RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 ADAMTS2O95450 1211 aa6.56□□□□□ -1.36
PRPF4B-205ENST00000480058 S100BP04271 92 aaPredicted RBP6.56□□□□□ -1.36
PRPF4B-205ENST00000480058 INPP1P49441 399 aa6.56□□□□□ -1.36
PRPF4B-205ENST00000480058 PDE1CQ14123 709 aaPredicted RBP6.56□□□□□ -1.36
PRPF4B-205ENST00000480058 ARL13BQ3SXY8 428 aa6.56□□□□□ -1.36
PRPF4B-205ENST00000480058 CCDC92Q53HC0 331 aaPredicted RBP6.56□□□□□ -1.36
PRPF4B-205ENST00000480058 PAPD7Q5XG87 772 aaKnown RBP6.56□□□□□ -1.36
PRPF4B-205ENST00000480058 CDKL3Q8IVW4 592 aaPredicted RBP6.56□□□□□ -1.36
PRPF4B-205ENST00000480058 GIMAP8Q8ND71 665 aaPredicted RBP6.56□□□□□ -1.36
PRPF4B-205ENST00000480058 DCAF4Q8WV16 495 aa6.56□□□□□ -1.36
PRPF4B-205ENST00000480058 ANKRD36BP1Q96IX9 119 aa6.56□□□□□ -1.36
PRPF4B-205ENST00000480058 NBPF3Q9H094 633 aa6.56□□□□□ -1.36
PRPF4B-205ENST00000480058 TBC1D23Q9NUY8 699 aa6.56□□□□□ -1.36
PRPF4B-205ENST00000480058 ASNSD1Q9NWL6 643 aa6.56□□□□□ -1.36
PRPF4B-205ENST00000480058 SUCLA2Q9P2R7 463 aaPredicted RBP6.56□□□□□ -1.36
PRPF4B-205ENST00000480058 GDAQ9Y2T3 454 aa6.56□□□□□ -1.36
PRPF4B-205ENST00000480058 HEG1Q9ULI3 1381 aa6.56□□□□□ -1.36
PRPF4B-205ENST00000480058 E9PMD0 336 aa6.56□□□□□ -1.36
PRPF4B-205ENST00000480058 ECE1P42892 770 aa6.56□□□□□ -1.36
PRPF4B-205ENST00000480058 KRR1Q13601 381 aaKnown RBP6.56□□□□□ -1.36
PRPF4B-205ENST00000480058 LAMB3Q13751 1172 aa6.56□□□□□ -1.36
PRPF4B-205ENST00000480058 ITPRIPL1Q6GPH6 555 aa6.56□□□□□ -1.36
PRPF4B-205ENST00000480058 RPS6KC1Q96S38 1066 aa6.56□□□□□ -1.36
PRPF4B-205ENST00000480058 SLC12A6Q9UHW9 1150 aa6.56□□□□□ -1.36
PRPF4B-205ENST00000480058 FAM47DPA6NHR8 397 aa6.56□□□□□ -1.36
PRPF4B-205ENST00000480058 ZMYND10O75800 440 aa6.56□□□□□ -1.36
PRPF4B-205ENST00000480058 HSPA4LO95757 839 aa6.56□□□□□ -1.36
PRPF4B-205ENST00000480058 KRT19P08727 400 aa6.56□□□□□ -1.36
PRPF4B-205ENST00000480058 PAMP19021 973 aa6.56□□□□□ -1.36
PRPF4B-205ENST00000480058 MUTP22033 750 aa6.56□□□□□ -1.36
PRPF4B-205ENST00000480058 NEK2P51955 445 aa6.56□□□□□ -1.36
PRPF4B-205ENST00000480058 HSPA2P54652 639 aa6.56□□□□□ -1.36
PRPF4B-205ENST00000480058 BASP1P80723 227 aaKnown RBP6.56□□□□□ -1.36
PRPF4B-205ENST00000480058 C1orf146Q5VVC0 180 aa6.56□□□□□ -1.36
PRPF4B-205ENST00000480058 TRPM8Q7Z2W7 1104 aa6.56□□□□□ -1.36
PRPF4B-205ENST00000480058 DNAJC9Q8WXX5 260 aa6.56□□□□□ -1.36
PRPF4B-205ENST00000480058 SERPINB12Q96P63 405 aa6.56□□□□□ -1.36
PRPF4B-205ENST00000480058 INO80BQ9C086 356 aaPredicted RBP6.56□□□□□ -1.36
PRPF4B-205ENST00000480058 VPS33BQ9H267 617 aa6.56□□□□□ -1.36
PRPF4B-205ENST00000480058 PABPC3Q9H361 631 aaKnown RBP6.56□□□□□ -1.36
PRPF4B-205ENST00000480058 EHD2Q9NZN4 543 aa6.56□□□□□ -1.36
PRPF4B-205ENST00000480058 STAP1Q9ULZ2 295 aa6.56□□□□□ -1.36
PRPF4B-205ENST00000480058 KDM5CP41229 1560 aa6.56□□□□□ -1.36
PRPF4B-205ENST00000480058 GOLGA8TH3BQL2 631 aa6.56□□□□□ -1.36
PRPF4B-205ENST00000480058 GOLGA8HP0CJ92 632 aa6.56□□□□□ -1.36
PRPF4B-205ENST00000480058 MCF2P10911 925 aa6.56□□□□□ -1.36
PRPF4B-205ENST00000480058 MECOMQ03112 1051 aa6.56□□□□□ -1.36
PRPF4B-205ENST00000480058 ITIH4Q14624 930 aa6.56□□□□□ -1.36
PRPF4B-205ENST00000480058 NAB2Q15742 525 aa6.56□□□□□ -1.36
PRPF4B-205ENST00000480058 ABCB5Q2M3G0 1257 aa6.56□□□□□ -1.36
PRPF4B-205ENST00000480058 SWT1Q5T5J6 900 aaKnown RBP6.56□□□□□ -1.36
PRPF4B-205ENST00000480058 DAB2IPQ5VWQ8 1189 aa6.56□□□□□ -1.36
PRPF4B-205ENST00000480058 TMEM179Q6ZVK1 233 aa6.56□□□□□ -1.36
PRPF4B-205ENST00000480058 NLRP10Q86W26 655 aa6.56□□□□□ -1.36
PRPF4B-205ENST00000480058 ERICH1Q86X53 443 aa6.56□□□□□ -1.36
PRPF4B-205ENST00000480058 RFX6Q8HWS3 928 aa6.56□□□□□ -1.36
PRPF4B-205ENST00000480058 ICA1LQ8NDH6 482 aa6.56□□□□□ -1.36
PRPF4B-205ENST00000480058 ZNF473Q8WTR7 871 aaKnown RBP6.56□□□□□ -1.36
PRPF4B-205ENST00000480058 SCYL1Q96KG9 808 aa6.56□□□□□ -1.36
PRPF4B-205ENST00000480058 RNPC3Q96LT9 517 aaKnown RBP6.56□□□□□ -1.36
PRPF4B-205ENST00000480058 PLA2G12BQ9BX93 195 aa6.56□□□□□ -1.36
PRPF4B-205ENST00000480058 STK33Q9BYT3 514 aa6.56□□□□□ -1.36
PRPF4B-205ENST00000480058 PHACTR1Q9C0D0 580 aa6.56□□□□□ -1.36
PRPF4B-205ENST00000480058 DDX47Q9H0S4 455 aaKnown RBP6.56□□□□□ -1.36
PRPF4B-205ENST00000480058 BHMT2Q9H2M3 363 aa6.56□□□□□ -1.36
PRPF4B-205ENST00000480058 DCLRE1BQ9H816 532 aa6.56□□□□□ -1.36
PRPF4B-205ENST00000480058 SPC25Q9HBM1 224 aa6.56□□□□□ -1.36
PRPF4B-205ENST00000480058 KMT5AQ9NQR1 393 aa6.56□□□□□ -1.36
PRPF4B-205ENST00000480058 PI4KBQ9UBF8 816 aa6.56□□□□□ -1.36
PRPF4B-205ENST00000480058 IP6K2Q9UHH9 426 aa6.56□□□□□ -1.36
PRPF4B-205ENST00000480058 GTF3C4Q9UKN8 822 aa6.56□□□□□ -1.36
PRPF4B-205ENST00000480058 PDS5AQ29RF7 1337 aaKnown RBP6.56□□□□□ -1.36
PRPF4B-205ENST00000480058 MYCLP12524 364 aaPredicted RBP6.55□□□□□ -1.36
PRPF4B-205ENST00000480058 BTDP43251 543 aa6.55□□□□□ -1.36
PRPF4B-205ENST00000480058 STAT2P52630 851 aa6.55□□□□□ -1.36
PRPF4B-205ENST00000480058 RAD23BP54727 409 aa6.55□□□□□ -1.36
PRPF4B-205ENST00000480058 TRIM56Q9BRZ2 755 aaKnown RBP6.55□□□□□ -1.36
PRPF4B-205ENST00000480058 ERP44Q9BS26 406 aa6.55□□□□□ -1.36
PRPF4B-205ENST00000480058 CCDC28BQ9BUN5 200 aa6.55□□□□□ -1.36
PRPF4B-205ENST00000480058 FTOQ9C0B1 505 aaKnown RBP eCLIP6.55□□□□□ -1.367e-6■■□□□ 12.9
PRPF4B-205ENST00000480058 SAYSD1Q9NPB0 183 aa6.55□□□□□ -1.36
PRPF4B-205ENST00000480058 TMEM51Q9NW97 253 aa6.55□□□□□ -1.36
PRPF4B-205ENST00000480058 PCDHB4Q9Y5E5 795 aa6.55□□□□□ -1.36
PRPF4B-205ENST00000480058 RNF103-CHMP3A0A140T963 221 aa6.55□□□□□ -1.36
PRPF4B-205ENST00000480058 MTSS1O43312 755 aa6.55□□□□□ -1.36
PRPF4B-205ENST00000480058 DLATP10515 647 aaKnown RBP6.55□□□□□ -1.36
PRPF4B-205ENST00000480058 HIC1Q14526 733 aa6.55□□□□□ -1.36
PRPF4B-205ENST00000480058 PTGISQ16647 500 aa6.55□□□□□ -1.36
PRPF4B-205ENST00000480058 ZNF667Q5HYK9 610 aa6.55□□□□□ -1.36
PRPF4B-205ENST00000480058 SHC4Q6S5L8 630 aa6.55□□□□□ -1.36
PRPF4B-205ENST00000480058 ZNF677Q86XU0 584 aa6.55□□□□□ -1.36
PRPF4B-205ENST00000480058 DNAAF3Q8N9W5 541 aa6.55□□□□□ -1.36
PRPF4B-205ENST00000480058 TGS1Q96RS0 853 aaKnown RBP6.55□□□□□ -1.36
PRPF4B-205ENST00000480058 GCC2Q8IWJ2 1684 aa6.55□□□□□ -1.36
PRPF4B-205ENST00000480058 H0Y626 953 aa6.55□□□□□ -1.36
PRPF4B-205ENST00000480058 TLR3O15455 904 aaKnown RBP6.55□□□□□ -1.36
PRPF4B-205ENST00000480058 ARHGEF9O43307 516 aa6.55□□□□□ -1.36
PRPF4B-205ENST00000480058 TRIM16O95361 564 aa6.55□□□□□ -1.36
PRPF4B-205ENST00000480058 IL10P22301 178 aa6.55□□□□□ -1.36
PRPF4B-205ENST00000480058 PRCPP42785 496 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms