RNA–Protein interactions for RNA: ENST00000480055.5

SMURF1-204, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene SMURF1, Length 1,012 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-204ENST00000480055 PCDHB12Q9Y5F1 795 aa11.78□□□□□ -0.52
SMURF1-204ENST00000480055 PCDHA2Q9Y5H9 948 aa11.78□□□□□ -0.52
SMURF1-204ENST00000480055 TBKBP1A7MCY6 615 aa11.77□□□□□ -0.53
SMURF1-204ENST00000480055 DDX11L8A8MPP1 907 aa11.77□□□□□ -0.53
SMURF1-204ENST00000480055 SH2B2O14492 632 aaPredicted RBP11.77□□□□□ -0.53
SMURF1-204ENST00000480055 BACH1O14867 736 aa11.77□□□□□ -0.53
SMURF1-204ENST00000480055 ZNF76P36508 570 aa11.77□□□□□ -0.53
SMURF1-204ENST00000480055 NAPAP54920 295 aa11.77□□□□□ -0.53
SMURF1-204ENST00000480055 ACTR2P61160 394 aa11.77□□□□□ -0.53
SMURF1-204ENST00000480055 MTHFD1LQ6UB35 978 aa11.77□□□□□ -0.53
SMURF1-204ENST00000480055 PLPPR4Q7Z2D5 763 aa11.77□□□□□ -0.53
SMURF1-204ENST00000480055 TMEM87BQ96K49 555 aa11.77□□□□□ -0.53
SMURF1-204ENST00000480055 NEK1Q96PY6 1258 aa11.77□□□□□ -0.53
SMURF1-204ENST00000480055 PCYT2Q99447 389 aa11.77□□□□□ -0.53
SMURF1-204ENST00000480055 MXRA8Q9BRK3 442 aa11.77□□□□□ -0.53
SMURF1-204ENST00000480055 MTA3Q9BTC8 594 aa11.77□□□□□ -0.53
SMURF1-204ENST00000480055 TLR9Q9NR96 1032 aa11.77□□□□□ -0.53
SMURF1-204ENST00000480055 TSR3Q9UJK0 312 aaKnown RBP11.77□□□□□ -0.53
SMURF1-204ENST00000480055 KDM3AQ9Y4C1 1321 aa11.77□□□□□ -0.53
SMURF1-204ENST00000480055 GVINP1Q7Z2Y8 2422 aa11.77□□□□□ -0.53
SMURF1-204ENST00000480055 CACNA1AO00555 2505 aa11.77□□□□□ -0.53
SMURF1-204ENST00000480055 VPS13AQ96RL7 3174 aa11.76□□□□□ -0.53
SMURF1-204ENST00000480055 FANCMQ8IYD8 2048 aa11.76□□□□□ -0.53
SMURF1-204ENST00000480055 DMDP11532 3685 aa11.76□□□□□ -0.53
SMURF1-204ENST00000480055 DCHS1Q96JQ0 3298 aa11.76□□□□□ -0.53
SMURF1-204ENST00000480055 SMIM35A0A1B0GVV1 85 aa11.76□□□□□ -0.53
SMURF1-204ENST00000480055 DDX39AO00148 427 aaKnown RBP11.76□□□□□ -0.53
SMURF1-204ENST00000480055 FSCN2O14926 492 aa11.76□□□□□ -0.53
SMURF1-204ENST00000480055 PER2O15055 1255 aa11.76□□□□□ -0.53
SMURF1-204ENST00000480055 RPS6KA5O75582 802 aa11.76□□□□□ -0.53
SMURF1-204ENST00000480055 PDGFBP01127 241 aaPredicted RBP11.76□□□□□ -0.53
SMURF1-204ENST00000480055 ARP10275 920 aa11.76□□□□□ -0.53
SMURF1-204ENST00000480055 SARSP49591 514 aaKnown RBP11.76□□□□□ -0.53
SMURF1-204ENST00000480055 KCNC3Q14003 757 aa11.76□□□□□ -0.53
SMURF1-204ENST00000480055 ODR4Q5SWX8 454 aa11.76□□□□□ -0.53
SMURF1-204ENST00000480055 TMEM184AQ6ZMB5 413 aa11.76□□□□□ -0.53
SMURF1-204ENST00000480055 MICU3Q86XE3 530 aa11.76□□□□□ -0.53
SMURF1-204ENST00000480055 THNSL1Q8IYQ7 743 aa11.76□□□□□ -0.53
SMURF1-204ENST00000480055 FANCBQ8NB91 859 aa11.76□□□□□ -0.53
SMURF1-204ENST00000480055 CYP2W1Q8TAV3 490 aa11.76□□□□□ -0.53
SMURF1-204ENST00000480055 PGBD1Q96JS3 809 aa11.76□□□□□ -0.53
SMURF1-204ENST00000480055 LRRC2Q9BYS8 371 aa11.76□□□□□ -0.53
SMURF1-204ENST00000480055 S1PR5Q9H228 398 aa11.76□□□□□ -0.53
SMURF1-204ENST00000480055 TMX1Q9H3N1 280 aa11.76□□□□□ -0.53
SMURF1-204ENST00000480055 TMEM260Q9NX78 707 aa11.76□□□□□ -0.53
SMURF1-204ENST00000480055 H0Y858 1186 aa11.75□□□□□ -0.53
SMURF1-204ENST00000480055 FGF18O76093 207 aa11.75□□□□□ -0.53
SMURF1-204ENST00000480055 SRGAP2BP0DMP2 458 aa11.75□□□□□ -0.53
SMURF1-204ENST00000480055 KLRC1P26715 233 aa11.75□□□□□ -0.53
SMURF1-204ENST00000480055 LIFRP42702 1097 aa11.75□□□□□ -0.53
SMURF1-204ENST00000480055 SLC26A2P50443 739 aa11.75□□□□□ -0.53
SMURF1-204ENST00000480055 CEP55Q53EZ4 464 aa11.75□□□□□ -0.53
SMURF1-204ENST00000480055 FAM160B1Q5W0V3 765 aa11.75□□□□□ -0.53
SMURF1-204ENST00000480055 PDE12Q6L8Q7 609 aaKnown RBP11.75□□□□□ -0.53
SMURF1-204ENST00000480055 ANKRD54Q6NXT1 300 aa11.75□□□□□ -0.53
SMURF1-204ENST00000480055 FAM43BQ6ZT52 329 aaPredicted RBP11.75□□□□□ -0.53
SMURF1-204ENST00000480055 TMTC3Q6ZXV5 915 aa11.75□□□□□ -0.53
SMURF1-204ENST00000480055 ASCL5Q7RTU5 278 aa11.75□□□□□ -0.53
SMURF1-204ENST00000480055 TRMT1LQ7Z2T5 733 aaKnown RBP11.75□□□□□ -0.53
SMURF1-204ENST00000480055 CKAP2LQ8IYA6 745 aa11.75□□□□□ -0.53
SMURF1-204ENST00000480055 RDH13Q8NBN7 331 aa11.75□□□□□ -0.53
SMURF1-204ENST00000480055 RASGRP4Q8TDF6 673 aa11.75□□□□□ -0.53
SMURF1-204ENST00000480055 RIPOR3Q96MK2 946 aa11.75□□□□□ -0.53
SMURF1-204ENST00000480055 PPP1R16BQ96T49 567 aa11.75□□□□□ -0.53
SMURF1-204ENST00000480055 ADAM2Q99965 735 aa11.75□□□□□ -0.53
SMURF1-204ENST00000480055 AGO4Q9HCK5 861 aaKnown RBP11.75□□□□□ -0.53
SMURF1-204ENST00000480055 PLSCR2Q9NRY7 297 aa11.75□□□□□ -0.53
SMURF1-204ENST00000480055 NOC2LQ9Y3T9 749 aaKnown RBP11.75□□□□□ -0.53
SMURF1-204ENST00000480055 NFASCO94856 1347 aa11.75□□□□□ -0.53
SMURF1-204ENST00000480055 PRR23AA6NEV1 266 aa11.74□□□□□ -0.53
SMURF1-204ENST00000480055 SLC27A2O14975 620 aa11.74□□□□□ -0.53
SMURF1-204ENST00000480055 GPR182O15218 404 aa11.74□□□□□ -0.53
SMURF1-204ENST00000480055 MGEA5O60502 916 aa11.74□□□□□ -0.53
SMURF1-204ENST00000480055 FOSP01100 380 aaPredicted RBP11.74□□□□□ -0.53
SMURF1-204ENST00000480055 NBL1P41271 181 aa11.74□□□□□ -0.53
SMURF1-204ENST00000480055 ADCY7P51828 1080 aa11.74□□□□□ -0.53
SMURF1-204ENST00000480055 ERVFC1P60507 584 aa11.74□□□□□ -0.53
SMURF1-204ENST00000480055 ITGB3BPQ13352 177 aaPredicted RBP11.74□□□□□ -0.53
SMURF1-204ENST00000480055 FAM102BQ5T8I3 360 aa11.74□□□□□ -0.53
SMURF1-204ENST00000480055 WWC2Q6AWC2 1192 aa11.74□□□□□ -0.53
SMURF1-204ENST00000480055 SYCE2Q6PIF2 218 aa11.74□□□□□ -0.53
SMURF1-204ENST00000480055 SLC24A5Q71RS6 500 aa11.74□□□□□ -0.53
SMURF1-204ENST00000480055 ZBTB33Q86T24 672 aa11.74□□□□□ -0.53
SMURF1-204ENST00000480055 COLGALT1Q8NBJ5 622 aa11.74□□□□□ -0.53
SMURF1-204ENST00000480055 ATP6V0A4Q9HBG4 840 aa11.74□□□□□ -0.53
SMURF1-204ENST00000480055 RIC8AQ9NPQ8 531 aa11.74□□□□□ -0.53
SMURF1-204ENST00000480055 ZNF302Q9NR11 478 aa11.74□□□□□ -0.53
SMURF1-204ENST00000480055 C1orf112Q9NSG2 853 aa11.74□□□□□ -0.53
SMURF1-204ENST00000480055 TYW1Q9NV66 732 aaKnown RBP11.74□□□□□ -0.53
SMURF1-204ENST00000480055 HCSTQ9UBK5 93 aa11.74□□□□□ -0.53
SMURF1-204ENST00000480055 TCEAL9Q9UHQ7 104 aa11.74□□□□□ -0.53
SMURF1-204ENST00000480055 ST3GAL5Q9UNP4 418 aa11.74□□□□□ -0.53
SMURF1-204ENST00000480055 LZTS1Q9Y250 596 aa11.74□□□□□ -0.53
SMURF1-204ENST00000480055 SMCO2A6NFE2 343 aa11.73□□□□□ -0.53
SMURF1-204ENST00000480055 ZNF292O60281 2723 aa11.73□□□□□ -0.53
SMURF1-204ENST00000480055 HBP1O60381 514 aa11.73□□□□□ -0.53
SMURF1-204ENST00000480055 TECP42680 631 aa11.73□□□□□ -0.53
SMURF1-204ENST00000480055 KIZQ2M2Z5 673 aa11.73□□□□□ -0.53
SMURF1-204ENST00000480055 PLPP4Q5VZY2 271 aa11.73□□□□□ -0.53
SMURF1-204ENST00000480055 SWSAP1Q6NVH7 229 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms