RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 NMT1P30419 496 aaKnown RBP26.78■■□□□ 1.88
SYNGAP1-206ENST00000479510 GALCP54803 685 aa26.78■■□□□ 1.88
SYNGAP1-206ENST00000479510 DAAM2Q86T65 1068 aa26.78■■□□□ 1.88
SYNGAP1-206ENST00000479510 PIGOQ8TEQ8 1089 aa26.78■■□□□ 1.88
SYNGAP1-206ENST00000479510 FIZ1Q96SL8 496 aa26.78■■□□□ 1.88
SYNGAP1-206ENST00000479510 TMBIM4Q9HC24 238 aa26.78■■□□□ 1.88
SYNGAP1-206ENST00000479510 ARHGEF10LQ9HCE6 1279 aa26.78■■□□□ 1.88
SYNGAP1-206ENST00000479510 PLAAQ9Y263 795 aa26.78■■□□□ 1.88
SYNGAP1-206ENST00000479510 LNX1Q8TBB1 728 aaPredicted RBP26.77■■□□□ 1.88
SYNGAP1-206ENST00000479510 DNAJC12Q9UKB3 198 aa26.77■■□□□ 1.88
SYNGAP1-206ENST00000479510 GUCY2CP25092 1073 aa26.77■■□□□ 1.88
SYNGAP1-206ENST00000479510 SETQ01105 290 aaPredicted RBP26.77■■□□□ 1.88
SYNGAP1-206ENST00000479510 FAM178BQ8IXR5 827 aa26.77■■□□□ 1.88
SYNGAP1-206ENST00000479510 TMEM174Q8WUU8 243 aa26.77■■□□□ 1.88
SYNGAP1-206ENST00000479510 PAGR1Q9BTK6 254 aa26.77■■□□□ 1.88
SYNGAP1-206ENST00000479510 A0A1W2PRG0 241 aa26.76■■□□□ 1.87
SYNGAP1-206ENST00000479510 GAS7O60861 476 aa26.76■■□□□ 1.87
SYNGAP1-206ENST00000479510 TRIM37O94972 964 aa26.76■■□□□ 1.87
SYNGAP1-206ENST00000479510 DRAP1Q14919 205 aaPredicted RBP26.76■■□□□ 1.87
SYNGAP1-206ENST00000479510 TRADDQ15628 312 aa26.76■■□□□ 1.87
SYNGAP1-206ENST00000479510 CC2D2BQ6DHV5 1058 aa26.76■■□□□ 1.87
SYNGAP1-206ENST00000479510 GJB7Q6PEY0 223 aa26.76■■□□□ 1.87
SYNGAP1-206ENST00000479510 SH2D3CQ8N5H7 860 aa26.76■■□□□ 1.87
SYNGAP1-206ENST00000479510 NEK9Q8TD19 979 aa26.76■■□□□ 1.87
SYNGAP1-206ENST00000479510 ZFP91Q96JP5 570 aaPredicted RBP26.76■■□□□ 1.87
SYNGAP1-206ENST00000479510 NAP1L3Q99457 506 aaPredicted RBP26.76■■□□□ 1.87
SYNGAP1-206ENST00000479510 EPN3Q9H201 632 aa26.76■■□□□ 1.87
SYNGAP1-206ENST00000479510 FAM114A2Q9NRY5 505 aa26.76■■□□□ 1.87
SYNGAP1-206ENST00000479510 AGPAT3Q9NRZ7 376 aa26.76■■□□□ 1.87
SYNGAP1-206ENST00000479510 HSD17B3P37058 310 aa26.75■■□□□ 1.87
SYNGAP1-206ENST00000479510 PDCLQ13371 301 aa26.75■■□□□ 1.87
SYNGAP1-206ENST00000479510 BIRC3Q13489 604 aa26.75■■□□□ 1.87
SYNGAP1-206ENST00000479510 SPDYCQ5MJ68 293 aa26.75■■□□□ 1.87
SYNGAP1-206ENST00000479510 KCTD16Q68DU8 428 aa26.75■■□□□ 1.87
SYNGAP1-206ENST00000479510 STYK1Q6J9G0 422 aa26.75■■□□□ 1.87
SYNGAP1-206ENST00000479510 RUFY4Q6ZNE9 571 aa26.75■■□□□ 1.87
SYNGAP1-206ENST00000479510 FLAD1Q8NFF5 587 aa26.75■■□□□ 1.87
SYNGAP1-206ENST00000479510 GOLPH3Q9H4A6 298 aa26.75■■□□□ 1.87
SYNGAP1-206ENST00000479510 GOPCQ9HD26 462 aa26.75■■□□□ 1.87
SYNGAP1-206ENST00000479510 APEX2Q9UBZ4 518 aa26.75■■□□□ 1.87
SYNGAP1-206ENST00000479510 MRPL11Q9Y3B7 192 aaKnown RBP26.75■■□□□ 1.87
SYNGAP1-206ENST00000479510 FAM169AQ9Y6X4 670 aa26.75■■□□□ 1.87
SYNGAP1-206ENST00000479510 SFI1A8K8P3 1242 aa26.75■■□□□ 1.87
SYNGAP1-206ENST00000479510 PLA2G6O60733 806 aa26.75■■□□□ 1.87
SYNGAP1-206ENST00000479510 VIL1P09327 827 aaKnown RBP26.75■■□□□ 1.87
SYNGAP1-206ENST00000479510 JAG1P78504 1218 aa26.75■■□□□ 1.87
SYNGAP1-206ENST00000479510 PPATQ06203 517 aa26.75■■□□□ 1.87
SYNGAP1-206ENST00000479510 CEP55Q53EZ4 464 aa26.75■■□□□ 1.87
SYNGAP1-206ENST00000479510 CEP85LQ5SZL2 805 aa26.75■■□□□ 1.87
SYNGAP1-206ENST00000479510 TADA2BQ86TJ2 420 aa26.75■■□□□ 1.87
SYNGAP1-206ENST00000479510 CTNNBL1Q8WYA6 563 aaPredicted RBP26.75■■□□□ 1.87
SYNGAP1-206ENST00000479510 RNPC3Q96LT9 517 aaKnown RBP26.75■■□□□ 1.87
SYNGAP1-206ENST00000479510 INTS2Q9H0H0 1204 aaKnown RBP26.75■■□□□ 1.87
SYNGAP1-206ENST00000479510 TMX2Q9Y320 296 aa26.75■■□□□ 1.87
SYNGAP1-206ENST00000479510 H0YGN5 161 aa26.74■■□□□ 1.87
SYNGAP1-206ENST00000479510 MYZAPP0CAP1 466 aa26.74■■□□□ 1.87
SYNGAP1-206ENST00000479510 LSP1P33241 339 aa26.74■■□□□ 1.87
SYNGAP1-206ENST00000479510 ITGB3BPQ13352 177 aaPredicted RBP26.74■■□□□ 1.87
SYNGAP1-206ENST00000479510 TTC31Q49AM3 519 aaPredicted RBP26.74■■□□□ 1.87
SYNGAP1-206ENST00000479510 CHURC1Q8WUH1 139 aa26.74■■□□□ 1.87
SYNGAP1-206ENST00000479510 STRA6Q9BX79 667 aa26.74■■□□□ 1.87
SYNGAP1-206ENST00000479510 AP1M1Q9BXS5 423 aa26.74■■□□□ 1.87
SYNGAP1-206ENST00000479510 RANBP17Q9H2T7 1088 aaKnown RBP26.74■■□□□ 1.87
SYNGAP1-206ENST00000479510 NFS1Q9Y697 457 aa26.74■■□□□ 1.87
SYNGAP1-206ENST00000479510 NDUFAB1O14561 156 aa26.74■■□□□ 1.87
SYNGAP1-206ENST00000479510 HADHBP55084 474 aaKnown RBP26.74■■□□□ 1.87
SYNGAP1-206ENST00000479510 ALCAMQ13740 583 aa26.74■■□□□ 1.87
SYNGAP1-206ENST00000479510 KIF22Q14807 665 aa26.74■■□□□ 1.87
SYNGAP1-206ENST00000479510 ZC2HC1CQ53FD0 456 aaPredicted RBP26.74■■□□□ 1.87
SYNGAP1-206ENST00000479510 B3GNT9Q6UX72 402 aa26.74■■□□□ 1.87
SYNGAP1-206ENST00000479510 COL23A1Q86Y22 540 aaPredicted RBP26.74■■□□□ 1.87
SYNGAP1-206ENST00000479510 CSRNP1Q96S65 589 aa26.74■■□□□ 1.87
SYNGAP1-206ENST00000479510 DDX47Q9H0S4 455 aaKnown RBP26.74■■□□□ 1.87
SYNGAP1-206ENST00000479510 CARD9Q9H257 536 aa26.74■■□□□ 1.87
SYNGAP1-206ENST00000479510 BCAS3Q9H6U6 928 aa26.74■■□□□ 1.87
SYNGAP1-206ENST00000479510 SCN9AQ15858 1988 aa26.73■■□□□ 1.87
SYNGAP1-206ENST00000479510 PPP1R37O75864 691 aa26.73■■□□□ 1.87
SYNGAP1-206ENST00000479510 CFBP00751 764 aa26.73■■□□□ 1.87
SYNGAP1-206ENST00000479510 POLD1P28340 1107 aa26.73■■□□□ 1.87
SYNGAP1-206ENST00000479510 TCEAL1Q15170 157 aa26.73■■□□□ 1.87
SYNGAP1-206ENST00000479510 GLYCTKQ8IVS8 523 aa26.73■■□□□ 1.87
SYNGAP1-206ENST00000479510 SLC35G2Q8TBE7 412 aa26.73■■□□□ 1.87
SYNGAP1-206ENST00000479510 GPR88Q9GZN0 384 aa26.73■■□□□ 1.87
SYNGAP1-206ENST00000479510 TDRD3Q9H7E2 651 aaKnown RBP26.73■■□□□ 1.87
SYNGAP1-206ENST00000479510 EFCC1Q9HA90 598 aa26.73■■□□□ 1.87
SYNGAP1-206ENST00000479510 SLX4Q8IY92 1834 aa26.73■■□□□ 1.87
SYNGAP1-206ENST00000479510 LOXHD1Q8IVV2 1947 aa26.73■■□□□ 1.87
SYNGAP1-206ENST00000479510 BUB1BO60566 1050 aaPredicted RBP26.72■■□□□ 1.87
SYNGAP1-206ENST00000479510 MAPTP10636 758 aaKnown RBP26.72■■□□□ 1.87
SYNGAP1-206ENST00000479510 MDH1P40925 334 aaKnown RBP26.72■■□□□ 1.87
SYNGAP1-206ENST00000479510 MYL7Q01449 175 aa26.72■■□□□ 1.87
SYNGAP1-206ENST00000479510 ZNF622Q969S3 477 aaKnown RBP eCLIP26.72■■□□□ 1.871e-6■■■■■ 28.2
SYNGAP1-206ENST00000479510 RIT2Q99578 217 aa26.72■■□□□ 1.87
SYNGAP1-206ENST00000479510 GGA2Q9UJY4 613 aa26.72■■□□□ 1.87
SYNGAP1-206ENST00000479510 P4HA2O15460 535 aa26.72■■□□□ 1.87
SYNGAP1-206ENST00000479510 MMP10P09238 476 aa26.72■■□□□ 1.87
SYNGAP1-206ENST00000479510 ATP1A2P50993 1020 aa26.72■■□□□ 1.87
SYNGAP1-206ENST00000479510 ODR4Q5SWX8 454 aa26.72■■□□□ 1.87
SYNGAP1-206ENST00000479510 AKT1S1Q96B36 256 aa26.72■■□□□ 1.87
SYNGAP1-206ENST00000479510 DEFB129Q9H1M3 183 aa26.72■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms