RNA–Protein interactions for RNA: ENST00000479602.5

DDX56-211, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-211ENST00000479602 CTSHP09668 335 aa9.97□□□□□ -0.81
DDX56-211ENST00000479602 HOXD11P31277 338 aaPredicted RBP9.97□□□□□ -0.81
DDX56-211ENST00000479602 MCM7P33993 719 aa9.97□□□□□ -0.81
DDX56-211ENST00000479602 GPM6BQ13491 265 aa9.97□□□□□ -0.81
DDX56-211ENST00000479602 SF3A1Q15459 793 aaKnown RBP9.97□□□□□ -0.81
DDX56-211ENST00000479602 GRIK4Q16099 956 aa9.97□□□□□ -0.81
DDX56-211ENST00000479602 PUS10Q3MIT2 529 aaKnown RBP9.97□□□□□ -0.81
DDX56-211ENST00000479602 UTP14CQ5TAP6 766 aaKnown RBP9.97□□□□□ -0.81
DDX56-211ENST00000479602 FAM160B1Q5W0V3 765 aa9.97□□□□□ -0.81
DDX56-211ENST00000479602 DTHD1Q6ZMT9 781 aa9.97□□□□□ -0.81
DDX56-211ENST00000479602 FERMT3Q86UX7 667 aa9.97□□□□□ -0.81
DDX56-211ENST00000479602 EXOC8Q8IYI6 725 aa9.97□□□□□ -0.81
DDX56-211ENST00000479602 GJD3Q8N144 294 aa9.97□□□□□ -0.81
DDX56-211ENST00000479602 BANK1Q8NDB2 785 aa9.97□□□□□ -0.81
DDX56-211ENST00000479602 ERMNQ8TAM6 284 aa9.97□□□□□ -0.81
DDX56-211ENST00000479602 LINC01599Q8WXQ3 324 aa9.97□□□□□ -0.81
DDX56-211ENST00000479602 PABPC5Q96DU9 382 aaKnown RBP9.97□□□□□ -0.81
DDX56-211ENST00000479602 USP28Q96RU2 1077 aa9.97□□□□□ -0.81
DDX56-211ENST00000479602 CCSER1Q9C0I3 900 aa9.97□□□□□ -0.81
DDX56-211ENST00000479602 UNC45AQ9H3U1 944 aa9.97□□□□□ -0.81
DDX56-211ENST00000479602 FBXO2Q9UK22 296 aaPredicted RBP9.97□□□□□ -0.81
DDX56-211ENST00000479602 KDM3AQ9Y4C1 1321 aa9.97□□□□□ -0.81
DDX56-211ENST00000479602 WDFY4Q6ZS81 3184 aa9.96□□□□□ -0.81
DDX56-211ENST00000479602 ARID2Q68CP9 1835 aa9.96□□□□□ -0.81
DDX56-211ENST00000479602 RRN3P2A6NIE6 340 aa9.96□□□□□ -0.82
DDX56-211ENST00000479602 GAS2O43903 313 aaKnown RBP9.96□□□□□ -0.82
DDX56-211ENST00000479602 DTNBO60941 627 aa9.96□□□□□ -0.82
DDX56-211ENST00000479602 INSRRP14616 1297 aa9.96□□□□□ -0.82
DDX56-211ENST00000479602 IL9P15248 144 aa9.96□□□□□ -0.82
DDX56-211ENST00000479602 KCNA5P22460 613 aa9.96□□□□□ -0.82
DDX56-211ENST00000479602 QARSP47897 775 aaKnown RBP9.96□□□□□ -0.82
DDX56-211ENST00000479602 PSMC5P62195 406 aa9.96□□□□□ -0.82
DDX56-211ENST00000479602 PPFIA1Q13136 1202 aa9.96□□□□□ -0.82
DDX56-211ENST00000479602 PTPROQ16827 1216 aa9.96□□□□□ -0.82
DDX56-211ENST00000479602 TCEAL5Q5H9L2 206 aa9.96□□□□□ -0.82
DDX56-211ENST00000479602 CCDC60Q8IWA6 550 aaPredicted RBP9.96□□□□□ -0.82
DDX56-211ENST00000479602 KRI1Q8N9T8 703 aaKnown RBP9.96□□□□□ -0.82
DDX56-211ENST00000479602 ATP8B4Q8TF62 1192 aa9.96□□□□□ -0.82
DDX56-211ENST00000479602 DNAJB3Q8WWF6 145 aa9.96□□□□□ -0.82
DDX56-211ENST00000479602 BBXQ8WY36 941 aaPredicted RBP9.96□□□□□ -0.82
DDX56-211ENST00000479602 YME1L1Q96TA2 773 aa9.96□□□□□ -0.82
DDX56-211ENST00000479602 PYM1Q9BRP8 204 aaKnown RBP9.96□□□□□ -0.82
DDX56-211ENST00000479602 NIFKQ9BYG3 293 aaKnown RBP9.96□□□□□ -0.82
DDX56-211ENST00000479602 NT5C3AQ9H0P0 336 aa9.96□□□□□ -0.82
DDX56-211ENST00000479602 AZI2Q9H6S1 392 aa9.96□□□□□ -0.82
DDX56-211ENST00000479602 ZSWIM4Q9H7M6 989 aa9.96□□□□□ -0.82
DDX56-211ENST00000479602 KCND2Q9NZV8 630 aa9.96□□□□□ -0.82
DDX56-211ENST00000479602 PCDHA2Q9Y5H9 948 aa9.96□□□□□ -0.82
DDX56-211ENST00000479602 ZDBF2Q9HCK1 2354 aa9.96□□□□□ -0.82
DDX56-211ENST00000479602 TCHHQ07283 1943 aa9.95□□□□□ -0.82
DDX56-211ENST00000479602 A0A1W2PQ27 194 aa9.95□□□□□ -0.82
DDX56-211ENST00000479602 A0A1W2PQ64 194 aa9.95□□□□□ -0.82
DDX56-211ENST00000479602 A0A1W2PQD8 194 aa9.95□□□□□ -0.82
DDX56-211ENST00000479602 SPTLC2O15270 562 aa9.95□□□□□ -0.82
DDX56-211ENST00000479602 GRM6O15303 877 aa9.95□□□□□ -0.82
DDX56-211ENST00000479602 NCK2O43639 380 aa9.95□□□□□ -0.82
DDX56-211ENST00000479602 HBP1O60381 514 aa9.95□□□□□ -0.82
DDX56-211ENST00000479602 CUTAO60888 179 aa9.95□□□□□ -0.82
DDX56-211ENST00000479602 UPP2O95045 317 aa9.95□□□□□ -0.82
DDX56-211ENST00000479602 GHRP10912 638 aa9.95□□□□□ -0.82
DDX56-211ENST00000479602 STAT5BP51692 787 aa9.95□□□□□ -0.82
DDX56-211ENST00000479602 PLCB4Q15147 1175 aa9.95□□□□□ -0.82
DDX56-211ENST00000479602 TARBP2Q15633 366 aaKnown RBP9.95□□□□□ -0.82
DDX56-211ENST00000479602 ZNF174Q15697 407 aa9.95□□□□□ -0.82
DDX56-211ENST00000479602 CSPP1Q1MSJ5 1256 aa9.95□□□□□ -0.82
DDX56-211ENST00000479602 TIGD5Q53EQ6 642 aa9.95□□□□□ -0.82
DDX56-211ENST00000479602 XKR3Q5GH77 459 aa9.95□□□□□ -0.82
DDX56-211ENST00000479602 TMEM31Q5JXX7 168 aa9.95□□□□□ -0.82
DDX56-211ENST00000479602 AXDND1Q5T1B0 1012 aaPredicted RBP9.95□□□□□ -0.82
DDX56-211ENST00000479602 ADALQ6DHV7 355 aa9.95□□□□□ -0.82
DDX56-211ENST00000479602 PTCRAQ6ISU1 281 aaPredicted RBP9.95□□□□□ -0.82
DDX56-211ENST00000479602 TSHZ1Q6ZSZ6 1077 aa9.95□□□□□ -0.82
DDX56-211ENST00000479602 MIER3Q7Z3K6 550 aa9.95□□□□□ -0.82
DDX56-211ENST00000479602 NME8Q8N427 588 aa9.95□□□□□ -0.82
DDX56-211ENST00000479602 ZBTB10Q96DT7 871 aa9.95□□□□□ -0.82
DDX56-211ENST00000479602 PLVAPQ9BX97 442 aa9.95□□□□□ -0.82
DDX56-211ENST00000479602 LMAN2LQ9H0V9 348 aa9.95□□□□□ -0.82
DDX56-211ENST00000479602 TMX1Q9H3N1 280 aa9.95□□□□□ -0.82
DDX56-211ENST00000479602 CUEDC2Q9H467 287 aa9.95□□□□□ -0.82
DDX56-211ENST00000479602 NSUN3Q9H649 340 aaKnown RBP9.95□□□□□ -0.82
DDX56-211ENST00000479602 MAGEF1Q9HAY2 307 aa9.95□□□□□ -0.82
DDX56-211ENST00000479602 ANKEF1Q9NU02 776 aa9.95□□□□□ -0.82
DDX56-211ENST00000479602 TUBE1Q9UJT0 475 aa9.95□□□□□ -0.82
DDX56-211ENST00000479602 DBR1Q9UK59 544 aaKnown RBP9.95□□□□□ -0.82
DDX56-211ENST00000479602 PLAGL2Q9UPG8 496 aa9.95□□□□□ -0.82
DDX56-211ENST00000479602 SIP14410 1827 aa9.94□□□□□ -0.82
DDX56-211ENST00000479602 IGKV6-21A0A0C4DH24 114 aa9.94□□□□□ -0.82
DDX56-211ENST00000479602 SMIM35A0A1B0GVV1 85 aa9.94□□□□□ -0.82
DDX56-211ENST00000479602 ZBTB42B2RXF5 422 aa9.94□□□□□ -0.82
DDX56-211ENST00000479602 EML1O00423 815 aa9.94□□□□□ -0.82
DDX56-211ENST00000479602 SLITRK3O94933 977 aa9.94□□□□□ -0.82
DDX56-211ENST00000479602 STBD1O95210 358 aa9.94□□□□□ -0.82
DDX56-211ENST00000479602 SPATA31C1P0DKV0 1188 aa9.94□□□□□ -0.82
DDX56-211ENST00000479602 ATP4AP20648 1035 aa9.94□□□□□ -0.82
DDX56-211ENST00000479602 SCP2P22307 547 aa9.94□□□□□ -0.82
DDX56-211ENST00000479602 DNAJB1P25685 340 aa9.94□□□□□ -0.82
DDX56-211ENST00000479602 FOSBP53539 338 aa9.94□□□□□ -0.82
DDX56-211ENST00000479602 FAM189BP81408 668 aa9.94□□□□□ -0.82
DDX56-211ENST00000479602 MRPS6P82932 125 aaKnown RBP9.94□□□□□ -0.82
DDX56-211ENST00000479602 ZP2Q05996 745 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms