RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 CCNA1P78396 465 aa15.44■□□□□ 0.06
COL20A1-206ENST00000479501 NNTQ13423 1086 aa15.44■□□□□ 0.06
COL20A1-206ENST00000479501 STXBP2Q15833 593 aa15.44■□□□□ 0.06
COL20A1-206ENST00000479501 CCDC197Q8NCU1 140 aa15.44■□□□□ 0.06
COL20A1-206ENST00000479501 ANKRD36BP1Q96IX9 119 aa15.44■□□□□ 0.06
COL20A1-206ENST00000479501 MSTO1Q9BUK6 570 aa15.44■□□□□ 0.06
COL20A1-206ENST00000479501 VCPKMTQ9H867 229 aa15.44■□□□□ 0.06
COL20A1-206ENST00000479501 TRIM10Q9UDY6 481 aa15.44■□□□□ 0.06
COL20A1-206ENST00000479501 AKAP12Q02952 1782 aa15.43■□□□□ 0.06
COL20A1-206ENST00000479501 IL1R1P14778 569 aa15.43■□□□□ 0.06
COL20A1-206ENST00000479501 IFNAR2P48551 515 aa15.43■□□□□ 0.06
COL20A1-206ENST00000479501 CUL1Q13616 776 aa15.43■□□□□ 0.06
COL20A1-206ENST00000479501 PHLDB3Q6NSJ2 640 aa15.43■□□□□ 0.06
COL20A1-206ENST00000479501 PPP1R2P3Q6NXS1 205 aa15.43■□□□□ 0.06
COL20A1-206ENST00000479501 HAUS6Q7Z4H7 955 aa15.43■□□□□ 0.06
COL20A1-206ENST00000479501 EXOC8Q8IYI6 725 aa15.43■□□□□ 0.06
COL20A1-206ENST00000479501 FMO2Q99518 471 aa15.43■□□□□ 0.06
COL20A1-206ENST00000479501 NXF1Q9UBU9 619 aaKnown RBP15.43■□□□□ 0.06
COL20A1-206ENST00000479501 ZNF70Q9UC06 446 aaPredicted RBP15.43■□□□□ 0.06
COL20A1-206ENST00000479501 SLC26A4O43511 780 aa15.43■□□□□ 0.06
COL20A1-206ENST00000479501 ZBTB7AO95365 584 aa15.43■□□□□ 0.06
COL20A1-206ENST00000479501 DR1Q01658 176 aa15.43■□□□□ 0.06
COL20A1-206ENST00000479501 LMNB2Q03252 620 aa15.43■□□□□ 0.06
COL20A1-206ENST00000479501 LGSNQ5TDP6 509 aa15.43■□□□□ 0.06
COL20A1-206ENST00000479501 ZBTB33Q86T24 672 aa15.43■□□□□ 0.06
COL20A1-206ENST00000479501 TADA2BQ86TJ2 420 aa15.43■□□□□ 0.06
COL20A1-206ENST00000479501 GLYCTKQ8IVS8 523 aa15.43■□□□□ 0.06
COL20A1-206ENST00000479501 SPATA4Q8NEY3 305 aa15.43■□□□□ 0.06
COL20A1-206ENST00000479501 ERGIC2Q96RQ1 377 aa15.43■□□□□ 0.06
COL20A1-206ENST00000479501 ATP6V0A4Q9HBG4 840 aa15.43■□□□□ 0.06
COL20A1-206ENST00000479501 GABBR1Q9UBS5 961 aa15.43■□□□□ 0.06
COL20A1-206ENST00000479501 SNX12Q9UMY4 172 aa15.43■□□□□ 0.06
COL20A1-206ENST00000479501 MIF4GDA9UHW6 222 aaKnown RBP15.43■□□□□ 0.06
COL20A1-206ENST00000479501 SRGAP2CP0DJJ0 459 aa15.43■□□□□ 0.06
COL20A1-206ENST00000479501 GRB10Q13322 594 aa15.43■□□□□ 0.06
COL20A1-206ENST00000479501 PALM2Q8IXS6 379 aa15.43■□□□□ 0.06
COL20A1-206ENST00000479501 PSMD1Q99460 953 aa15.43■□□□□ 0.06
COL20A1-206ENST00000479501 INTS2Q9H0H0 1204 aaKnown RBP15.43■□□□□ 0.06
COL20A1-206ENST00000479501 FMN2Q9NZ56 1722 aa15.43■□□□□ 0.06
COL20A1-206ENST00000479501 CACNA1FO60840 1977 aa15.43■□□□□ 0.06
COL20A1-206ENST00000479501 SMIM22K7EJ46 135 aa15.42■□□□□ 0.06
COL20A1-206ENST00000479501 VSNL1P62760 191 aa15.42■□□□□ 0.06
COL20A1-206ENST00000479501 CAPN12Q6ZSI9 719 aa15.42■□□□□ 0.06
COL20A1-206ENST00000479501 CFAP57Q96MR6 1250 aa15.42■□□□□ 0.06
COL20A1-206ENST00000479501 INTS9Q9NV88 658 aaKnown RBP15.42■□□□□ 0.06
COL20A1-206ENST00000479501 PITPNM2Q9BZ72 1349 aa15.42■□□□□ 0.06
COL20A1-206ENST00000479501 ZNF18P17022 549 aa15.42■□□□□ 0.06
COL20A1-206ENST00000479501 GPC5P78333 572 aa15.42■□□□□ 0.06
COL20A1-206ENST00000479501 KRT81Q14533 505 aa15.42■□□□□ 0.06
COL20A1-206ENST00000479501 SLC18A3Q16572 532 aa15.42■□□□□ 0.06
COL20A1-206ENST00000479501 RSBN1LQ6PCB5 846 aaPredicted RBP15.42■□□□□ 0.06
COL20A1-206ENST00000479501 CTAGE3PQ8IX95 158 aa15.42■□□□□ 0.06
COL20A1-206ENST00000479501 L2HGDHQ9H9P8 463 aa15.42■□□□□ 0.06
COL20A1-206ENST00000479501 PACSIN2Q9UNF0 486 aaPredicted RBP15.42■□□□□ 0.06
COL20A1-206ENST00000479501 AKT3Q9Y243 479 aa15.42■□□□□ 0.06
COL20A1-206ENST00000479501 GOLGA8SH3BPF8 625 aa15.42■□□□□ 0.06
COL20A1-206ENST00000479501 LDHAP00338 332 aaKnown RBP15.42■□□□□ 0.06
COL20A1-206ENST00000479501 CD58P19256 250 aa15.42■□□□□ 0.06
COL20A1-206ENST00000479501 SARSP49591 514 aaKnown RBP15.42■□□□□ 0.06
COL20A1-206ENST00000479501 RWDD2BP57060 319 aa15.42■□□□□ 0.06
COL20A1-206ENST00000479501 STYK1Q6J9G0 422 aa15.42■□□□□ 0.06
COL20A1-206ENST00000479501 SWSAP1Q6NVH7 229 aa15.42■□□□□ 0.06
COL20A1-206ENST00000479501 RIOX1Q9H6W3 641 aa15.42■□□□□ 0.06
COL20A1-206ENST00000479501 KIAA1586Q9HCI6 787 aa15.42■□□□□ 0.06
COL20A1-206ENST00000479501 M0QZ92 97 aa15.42■□□□□ 0.06
COL20A1-206ENST00000479501 TROVE2P10155 538 aaKnown RBP eCLIP15.42■□□□□ 0.06
COL20A1-206ENST00000479501 OSTNP61366 133 aa15.42■□□□□ 0.06
COL20A1-206ENST00000479501 RBBP5Q15291 538 aaKnown RBP15.42■□□□□ 0.06
COL20A1-206ENST00000479501 CDKAL1Q5VV42 579 aa15.42■□□□□ 0.06
COL20A1-206ENST00000479501 DPP9Q86TI2 863 aa15.42■□□□□ 0.06
COL20A1-206ENST00000479501 GSPT2Q8IYD1 628 aaKnown RBP15.42■□□□□ 0.06
COL20A1-206ENST00000479501 FBXO40Q9UH90 709 aa15.42■□□□□ 0.06
COL20A1-206ENST00000479501 LUC7L3O95232 432 aaKnown RBP15.41■□□□□ 0.06
COL20A1-206ENST00000479501 OSBPP22059 807 aa15.41■□□□□ 0.06
COL20A1-206ENST00000479501 ARL1P40616 181 aaPredicted RBP15.41■□□□□ 0.06
COL20A1-206ENST00000479501 IREB2P48200 963 aaKnown RBP15.41■□□□□ 0.06
COL20A1-206ENST00000479501 KLK7P49862 253 aa15.41■□□□□ 0.06
COL20A1-206ENST00000479501 ITIH3Q06033 890 aa15.41■□□□□ 0.06
COL20A1-206ENST00000479501 DNAJC24Q6P3W2 148 aa15.41■□□□□ 0.06
COL20A1-206ENST00000479501 CASC4Q6P4E1 433 aa15.41■□□□□ 0.06
COL20A1-206ENST00000479501 PCDHA10Q9Y5I2 948 aa15.41■□□□□ 0.06
COL20A1-206ENST00000479501 EMSYQ7Z589 1322 aa15.41■□□□□ 0.06
COL20A1-206ENST00000479501 SUN1O94901 812 aa15.41■□□□□ 0.06
COL20A1-206ENST00000479501 RASIP1Q5U651 963 aa15.41■□□□□ 0.06
COL20A1-206ENST00000479501 TTI2Q6NXR4 508 aa15.41■□□□□ 0.06
COL20A1-206ENST00000479501 CCDC13Q8IYE1 715 aa15.41■□□□□ 0.06
COL20A1-206ENST00000479501 ZDHHC15Q96MV8 337 aa15.41■□□□□ 0.06
COL20A1-206ENST00000479501 FAM213AQ9BRX8 229 aa15.41■□□□□ 0.06
COL20A1-206ENST00000479501 LRRD1A4D1F6 860 aa15.41■□□□□ 0.06
COL20A1-206ENST00000479501 UCHL3P15374 230 aa15.41■□□□□ 0.06
COL20A1-206ENST00000479501 MARK3P27448 753 aa15.41■□□□□ 0.06
COL20A1-206ENST00000479501 LPAR1Q92633 364 aa15.41■□□□□ 0.06
COL20A1-206ENST00000479501 SH2D3AQ9BRG2 576 aa15.41■□□□□ 0.06
COL20A1-206ENST00000479501 CNOT8Q9UFF9 292 aaKnown RBP15.41■□□□□ 0.06
COL20A1-206ENST00000479501 DIS3Q9Y2L1 958 aaKnown RBP15.41■□□□□ 0.06
COL20A1-206ENST00000479501 NRXN3Q9Y4C0 1643 aa15.4■□□□□ 0.06
COL20A1-206ENST00000479501 NT5DC1Q5TFE4 455 aa15.4■□□□□ 0.06
COL20A1-206ENST00000479501 KRT39Q6A163 491 aa15.4■□□□□ 0.06
COL20A1-206ENST00000479501 RPUSD2Q8IZ73 545 aaKnown RBP15.4■□□□□ 0.06
COL20A1-206ENST00000479501 SLIT3O75094 1523 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms