RNA–Protein interactions for RNA: ENST00000478603.5

C9orf3-216, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-216ENST00000478603 TMEM161AQ9NX61 479 aa25.68■■□□□ 1.7
C9orf3-216ENST00000478603 RAPGEFL1Q9UHV5 662 aa25.68■■□□□ 1.7
C9orf3-216ENST00000478603 EML1O00423 815 aa25.67■■□□□ 1.7
C9orf3-216ENST00000478603 XBP1P17861 261 aa25.67■■□□□ 1.7
C9orf3-216ENST00000478603 CLUL1Q15846 466 aa25.67■■□□□ 1.7
C9orf3-216ENST00000478603 CTC1Q2NKJ3 1217 aa25.67■■□□□ 1.7
C9orf3-216ENST00000478603 PIK3AP1Q6ZUJ8 805 aa25.67■■□□□ 1.7
C9orf3-216ENST00000478603 NEK8Q86SG6 692 aa25.67■■□□□ 1.7
C9orf3-216ENST00000478603 NECAB1Q8N987 351 aa25.67■■□□□ 1.7
C9orf3-216ENST00000478603 RNF216Q9NWF9 866 aaPredicted RBP25.67■■□□□ 1.7
C9orf3-216ENST00000478603 ORC3Q9UBD5 711 aaPredicted RBP25.67■■□□□ 1.7
C9orf3-216ENST00000478603 LINC01565O15544 149 aa25.66■■□□□ 1.7
C9orf3-216ENST00000478603 NCK2O43639 380 aa25.66■■□□□ 1.7
C9orf3-216ENST00000478603 CSDE1O75534 798 aaKnown RBP25.66■■□□□ 1.7
C9orf3-216ENST00000478603 LARGE1O95461 756 aa25.66■■□□□ 1.7
C9orf3-216ENST00000478603 DARSP14868 501 aaKnown RBP25.66■■□□□ 1.7
C9orf3-216ENST00000478603 PUS10Q3MIT2 529 aaKnown RBP25.66■■□□□ 1.7
C9orf3-216ENST00000478603 EARS2Q5JPH6 523 aaKnown RBP25.66■■□□□ 1.7
C9orf3-216ENST00000478603 ADGRD2Q7Z7M1 963 aa25.66■■□□□ 1.7
C9orf3-216ENST00000478603 NLRP7Q8WX94 980 aa25.66■■□□□ 1.7
C9orf3-216ENST00000478603 ELAC1Q9H777 363 aaKnown RBP25.66■■□□□ 1.7
C9orf3-216ENST00000478603 TYW1Q9NV66 732 aaKnown RBP25.66■■□□□ 1.7
C9orf3-216ENST00000478603 PCDHGC5Q9Y5F6 944 aa25.66■■□□□ 1.7
C9orf3-216ENST00000478603 DDX11L8A8MPP1 907 aa25.65■■□□□ 1.7
C9orf3-216ENST00000478603 ZSCAN20P17040 1043 aaPredicted RBP25.65■■□□□ 1.7
C9orf3-216ENST00000478603 ANKRD1Q15327 319 aa25.65■■□□□ 1.7
C9orf3-216ENST00000478603 GJD3Q8N144 294 aa25.65■■□□□ 1.7
C9orf3-216ENST00000478603 ZNF710Q8N1W2 664 aa25.65■■□□□ 1.7
C9orf3-216ENST00000478603 C1QTNF1Q9BXJ1 281 aa25.65■■□□□ 1.7
C9orf3-216ENST00000478603 KCNMB3Q9NPA1 279 aa25.65■■□□□ 1.7
C9orf3-216ENST00000478603 RNF19AQ9NV58 838 aa25.65■■□□□ 1.7
C9orf3-216ENST00000478603 VAV3Q9UKW4 847 aa25.65■■□□□ 1.7
C9orf3-216ENST00000478603 PCDHB12Q9Y5F1 795 aa25.65■■□□□ 1.7
C9orf3-216ENST00000478603 FAM205CA6NFA0 338 aa25.64■■□□□ 1.7
C9orf3-216ENST00000478603 CCNT1O60563 726 aaKnown RBP25.64■■□□□ 1.7
C9orf3-216ENST00000478603 TBX10O75333 385 aa25.64■■□□□ 1.7
C9orf3-216ENST00000478603 FDPSP14324 419 aaKnown RBP25.64■■□□□ 1.7
C9orf3-216ENST00000478603 SSTR3P32745 418 aaPredicted RBP25.64■■□□□ 1.7
C9orf3-216ENST00000478603 PSMC5P62195 406 aa25.64■■□□□ 1.7
C9orf3-216ENST00000478603 ME3Q16798 604 aa25.64■■□□□ 1.7
C9orf3-216ENST00000478603 ERICH6BQ5W0A0 696 aa25.64■■□□□ 1.7
C9orf3-216ENST00000478603 PLA2G4FQ68DD2 849 aa25.64■■□□□ 1.7
C9orf3-216ENST00000478603 CWH43Q9H720 699 aa25.64■■□□□ 1.7
C9orf3-216ENST00000478603 IGKV6-21A0A0C4DH24 114 aa25.63■■□□□ 1.69
C9orf3-216ENST00000478603 PPP2R5CQ13362 524 aa25.63■■□□□ 1.69
C9orf3-216ENST00000478603 PPP4R3AQ6IN85 833 aa25.63■■□□□ 1.69
C9orf3-216ENST00000478603 ANO5Q75V66 913 aa25.63■■□□□ 1.69
C9orf3-216ENST00000478603 ECHDC2Q86YB7 292 aa25.63■■□□□ 1.69
C9orf3-216ENST00000478603 COLGALT1Q8NBJ5 622 aa25.63■■□□□ 1.69
C9orf3-216ENST00000478603 FAM20AQ96MK3 541 aa25.63■■□□□ 1.69
C9orf3-216ENST00000478603 CASD1Q96PB1 797 aa25.63■■□□□ 1.69
C9orf3-216ENST00000478603 AAASQ9NRG9 546 aa25.63■■□□□ 1.69
C9orf3-216ENST00000478603 GCFC2P16383 781 aaKnown RBP25.62■■□□□ 1.69
C9orf3-216ENST00000478603 NR5A1Q13285 461 aa25.62■■□□□ 1.69
C9orf3-216ENST00000478603 ADAM15Q13444 863 aa25.62■■□□□ 1.69
C9orf3-216ENST00000478603 LRRC55Q6ZSA7 311 aa25.62■■□□□ 1.69
C9orf3-216ENST00000478603 RBM23Q86U06 439 aaKnown RBP25.62■■□□□ 1.69
C9orf3-216ENST00000478603 POTEDQ86YR6 584 aa25.62■■□□□ 1.69
C9orf3-216ENST00000478603 THNSL1Q8IYQ7 743 aa25.62■■□□□ 1.69
C9orf3-216ENST00000478603 RNF169Q8NCN4 708 aa25.62■■□□□ 1.69
C9orf3-216ENST00000478603 HAS1Q92839 578 aa25.62■■□□□ 1.69
C9orf3-216ENST00000478603 GTF3C6Q969F1 213 aa25.62■■□□□ 1.69
C9orf3-216ENST00000478603 TMEM117Q9H0C3 514 aa25.62■■□□□ 1.69
C9orf3-216ENST00000478603 A0A087WZ62 844 aa25.61■■□□□ 1.69
C9orf3-216ENST00000478603 MAFO75444 373 aaPredicted RBP25.61■■□□□ 1.69
C9orf3-216ENST00000478603 FGF18O76093 207 aa25.61■■□□□ 1.69
C9orf3-216ENST00000478603 NRIP1P48552 1158 aa25.61■■□□□ 1.69
C9orf3-216ENST00000478603 WASF1Q92558 559 aa25.61■■□□□ 1.69
C9orf3-216ENST00000478603 PPP2R3CQ969Q6 453 aa25.61■■□□□ 1.69
C9orf3-216ENST00000478603 FDXACB1Q9BRP7 624 aaPredicted RBP25.61■■□□□ 1.69
C9orf3-216ENST00000478603 GCOM2Q9BZD3 368 aaPredicted RBP25.61■■□□□ 1.69
C9orf3-216ENST00000478603 SUCLA2Q9P2R7 463 aaPredicted RBP25.61■■□□□ 1.69
C9orf3-216ENST00000478603 WRAP73Q9P2S5 460 aaPredicted RBP25.61■■□□□ 1.69
C9orf3-216ENST00000478603 FAM50BQ9Y247 325 aa25.61■■□□□ 1.69
C9orf3-216ENST00000478603 KRT2P35908 639 aa25.6■■□□□ 1.69
C9orf3-216ENST00000478603 QARSP47897 775 aaKnown RBP25.6■■□□□ 1.69
C9orf3-216ENST00000478603 NDUFV1P49821 464 aa25.6■■□□□ 1.69
C9orf3-216ENST00000478603 DNM2P50570 870 aa25.6■■□□□ 1.69
C9orf3-216ENST00000478603 FOSBP53539 338 aa25.6■■□□□ 1.69
C9orf3-216ENST00000478603 NPEPPSP55786 919 aa25.6■■□□□ 1.69
C9orf3-216ENST00000478603 RHPN2Q8IUC4 686 aa25.6■■□□□ 1.69
C9orf3-216ENST00000478603 KSR1Q8IVT5 923 aa25.6■■□□□ 1.69
C9orf3-216ENST00000478603 ZNF579Q8NAF0 562 aaKnown RBP25.6■■□□□ 1.69
C9orf3-216ENST00000478603 MICAL1Q8TDZ2 1067 aa25.6■■□□□ 1.69
C9orf3-216ENST00000478603 HOXA2O43364 376 aa25.59■■□□□ 1.69
C9orf3-216ENST00000478603 MBTPS2O43462 519 aa25.59■■□□□ 1.69
C9orf3-216ENST00000478603 MARCH6O60337 910 aa25.59■■□□□ 1.69
C9orf3-216ENST00000478603 SEC24BO95487 1268 aa25.59■■□□□ 1.69
C9orf3-216ENST00000478603 LAG3P18627 525 aa25.59■■□□□ 1.69
C9orf3-216ENST00000478603 NEK4P51957 841 aa25.59■■□□□ 1.69
C9orf3-216ENST00000478603 CLLU1OSQ5K130 101 aa25.59■■□□□ 1.69
C9orf3-216ENST00000478603 ABI1Q8IZP0 508 aa25.59■■□□□ 1.69
C9orf3-216ENST00000478603 NSUN7Q8NE18 718 aaKnown RBP25.59■■□□□ 1.69
C9orf3-216ENST00000478603 TNFRSF25Q93038 417 aa25.59■■□□□ 1.69
C9orf3-216ENST00000478603 LRFN3Q9BTN0 628 aa25.59■■□□□ 1.69
C9orf3-216ENST00000478603 CYP26B1Q9NR63 512 aa25.59■■□□□ 1.69
C9orf3-216ENST00000478603 TLR9Q9NR96 1032 aa25.59■■□□□ 1.69
C9orf3-216ENST00000478603 A0A0U1RQF3 1178 aa25.58■■□□□ 1.69
C9orf3-216ENST00000478603 FAM86C2PA6NEL3 165 aa25.58■■□□□ 1.69
C9orf3-216ENST00000478603 PI4K2BG5E9Z4 385 aa25.58■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms