RNA–Protein interactions for RNA: ENST00000479733.5

COL13A1-208, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 2,934 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-208ENST00000479733 MARCH10Q8NA82 808 aaPredicted RBP22.43■■□□□ 1.18
COL13A1-208ENST00000479733 CTNNBL1Q8WYA6 563 aaPredicted RBP22.43■■□□□ 1.18
COL13A1-208ENST00000479733 ALG3Q92685 438 aa22.43■■□□□ 1.18
COL13A1-208ENST00000479733 TAS2R14Q9NYV8 317 aa22.43■■□□□ 1.18
COL13A1-208ENST00000479733 USP17L15C9J2P7 530 aa22.42■■□□□ 1.18
COL13A1-208ENST00000479733 USP17L13C9JLJ4 530 aa22.42■■□□□ 1.18
COL13A1-208ENST00000479733 USP17L11C9JVI0 530 aa22.42■■□□□ 1.18
COL13A1-208ENST00000479733 USP17L18D6R9N7 530 aa22.42■■□□□ 1.18
COL13A1-208ENST00000479733 USP17L22D6RA61 530 aa22.42■■□□□ 1.18
COL13A1-208ENST00000479733 USP17L17D6RBQ6 530 aa22.42■■□□□ 1.18
COL13A1-208ENST00000479733 USP17L19D6RCP7 530 aa22.42■■□□□ 1.18
COL13A1-208ENST00000479733 USP17L20D6RJB6 530 aa22.42■■□□□ 1.18
COL13A1-208ENST00000479733 PPP1R11O60927 126 aaPredicted RBP22.42■■□□□ 1.18
COL13A1-208ENST00000479733 PLCG2P16885 1265 aa22.42■■□□□ 1.18
COL13A1-208ENST00000479733 USP17L24Q0WX57 530 aa22.42■■□□□ 1.18
COL13A1-208ENST00000479733 ITIH4Q14624 930 aa22.42■■□□□ 1.18
COL13A1-208ENST00000479733 LRCH2Q5VUJ6 765 aa22.42■■□□□ 1.18
COL13A1-208ENST00000479733 USP17L6PQ6QN14 398 aa22.42■■□□□ 1.18
COL13A1-208ENST00000479733 SPICE1Q8N0Z3 855 aa22.42■■□□□ 1.18
COL13A1-208ENST00000479733 PGM2Q96G03 612 aa22.42■■□□□ 1.18
COL13A1-208ENST00000479733 FGFR1OP2Q9NVK5 253 aa22.42■■□□□ 1.18
COL13A1-208ENST00000479733 PTPN22Q9Y2R2 807 aa22.42■■□□□ 1.18
COL13A1-208ENST00000479733 RPTORQ8N122 1335 aa22.42■■□□□ 1.18
COL13A1-208ENST00000479733 SFI1A8K8P3 1242 aa22.42■■□□□ 1.18
COL13A1-208ENST00000479733 RSPH10B2B2RC85 870 aa22.42■■□□□ 1.18
COL13A1-208ENST00000479733 KIAA0391O15091 583 aaKnown RBP22.42■■□□□ 1.18
COL13A1-208ENST00000479733 RSPH10BP0C881 870 aa22.42■■□□□ 1.18
COL13A1-208ENST00000479733 STAT1P42224 750 aa22.42■■□□□ 1.18
COL13A1-208ENST00000479733 ALDH5A1P51649 535 aaPredicted RBP22.42■■□□□ 1.18
COL13A1-208ENST00000479733 TBC1D9BQ66K14 1250 aa22.42■■□□□ 1.18
COL13A1-208ENST00000479733 ECT2Q9H8V3 914 aa22.42■■□□□ 1.18
COL13A1-208ENST00000479733 C15orf41Q9Y2V0 281 aa22.42■■□□□ 1.18
COL13A1-208ENST00000479733 IGF2BP3O00425 579 aaKnown RBP eCLIP22.41■■□□□ 1.18
COL13A1-208ENST00000479733 NUDT17P0C025 328 aa22.41■■□□□ 1.18
COL13A1-208ENST00000479733 C16orf86Q6ZW13 317 aa22.41■■□□□ 1.18
COL13A1-208ENST00000479733 FMNL3Q8IVF7 1028 aa22.41■■□□□ 1.18
COL13A1-208ENST00000479733 HOOK2Q96ED9 719 aa22.41■■□□□ 1.18
COL13A1-208ENST00000479733 ANKRD2Q9GZV1 360 aa22.41■■□□□ 1.18
COL13A1-208ENST00000479733 THAP2Q9H0W7 228 aa22.41■■□□□ 1.18
COL13A1-208ENST00000479733 ROBO3Q96MS0 1386 aa22.41■■□□□ 1.18
COL13A1-208ENST00000479733 PEX19P40855 299 aa22.41■■□□□ 1.18
COL13A1-208ENST00000479733 SPDL1Q96EA4 605 aa22.41■■□□□ 1.18
COL13A1-208ENST00000479733 DHX36Q9H2U1 1008 aaKnown RBP22.41■■□□□ 1.18
COL13A1-208ENST00000479733 EBF2Q9HAK2 575 aa22.41■■□□□ 1.18
COL13A1-208ENST00000479733 TRIM33Q9UPN9 1127 aa22.41■■□□□ 1.18
COL13A1-208ENST00000479733 BCS1LQ9Y276 419 aa22.41■■□□□ 1.18
COL13A1-208ENST00000479733 KDM3AQ9Y4C1 1321 aa22.41■■□□□ 1.18
COL13A1-208ENST00000479733 GSTA1P08263 222 aa22.41■■□□□ 1.18
COL13A1-208ENST00000479733 CREB1P16220 341 aa22.41■■□□□ 1.18
COL13A1-208ENST00000479733 RPL21P46778 160 aaKnown RBP22.41■■□□□ 1.18
COL13A1-208ENST00000479733 PLS1Q14651 629 aa22.41■■□□□ 1.18
COL13A1-208ENST00000479733 PALB2Q86YC2 1186 aa22.41■■□□□ 1.18
COL13A1-208ENST00000479733 SLC35C1Q96A29 364 aa22.41■■□□□ 1.18
COL13A1-208ENST00000479733 SNED1Q8TER0 1413 aa22.4■■□□□ 1.18
COL13A1-208ENST00000479733 A0A0A6YYK5 440 aaPredicted RBP22.4■■□□□ 1.18
COL13A1-208ENST00000479733 TCP11X1B4DZS4 312 aa22.4■■□□□ 1.18
COL13A1-208ENST00000479733 NR3C1P04150 777 aa22.4■■□□□ 1.18
COL13A1-208ENST00000479733 NQO1P15559 274 aaKnown RBP22.4■■□□□ 1.18
COL13A1-208ENST00000479733 JAM2P57087 298 aa22.4■■□□□ 1.18
COL13A1-208ENST00000479733 MAPK7Q13164 816 aa22.4■■□□□ 1.18
COL13A1-208ENST00000479733 ADGRF4Q8IZF3 695 aa22.4■■□□□ 1.18
COL13A1-208ENST00000479733 ANKRD42Q8N9B4 389 aa22.4■■□□□ 1.18
COL13A1-208ENST00000479733 RFFLQ8WZ73 363 aa22.4■■□□□ 1.18
COL13A1-208ENST00000479733 REEP2Q9BRK0 252 aa22.4■■□□□ 1.18
COL13A1-208ENST00000479733 NENFQ9UMX5 172 aa22.4■■□□□ 1.18
COL13A1-208ENST00000479733 COL22A1Q8NFW1 1626 aaPredicted RBP22.4■■□□□ 1.18
COL13A1-208ENST00000479733 SCN7AQ01118 1682 aa22.4■■□□□ 1.18
COL13A1-208ENST00000479733 RASGRF2O14827 1237 aa22.4■■□□□ 1.18
COL13A1-208ENST00000479733 RARAP10276 462 aa22.4■■□□□ 1.18
COL13A1-208ENST00000479733 CCNHP51946 323 aaPredicted RBP22.4■■□□□ 1.18
COL13A1-208ENST00000479733 NCALDP61601 193 aa22.4■■□□□ 1.18
COL13A1-208ENST00000479733 ZKSCAN8Q15776 578 aaPredicted RBP22.4■■□□□ 1.18
COL13A1-208ENST00000479733 ARHGAP44Q17R89 818 aa22.4■■□□□ 1.18
COL13A1-208ENST00000479733 C6orf118Q5T5N4 469 aa22.4■■□□□ 1.18
COL13A1-208ENST00000479733 PPP4R3CPQ6ZMV5 832 aa22.4■■□□□ 1.18
COL13A1-208ENST00000479733 KLHL29Q96CT2 875 aa22.4■■□□□ 1.18
COL13A1-208ENST00000479733 PSTPIP2Q9H939 334 aa22.4■■□□□ 1.18
COL13A1-208ENST00000479733 JMJD4Q9H9V9 463 aa22.4■■□□□ 1.18
COL13A1-208ENST00000479733 PNMA3Q9UL41 463 aa22.4■■□□□ 1.18
COL13A1-208ENST00000479733 THRAP3Q9Y2W1 955 aaKnown RBP22.4■■□□□ 1.18
COL13A1-208ENST00000479733 GCNT3O95395 438 aa22.39■■□□□ 1.18
COL13A1-208ENST00000479733 MARCKSL1P49006 195 aa22.39■■□□□ 1.18
COL13A1-208ENST00000479733 SLC12A3P55017 1021 aa22.39■■□□□ 1.18
COL13A1-208ENST00000479733 MAP2K1Q02750 393 aaPredicted RBP22.39■■□□□ 1.18
COL13A1-208ENST00000479733 GIT2Q14161 759 aa22.39■■□□□ 1.18
COL13A1-208ENST00000479733 BARGINQ6ZT62 677 aa22.39■■□□□ 1.18
COL13A1-208ENST00000479733 WDR66Q8TBY9 1149 aa22.39■■□□□ 1.18
COL13A1-208ENST00000479733 NSRP1Q9H0G5 558 aaKnown RBP22.39■■□□□ 1.18
COL13A1-208ENST00000479733 AFF2P51816 1311 aa22.39■■□□□ 1.17
COL13A1-208ENST00000479733 SNX3O60493 162 aa22.39■■□□□ 1.17
COL13A1-208ENST00000479733 GCKP35557 465 aa22.39■■□□□ 1.17
COL13A1-208ENST00000479733 CYP4A11Q02928 519 aa22.39■■□□□ 1.17
COL13A1-208ENST00000479733 DRAP1Q14919 205 aaPredicted RBP22.39■■□□□ 1.17
COL13A1-208ENST00000479733 LONRF1Q17RB8 773 aa22.39■■□□□ 1.17
COL13A1-208ENST00000479733 KRT35Q92764 455 aa22.39■■□□□ 1.17
COL13A1-208ENST00000479733 GRHL1Q9NZI5 618 aa22.39■■□□□ 1.17
COL13A1-208ENST00000479733 COG5Q9UP83 839 aa22.39■■□□□ 1.17
COL13A1-208ENST00000479733 FERP16591 822 aa22.38■■□□□ 1.17
COL13A1-208ENST00000479733 ADCY1Q08828 1119 aa22.38■■□□□ 1.17
COL13A1-208ENST00000479733 CNGA2Q16280 664 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms