L1PA6NM43 557 aa10.99□□□□□ -0.65
COMMD4-203ENST00000480484 SRRM3A6NNA2 597 aaPredicted RBP10.99□□□□□ -0.65
COMMD4-203ENST00000480484 H0YGN5 161 aa10.99□□□□□ -0.65
COMMD4-203ENST00000480484 TBX3O15119 743 aa10.99□□□□□ -0.65
COMMD4-203ENST00000480484 DAPK3O43293 454 aa10.99□□□□□ -0.65
COMMD4-203ENST00000480484 CALM1P0DP23 149 aa10.99□□□□□ -0.65
COMMD4-203ENST00000480484 CALM2P0DP24 149 aa10.99□□□□□ -0.65
COMMD4-203ENST00000480484 CALM3P0DP25 149 aa10.99□□□□□ -0.65
COMMD4-203ENST00000480484 SLC9C1Q4G0N8 1177 aa10.99□□□□□ -0.65
COMMD4-203ENST00000480484 LACTB2Q53H82 288 aaPredicted RBP10.99□□□□□ -0.65
COMMD4-203ENST00000480484 C12orf60Q5U649 245 aa10.99□□□□□ -0.65
COMMD4-203ENST00000480484 SLC30A10Q6XR72 485 aa10.99□□□□□ -0.65
COMMD4-203ENST00000480484 CAPN12Q6ZSI9 719 aa10.99□□□□□ -0.65
COMMD4-203ENST00000480484 CCDC84Q86UT8 332 aaPredicted RBP10.99□□□□□ -0.65
COMMD4-203ENST00000480484 ANKS4BQ8N8V4 417 aa10.99□□□□□ -0.65
COMMD4-203ENST00000480484 SPATS2LQ9NUQ6 558 aaKnown RBP10.99□□□□□ -0.65
COMMD4-203ENST00000480484 KBTBD4Q9NVX7 518 aa10.99□□□□□ -0.65
COMMD4-203ENST00000480484 NFS1Q9Y697 457 aa10.99□□□□□ -0.65
COMMD4-203ENST00000480484 NPHP3-ACAD11A0A0J9YXS1 232 aa10.98□□□□□ -0.65
COMMD4-203ENST00000480484 PJA2O43164 708 aa10.98□□□□□ -0.65
COMMD4-203ENST00000480484 DNAJC8O75937 253 aaPredicted RBP10.98□□□□□ -0.65
COMMD4-203ENST00000480484 TAL1P17542 331 aaPredicted RBP10.98□□□□□ -0.65
COMMD4-203ENST00000480484 DRD4P21917 467 aa10.98□□□□□ -0.65
COMMD4-203ENST00000480484 GPSM2P81274 684 aa10.98□□□□□ -0.65
COMMD4-203ENST00000480484 DHX9Q08211 1270 aaKnown RBP10.98□□□□□ -0.65
COMMD4-203ENST00000480484 PFKFB3Q16875 520 aaPredicted RBP10.98□□□□□ -0.65
COMMD4-203ENST00000480484 PDXDC1Q6P996 788 aa10.98□□□□□ -0.65
COMMD4-203ENST00000480484 POTEAQ6S8J7 498 aa10.98□□□□□ -0.65
COMMD4-203ENST00000480484 BLIDQ8IZY5 108 aa10.98□□□□□ -0.65
COMMD4-203ENST00000480484 PNMA1Q8ND90 353 aa10.98□□□□□ -0.65
COMMD4-203ENST00000480484 HOOK2Q96ED9 719 aa10.98□□□□□ -0.65
COMMD4-203ENST00000480484 INPP4AQ96PE3 977 aaPredicted RBP10.98□□□□□ -0.65
COMMD4-203ENST00000480484 TRIM9Q9C026 710 aa10.98□□□□□ -0.65
COMMD4-203ENST00000480484 ADAMTS1Q9UHI8 967 aa10.98□□□□□ -0.65
COMMD4-203ENST00000480484 PCDHA6Q9UN73 950 aa10.98□□□□□ -0.65
COMMD4-203ENST00000480484 PCDHA8Q9Y5H6 950 aa10.98□□□□□ -0.65
COMMD4-203ENST00000480484 F8W031 263 aaPredicted RBP10.98□□□□□ -0.65
COMMD4-203ENST00000480484 DIAPH2O60879 1101 aa10.98□□□□□ -0.65
COMMD4-203ENST00000480484 LCA5LO95447 670 aa10.98□□□□□ -0.65
COMMD4-203ENST00000480484 SLC8A3P57103 927 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms