RNA–Protein interactions for RNA: ENST00000479868.6

SEC13-216, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC13, Length 2,374 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-216ENST00000479868 BEND6Q5SZJ8 279 aaPredicted RBP14.22□□□□□ -0.13
SEC13-216ENST00000479868 APOBEC3FQ8IUX4 373 aaKnown RBP14.22□□□□□ -0.13
SEC13-216ENST00000479868 TXLNBQ8N3L3 684 aa14.22□□□□□ -0.13
SEC13-216ENST00000479868 RNF10Q8N5U6 811 aaKnown RBP14.22□□□□□ -0.13
SEC13-216ENST00000479868 CAGE1Q8TC20 777 aa14.22□□□□□ -0.13
SEC13-216ENST00000479868 HNRNPLLQ8WVV9 542 aaKnown RBP14.22□□□□□ -0.13
SEC13-216ENST00000479868 NOX5Q96PH1 765 aa14.22□□□□□ -0.13
SEC13-216ENST00000479868 PSMB7Q99436 277 aa14.22□□□□□ -0.13
SEC13-216ENST00000479868 GGA3Q9NZ52 723 aa14.22□□□□□ -0.13
SEC13-216ENST00000479868 LARSQ9P2J5 1176 aaKnown RBP14.22□□□□□ -0.13
SEC13-216ENST00000479868 PNMA2Q9UL42 364 aa14.22□□□□□ -0.13
SEC13-216ENST00000479868 ZNF214Q9UL59 606 aaPredicted RBP14.22□□□□□ -0.13
SEC13-216ENST00000479868 POLR2AP24928 1970 aaKnown RBP14.22□□□□□ -0.13
SEC13-216ENST00000479868 BACH1O14867 736 aa14.22□□□□□ -0.13
SEC13-216ENST00000479868 TRIM49P0CI25 452 aa14.22□□□□□ -0.13
SEC13-216ENST00000479868 TRIM49CP0CI26 452 aa14.22□□□□□ -0.13
SEC13-216ENST00000479868 DSG3P32926 999 aa14.22□□□□□ -0.13
SEC13-216ENST00000479868 NAP1L1P55209 391 aaKnown RBP14.22□□□□□ -0.13
SEC13-216ENST00000479868 IQCEQ6IPM2 695 aa14.22□□□□□ -0.13
SEC13-216ENST00000479868 RDH13Q8NBN7 331 aa14.22□□□□□ -0.13
SEC13-216ENST00000479868 KLRG1Q96E93 195 aa14.22□□□□□ -0.13
SEC13-216ENST00000479868 C12orf42Q96LP6 360 aa14.22□□□□□ -0.13
SEC13-216ENST00000479868 OSBPL9Q96SU4 736 aa14.22□□□□□ -0.13
SEC13-216ENST00000479868 ABCB6Q9NP58 842 aa14.22□□□□□ -0.13
SEC13-216ENST00000479868 SSC5DA1L4H1 1573 aa14.22□□□□□ -0.13
SEC13-216ENST00000479868 DOCK5Q9H7D0 1870 aa14.21□□□□□ -0.13
SEC13-216ENST00000479868 EXOC3O60645 756 aa14.21□□□□□ -0.13
SEC13-216ENST00000479868 NR3C2P08235 984 aa14.21□□□□□ -0.13
SEC13-216ENST00000479868 PLS3P13797 630 aa14.21□□□□□ -0.13
SEC13-216ENST00000479868 CXCR5P32302 372 aa14.21□□□□□ -0.13
SEC13-216ENST00000479868 TMEM132BQ14DG7 1078 aa14.21□□□□□ -0.13
SEC13-216ENST00000479868 NAB2Q15742 525 aa14.21□□□□□ -0.13
SEC13-216ENST00000479868 KIAA0753Q2KHM9 967 aa14.21□□□□□ -0.13
SEC13-216ENST00000479868 PLA2G4FQ68DD2 849 aa14.21□□□□□ -0.13
SEC13-216ENST00000479868 VSIG10LQ86VR7 867 aa14.21□□□□□ -0.13
SEC13-216ENST00000479868 SLC9A9Q8IVB4 645 aa14.21□□□□□ -0.13
SEC13-216ENST00000479868 C4orf19Q8IY42 314 aa14.21□□□□□ -0.13
SEC13-216ENST00000479868 RPGRIP1Q96KN7 1286 aa14.21□□□□□ -0.13
SEC13-216ENST00000479868 TLR10Q9BXR5 811 aa14.21□□□□□ -0.13
SEC13-216ENST00000479868 SUGCTQ9HAC7 445 aa14.21□□□□□ -0.13
SEC13-216ENST00000479868 LUC7LQ9NQ29 371 aaKnown RBP14.21□□□□□ -0.13
SEC13-216ENST00000479868 GPRC5CQ9NQ84 441 aa14.21□□□□□ -0.13
SEC13-216ENST00000479868 ADAMTS5Q9UNA0 930 aa14.21□□□□□ -0.13
SEC13-216ENST00000479868 WDR64B1ANS9 1081 aa14.2□□□□□ -0.14
SEC13-216ENST00000479868 PRLRP16471 622 aa14.2□□□□□ -0.14
SEC13-216ENST00000479868 PRKCIP41743 596 aa14.2□□□□□ -0.14
SEC13-216ENST00000479868 JAK3P52333 1124 aa14.2□□□□□ -0.14
SEC13-216ENST00000479868 HIRAP54198 1017 aaPredicted RBP14.2□□□□□ -0.14
SEC13-216ENST00000479868 NPEPPSP55786 919 aa14.2□□□□□ -0.14
SEC13-216ENST00000479868 PSMC5P62195 406 aa14.2□□□□□ -0.14
SEC13-216ENST00000479868 C2orf54Q08AI8 447 aa14.2□□□□□ -0.14
SEC13-216ENST00000479868 DNAAF5Q86Y56 855 aa14.2□□□□□ -0.14
SEC13-216ENST00000479868 GOLGA5Q8TBA6 731 aa14.2□□□□□ -0.14
SEC13-216ENST00000479868 PCIF1Q9H4Z3 704 aa14.2□□□□□ -0.14
SEC13-216ENST00000479868 GPRC5DQ9NZD1 345 aa14.2□□□□□ -0.14
SEC13-216ENST00000479868 RGS20O76081 388 aa14.2□□□□□ -0.14
SEC13-216ENST00000479868 KRT76Q01546 638 aa14.2□□□□□ -0.14
SEC13-216ENST00000479868 BFSP1Q12934 665 aa14.2□□□□□ -0.14
SEC13-216ENST00000479868 WDR93Q6P2C0 686 aa14.2□□□□□ -0.14
SEC13-216ENST00000479868 CCDC125Q86Z20 511 aa14.2□□□□□ -0.14
SEC13-216ENST00000479868 CCDC43Q96MW1 224 aaKnown RBP14.2□□□□□ -0.14
SEC13-216ENST00000479868 TCEAL9Q9UHQ7 104 aa14.2□□□□□ -0.14
SEC13-216ENST00000479868 HYOU1Q9Y4L1 999 aa14.2□□□□□ -0.14
SEC13-216ENST00000479868 BZW2Q9Y6E2 419 aaKnown RBP14.2□□□□□ -0.14
SEC13-216ENST00000479868 C19orf81C9J6K1 198 aa14.19□□□□□ -0.14
SEC13-216ENST00000479868 PALMO75781 387 aa14.19□□□□□ -0.14
SEC13-216ENST00000479868 MAPTP10636 758 aaKnown RBP14.19□□□□□ -0.14
SEC13-216ENST00000479868 CCND2P30279 289 aa14.19□□□□□ -0.14
SEC13-216ENST00000479868 SFNP31947 248 aa14.19□□□□□ -0.14
SEC13-216ENST00000479868 PRKG1Q13976 671 aa14.19□□□□□ -0.14
SEC13-216ENST00000479868 PPP2R5AQ15172 486 aa14.19□□□□□ -0.14
SEC13-216ENST00000479868 CBWD1Q9BRT8 395 aa14.19□□□□□ -0.14
SEC13-216ENST00000479868 SMARCAL1Q9NZC9 954 aa14.19□□□□□ -0.14
SEC13-216ENST00000479868 EHD2Q9NZN4 543 aa14.19□□□□□ -0.14
SEC13-216ENST00000479868 NAGPAQ9UK23 515 aa14.19□□□□□ -0.14
SEC13-216ENST00000479868 MAP2K7O14733 419 aa14.19□□□□□ -0.14
SEC13-216ENST00000479868 ERLIN1O75477 346 aa14.19□□□□□ -0.14
SEC13-216ENST00000479868 TCP1P17987 556 aaKnown RBP14.19□□□□□ -0.14
SEC13-216ENST00000479868 OAZ1P54368 228 aa14.19□□□□□ -0.14
SEC13-216ENST00000479868 DLG4P78352 724 aa14.19□□□□□ -0.14
SEC13-216ENST00000479868 XKR9Q5GH70 373 aa14.19□□□□□ -0.14
SEC13-216ENST00000479868 CATSPERGQ6ZRH7 1159 aa14.19□□□□□ -0.14
SEC13-216ENST00000479868 ANO5Q75V66 913 aa14.19□□□□□ -0.14
SEC13-216ENST00000479868 HAUS6Q7Z4H7 955 aa14.19□□□□□ -0.14
SEC13-216ENST00000479868 ZSWIM2Q8NEG5 633 aa14.19□□□□□ -0.14
SEC13-216ENST00000479868 GPRASP2Q96D09 838 aa14.19□□□□□ -0.14
SEC13-216ENST00000479868 INPP4AQ96PE3 977 aaPredicted RBP14.19□□□□□ -0.14
SEC13-216ENST00000479868 UBXN6Q9BZV1 441 aa14.19□□□□□ -0.14
SEC13-216ENST00000479868 TMEM206Q9H813 350 aa14.19□□□□□ -0.14
SEC13-216ENST00000479868 L1RE1Q9UN81 338 aa14.19□□□□□ -0.14
SEC13-216ENST00000479868 TELO2Q9Y4R8 837 aa14.19□□□□□ -0.14
SEC13-216ENST00000479868 SLC16A4O15374 487 aa14.18□□□□□ -0.14
SEC13-216ENST00000479868 GFPT2O94808 682 aa14.18□□□□□ -0.14
SEC13-216ENST00000479868 PEX3P56589 373 aa14.18□□□□□ -0.14
SEC13-216ENST00000479868 ALCAMQ13740 583 aa14.18□□□□□ -0.14
SEC13-216ENST00000479868 XRRA1Q6P2D8 792 aa14.18□□□□□ -0.14
SEC13-216ENST00000479868 NLRX1Q86UT6 975 aa14.18□□□□□ -0.14
SEC13-216ENST00000479868 ACCSQ96QU6 501 aa14.18□□□□□ -0.14
SEC13-216ENST00000479868 MOV10L1Q9BXT6 1211 aaKnown RBP14.18□□□□□ -0.14
SEC13-216ENST00000479868 CYP39A1Q9NYL5 469 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms