RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 LONRF1Q17RB8 773 aa22.9■■□□□ 1.26
SDF4-206ENST00000478938 P3H1Q32P28 736 aa22.9■■□□□ 1.26
SDF4-206ENST00000478938 HIC2Q96JB3 615 aa22.9■■□□□ 1.26
SDF4-206ENST00000478938 TRIM9Q9C026 710 aa22.9■■□□□ 1.26
SDF4-206ENST00000478938 DHX36Q9H2U1 1008 aaKnown RBP22.9■■□□□ 1.26
SDF4-206ENST00000478938 CHKBQ9Y259 395 aa22.9■■□□□ 1.26
SDF4-206ENST00000478938 DAAM1Q9Y4D1 1078 aa22.9■■□□□ 1.26
SDF4-206ENST00000478938 MARF1Q9Y4F3 1742 aaKnown RBP22.9■■□□□ 1.26
SDF4-206ENST00000478938 LMTK3Q96Q04 1460 aa22.89■■□□□ 1.26
SDF4-206ENST00000478938 TMEM94Q12767 1356 aa22.89■■□□□ 1.26
SDF4-206ENST00000478938 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.89■■□□□ 1.25
SDF4-206ENST00000478938 NPHP3-ACAD11A0A0J9YXS1 232 aa22.89■■□□□ 1.25
SDF4-206ENST00000478938 ARL6IP4Q66PJ3 421 aaKnown RBP22.89■■□□□ 1.25
SDF4-206ENST00000478938 ARHGAP18Q8N392 663 aa22.89■■□□□ 1.25
SDF4-206ENST00000478938 INPP5DQ92835 1189 aa22.89■■□□□ 1.25
SDF4-206ENST00000478938 ARHGEF2Q92974 986 aaKnown RBP22.89■■□□□ 1.25
SDF4-206ENST00000478938 HAPLN3Q96S86 360 aa22.89■■□□□ 1.25
SDF4-206ENST00000478938 KRT36O76013 467 aa22.89■■□□□ 1.25
SDF4-206ENST00000478938 TMCC1O94876 653 aa22.89■■□□□ 1.25
SDF4-206ENST00000478938 T-ENOLP0DO92 83 aa22.89■■□□□ 1.25
SDF4-206ENST00000478938 FUT4P22083 530 aa22.89■■□□□ 1.25
SDF4-206ENST00000478938 NLRP5P59047 1200 aa22.89■■□□□ 1.25
SDF4-206ENST00000478938 SETDB1Q15047 1291 aa22.89■■□□□ 1.25
SDF4-206ENST00000478938 ANKLE2Q86XL3 938 aa22.89■■□□□ 1.25
SDF4-206ENST00000478938 IP6K1Q92551 441 aa22.89■■□□□ 1.25
SDF4-206ENST00000478938 HSFX1Q9UBD0 423 aa22.89■■□□□ 1.25
SDF4-206ENST00000478938 PRKAB2O43741 272 aa22.88■■□□□ 1.25
SDF4-206ENST00000478938 GIT2Q14161 759 aa22.88■■□□□ 1.25
SDF4-206ENST00000478938 KBTBD2Q8IY47 623 aa22.88■■□□□ 1.25
SDF4-206ENST00000478938 FBXO41Q8TF61 875 aa22.88■■□□□ 1.25
SDF4-206ENST00000478938 ZNF496Q96IT1 587 aaPredicted RBP22.88■■□□□ 1.25
SDF4-206ENST00000478938 ERVK-5Q9HDB9 667 aa22.88■■□□□ 1.25
SDF4-206ENST00000478938 ARFGEF2Q9Y6D5 1785 aa22.88■■□□□ 1.25
SDF4-206ENST00000478938 LYNP07948 512 aa22.88■■□□□ 1.25
SDF4-206ENST00000478938 PLCG1P19174 1290 aa22.88■■□□□ 1.25
SDF4-206ENST00000478938 UBE3CQ15386 1083 aa22.88■■□□□ 1.25
SDF4-206ENST00000478938 MTFR1Q15390 333 aa22.88■■□□□ 1.25
SDF4-206ENST00000478938 CENPPQ6IPU0 288 aa22.88■■□□□ 1.25
SDF4-206ENST00000478938 LRRC74BQ6ZQY2 392 aa22.88■■□□□ 1.25
SDF4-206ENST00000478938 TPCN2Q8NHX9 752 aa22.88■■□□□ 1.25
SDF4-206ENST00000478938 DDX27Q96GQ7 796 aaKnown RBP22.88■■□□□ 1.25
SDF4-206ENST00000478938 ARMT1Q9H993 441 aa22.88■■□□□ 1.25
SDF4-206ENST00000478938 CNOT7Q9UIV1 285 aaKnown RBP22.88■■□□□ 1.25
SDF4-206ENST00000478938 RIPK2O43353 540 aa22.87■■□□□ 1.25
SDF4-206ENST00000478938 ECE2O60344 883 aa22.87■■□□□ 1.25
SDF4-206ENST00000478938 ATP5HO75947 161 aa22.87■■□□□ 1.25
SDF4-206ENST00000478938 VEGFAP15692 232 aaPredicted RBP22.87■■□□□ 1.25
SDF4-206ENST00000478938 POLGP54098 1239 aaPredicted RBP22.87■■□□□ 1.25
SDF4-206ENST00000478938 PRPF4BQ13523 1007 aaKnown RBP22.87■■□□□ 1.25
SDF4-206ENST00000478938 ALX1Q15699 326 aa22.87■■□□□ 1.25
SDF4-206ENST00000478938 TUBGCP5Q96RT8 1024 aa22.87■■□□□ 1.25
SDF4-206ENST00000478938 EDEM3Q9BZQ6 932 aa22.87■■□□□ 1.25
SDF4-206ENST00000478938 IQCGQ9H095 443 aaKnown RBP22.87■■□□□ 1.25
SDF4-206ENST00000478938 TMEM60Q9H2L4 133 aa22.87■■□□□ 1.25
SDF4-206ENST00000478938 COMMD3-BMI1R4GMX3 469 aa22.87■■□□□ 1.25
SDF4-206ENST00000478938 RGPD8O14715 1765 aaPredicted RBP22.87■■□□□ 1.25
SDF4-206ENST00000478938 ADCY1Q08828 1119 aa22.87■■□□□ 1.25
SDF4-206ENST00000478938 PABPC4Q13310 644 aaKnown RBP eCLIP22.87■■□□□ 1.257e-7■■■■□ 19.7
SDF4-206ENST00000478938 ACVR2BQ13705 512 aa22.87■■□□□ 1.25
SDF4-206ENST00000478938 DDB1Q16531 1140 aa22.87■■□□□ 1.25
SDF4-206ENST00000478938 BTNL9Q6UXG8 535 aa22.87■■□□□ 1.25
SDF4-206ENST00000478938 DTHD1Q6ZMT9 781 aa22.87■■□□□ 1.25
SDF4-206ENST00000478938 DTX3LQ8TDB6 740 aa22.87■■□□□ 1.25
SDF4-206ENST00000478938 LMNAP02545 664 aaKnown RBP22.86■■□□□ 1.25
SDF4-206ENST00000478938 RXRBP28702 533 aa22.86■■□□□ 1.25
SDF4-206ENST00000478938 STX2P32856 288 aa22.86■■□□□ 1.25
SDF4-206ENST00000478938 TRAPPC10P48553 1259 aa22.86■■□□□ 1.25
SDF4-206ENST00000478938 NEK3P51956 506 aa22.86■■□□□ 1.25
SDF4-206ENST00000478938 PTENP60484 403 aa22.86■■□□□ 1.25
SDF4-206ENST00000478938 LIN52Q52LA3 116 aa22.86■■□□□ 1.25
SDF4-206ENST00000478938 DSTYKQ6XUX3 929 aa22.86■■□□□ 1.25
SDF4-206ENST00000478938 TMTC2Q8N394 836 aa22.86■■□□□ 1.25
SDF4-206ENST00000478938 SH3TC2Q8TF17 1288 aa22.86■■□□□ 1.25
SDF4-206ENST00000478938 SYN2Q92777 582 aaPredicted RBP22.86■■□□□ 1.25
SDF4-206ENST00000478938 TMEM109Q9BVC6 243 aa22.86■■□□□ 1.25
SDF4-206ENST00000478938 TNKSO95271 1327 aa22.86■■□□□ 1.25
SDF4-206ENST00000478938 CAPN9O14815 690 aa22.86■■□□□ 1.25
SDF4-206ENST00000478938 KIAA0391O15091 583 aaKnown RBP22.86■■□□□ 1.25
SDF4-206ENST00000478938 CBX3Q13185 183 aa22.86■■□□□ 1.25
SDF4-206ENST00000478938 KIAA1755Q5JYT7 1200 aa22.86■■□□□ 1.25
SDF4-206ENST00000478938 OLFML2BQ68BL8 750 aa22.86■■□□□ 1.25
SDF4-206ENST00000478938 JAMLQ86YT9 394 aa22.86■■□□□ 1.25
SDF4-206ENST00000478938 ESR2Q92731 530 aa22.86■■□□□ 1.25
SDF4-206ENST00000478938 DYDC2Q96IM9 177 aa22.86■■□□□ 1.25
SDF4-206ENST00000478938 LRRC37BQ96QE4 947 aa22.86■■□□□ 1.25
SDF4-206ENST00000478938 LZTS2Q9BRK4 669 aa22.86■■□□□ 1.25
SDF4-206ENST00000478938 KANSL2Q9H9L4 492 aa22.86■■□□□ 1.25
SDF4-206ENST00000478938 GRHL1Q9NZI5 618 aa22.86■■□□□ 1.25
SDF4-206ENST00000478938 AIPL1Q9NZN9 384 aa22.86■■□□□ 1.25
SDF4-206ENST00000478938 NFAT5O94916 1531 aa22.86■■□□□ 1.25
SDF4-206ENST00000478938 TCRBV5S4A2TA0A5A2 114 aa22.85■■□□□ 1.25
SDF4-206ENST00000478938 A6NJR5 290 aa22.85■■□□□ 1.25
SDF4-206ENST00000478938 ASIC2Q16515 512 aa22.85■■□□□ 1.25
SDF4-206ENST00000478938 WDR72Q3MJ13 1102 aa22.85■■□□□ 1.25
SDF4-206ENST00000478938 SMC1BQ8NDV3 1235 aa22.85■■□□□ 1.25
SDF4-206ENST00000478938 NT5C3AQ9H0P0 336 aa22.85■■□□□ 1.25
SDF4-206ENST00000478938 PFASO15067 1338 aa22.85■■□□□ 1.25
SDF4-206ENST00000478938 ASLP04424 464 aa22.85■■□□□ 1.25
SDF4-206ENST00000478938 TNIP1Q15025 636 aa22.85■■□□□ 1.25
SDF4-206ENST00000478938 MFSD5Q6N075 450 aa22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms