RNA–Protein interactions for RNA: ENST00000478469.5

PCCB-214, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 1 (best) BASIC

Gene PCCB, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-214ENST00000478469 CNTN2Q02246 1040 aa13.03□□□□□ -0.32
PCCB-214ENST00000478469 RINT1Q6NUQ1 792 aa13.03□□□□□ -0.32
PCCB-214ENST00000478469 SMC1BQ8NDV3 1235 aa13.03□□□□□ -0.32
PCCB-214ENST00000478469 AMFRQ9UKV5 643 aa13.03□□□□□ -0.32
PCCB-214ENST00000478469 LPXNO60711 386 aa13.03□□□□□ -0.32
PCCB-214ENST00000478469 PRKCBP05771 671 aa13.03□□□□□ -0.32
PCCB-214ENST00000478469 ZNF667Q5HYK9 610 aa13.03□□□□□ -0.32
PCCB-214ENST00000478469 RIOX2Q8IUF8 465 aa13.03□□□□□ -0.32
PCCB-214ENST00000478469 AGO4Q9HCK5 861 aaKnown RBP13.03□□□□□ -0.32
PCCB-214ENST00000478469 XIRP1Q702N8 1843 aaKnown RBP13.03□□□□□ -0.32
PCCB-214ENST00000478469 ITGB4P16144 1822 aa13.03□□□□□ -0.32
PCCB-214ENST00000478469 SPDYE5A6NIY4 337 aa13.03□□□□□ -0.32
PCCB-214ENST00000478469 ASAP2O43150 1006 aa13.03□□□□□ -0.32
PCCB-214ENST00000478469 DHX40Q8IX18 779 aaKnown RBP13.03□□□□□ -0.32
PCCB-214ENST00000478469 NACA2Q9H009 215 aa13.03□□□□□ -0.32
PCCB-214ENST00000478469 DNAJC18Q9H819 358 aa13.03□□□□□ -0.32
PCCB-214ENST00000478469 KBTBD4Q9NVX7 518 aa13.03□□□□□ -0.32
PCCB-214ENST00000478469 PLA2G6O60733 806 aa13.03□□□□□ -0.32
PCCB-214ENST00000478469 SUPT20HL2P0C7V6 817 aa13.03□□□□□ -0.32
PCCB-214ENST00000478469 CD58P19256 250 aa13.03□□□□□ -0.32
PCCB-214ENST00000478469 IER5Q5VY09 327 aa13.03□□□□□ -0.32
PCCB-214ENST00000478469 ZNF771Q7L3S4 317 aaPredicted RBP13.03□□□□□ -0.32
PCCB-214ENST00000478469 DAAM2Q86T65 1068 aa13.03□□□□□ -0.32
PCCB-214ENST00000478469 SNX25Q9H3E2 840 aa13.03□□□□□ -0.32
PCCB-214ENST00000478469 ARFGAP3Q9NP61 516 aa13.03□□□□□ -0.32
PCCB-214ENST00000478469 ARHGEF37A1IGU5 675 aa13.02□□□□□ -0.32
PCCB-214ENST00000478469 SPDYE16A6NNV3 312 aaPredicted RBP13.02□□□□□ -0.32
PCCB-214ENST00000478469 MEIS2O14770 477 aa13.02□□□□□ -0.32
PCCB-214ENST00000478469 THAP12O43422 761 aa13.02□□□□□ -0.32
PCCB-214ENST00000478469 ALDH5A1P51649 535 aaPredicted RBP13.02□□□□□ -0.32
PCCB-214ENST00000478469 FMR1Q06787 632 aaKnown RBP eCLIP13.02□□□□□ -0.324e-13■■■■■ 26.9
PCCB-214ENST00000478469 IQCB1Q15051 598 aa13.02□□□□□ -0.32
PCCB-214ENST00000478469 METTL7BQ6UX53 244 aa13.02□□□□□ -0.32
PCCB-214ENST00000478469 NIPA1Q7RTP0 329 aa13.02□□□□□ -0.32
PCCB-214ENST00000478469 GPD1LQ8N335 351 aa13.02□□□□□ -0.32
PCCB-214ENST00000478469 CCDC113Q9H0I3 377 aa13.02□□□□□ -0.32
PCCB-214ENST00000478469 BTAF1O14981 1849 aa13.02□□□□□ -0.32
PCCB-214ENST00000478469 COL1A1P02452 1464 aaPredicted RBP13.02□□□□□ -0.33
PCCB-214ENST00000478469 USP2O75604 605 aaPredicted RBP13.02□□□□□ -0.33
PCCB-214ENST00000478469 CPT1AP50416 773 aa13.02□□□□□ -0.33
PCCB-214ENST00000478469 RGMBQ6NW40 437 aa13.02□□□□□ -0.33
PCCB-214ENST00000478469 GMLQ99445 158 aa13.02□□□□□ -0.33
PCCB-214ENST00000478469 RBAKQ9NYW8 714 aaPredicted RBP13.02□□□□□ -0.33
PCCB-214ENST00000478469 KIAA0391O15091 583 aaKnown RBP13.02□□□□□ -0.33
PCCB-214ENST00000478469 RHOXF2BP0C7M4 288 aa13.02□□□□□ -0.33
PCCB-214ENST00000478469 ADORA2AP29274 412 aa13.02□□□□□ -0.33
PCCB-214ENST00000478469 EDRF1Q3B7T1 1238 aa13.02□□□□□ -0.33
PCCB-214ENST00000478469 FRMD5Q7Z6J6 570 aa13.02□□□□□ -0.33
PCCB-214ENST00000478469 CCDC170Q8IYT3 715 aa13.02□□□□□ -0.33
PCCB-214ENST00000478469 LRRC71Q8N4P6 559 aa13.02□□□□□ -0.33
PCCB-214ENST00000478469 CCDC26Q8TAB7 109 aa13.02□□□□□ -0.33
PCCB-214ENST00000478469 PANX2Q96RD6 677 aa13.02□□□□□ -0.33
PCCB-214ENST00000478469 RHOXF2Q9BQY4 288 aa13.02□□□□□ -0.33
PCCB-214ENST00000478469 DNAJC12Q9UKB3 198 aa13.02□□□□□ -0.33
PCCB-214ENST00000478469 BUB1O43683 1085 aa13.01□□□□□ -0.33
PCCB-214ENST00000478469 MFAP3LO75121 409 aa13.01□□□□□ -0.33
PCCB-214ENST00000478469 TUBBP07437 444 aa13.01□□□□□ -0.33
PCCB-214ENST00000478469 TRIM49P0CI25 452 aa13.01□□□□□ -0.33
PCCB-214ENST00000478469 TRIM49CP0CI26 452 aa13.01□□□□□ -0.33
PCCB-214ENST00000478469 BMS1Q14692 1282 aaKnown RBP13.01□□□□□ -0.33
PCCB-214ENST00000478469 PPP1R7Q15435 360 aa13.01□□□□□ -0.33
PCCB-214ENST00000478469 KRT39Q6A163 491 aa13.01□□□□□ -0.33
PCCB-214ENST00000478469 EFCAB12Q6NXP0 572 aa13.01□□□□□ -0.33
PCCB-214ENST00000478469 METTL23Q86XA0 190 aa13.01□□□□□ -0.33
PCCB-214ENST00000478469 LRRC45Q96CN5 670 aa13.01□□□□□ -0.33
PCCB-214ENST00000478469 C17orf75Q9HAS0 396 aa13.01□□□□□ -0.33
PCCB-214ENST00000478469 CYP26B1Q9NR63 512 aa13.01□□□□□ -0.33
PCCB-214ENST00000478469 RRN3P2A6NIE6 340 aa13.01□□□□□ -0.33
PCCB-214ENST00000478469 PIK3CDO00329 1044 aa13.01□□□□□ -0.33
PCCB-214ENST00000478469 MYBP10242 640 aa13.01□□□□□ -0.33
PCCB-214ENST00000478469 CYP2C9P11712 490 aa13.01□□□□□ -0.33
PCCB-214ENST00000478469 YY1P25490 414 aa13.01□□□□□ -0.33
PCCB-214ENST00000478469 EIF4A3P38919 411 aaKnown RBP13.01□□□□□ -0.33
PCCB-214ENST00000478469 VAV2P52735 878 aa13.01□□□□□ -0.33
PCCB-214ENST00000478469 DGKZQ13574 1117 aa13.01□□□□□ -0.33
PCCB-214ENST00000478469 ZC2HC1CQ53FD0 456 aaPredicted RBP13.01□□□□□ -0.33
PCCB-214ENST00000478469 CCDC114Q96M63 670 aa13.01□□□□□ -0.33
PCCB-214ENST00000478469 PYCARDQ9ULZ3 195 aa13.01□□□□□ -0.33
PCCB-214ENST00000478469 ATRNL1Q5VV63 1379 aa13.01□□□□□ -0.33
PCCB-214ENST00000478469 DYNC1I1O14576 645 aa13.01□□□□□ -0.33
PCCB-214ENST00000478469 CAPN9O14815 690 aa13.01□□□□□ -0.33
PCCB-214ENST00000478469 ATP2A1O14983 1001 aa13.01□□□□□ -0.33
PCCB-214ENST00000478469 TEX33O43247 280 aa13.01□□□□□ -0.33
PCCB-214ENST00000478469 DAPK3O43293 454 aa13.01□□□□□ -0.33
PCCB-214ENST00000478469 GAS2O43903 313 aaKnown RBP13.01□□□□□ -0.33
PCCB-214ENST00000478469 EGFRP00533 1210 aa13.01□□□□□ -0.33
PCCB-214ENST00000478469 SERPING1P05155 500 aa13.01□□□□□ -0.33
PCCB-214ENST00000478469 CYP3A4P08684 503 aa13.01□□□□□ -0.33
PCCB-214ENST00000478469 CCDC117Q8IWD4 279 aaPredicted RBP13.01□□□□□ -0.33
PCCB-214ENST00000478469 CARD6Q9BX69 1037 aa13.01□□□□□ -0.33
PCCB-214ENST00000478469 ABHD16BQ9H3Z7 469 aa13.01□□□□□ -0.33
PCCB-214ENST00000478469 SAR1BQ9Y6B6 198 aa13.01□□□□□ -0.33
PCCB-214ENST00000478469 TMEM132BQ14DG7 1078 aa13.01□□□□□ -0.33
PCCB-214ENST00000478469 SCARA5Q6ZMJ2 495 aa13.01□□□□□ -0.33
PCCB-214ENST00000478469 C4orf19Q8IY42 314 aa13.01□□□□□ -0.33
PCCB-214ENST00000478469 ADAMTS1Q9UHI8 967 aa13.01□□□□□ -0.33
PCCB-214ENST00000478469 SPEF2Q9C093 1822 aa13.01□□□□□ -0.33
PCCB-214ENST00000478469 IGSF9BQ9UPX0 1349 aa13□□□□□ -0.33
PCCB-214ENST00000478469 MYO1FO00160 1098 aa13□□□□□ -0.33
PCCB-214ENST00000478469 GPC3P51654 580 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms