RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 GAB4Q2WGN9 574 aa5.69□□□□□ -1.5
CKS1B-207ENST00000477676 RASIP1Q5U651 963 aa5.69□□□□□ -1.5
CKS1B-207ENST00000477676 SPPL2CQ8IUH8 684 aa5.69□□□□□ -1.5
CKS1B-207ENST00000477676 SLC17A8Q8NDX2 589 aa5.69□□□□□ -1.5
CKS1B-207ENST00000477676 DACT3Q96B18 629 aaPredicted RBP5.69□□□□□ -1.5
CKS1B-207ENST00000477676 HOOK2Q96ED9 719 aa5.69□□□□□ -1.5
CKS1B-207ENST00000477676 HTATIP2Q9BUP3 242 aa5.69□□□□□ -1.5
CKS1B-207ENST00000477676 DUSP15Q9H1R2 295 aaPredicted RBP5.69□□□□□ -1.5
CKS1B-207ENST00000477676 ZMYND8Q9ULU4 1186 aaPredicted RBP5.69□□□□□ -1.5
CKS1B-207ENST00000477676 A0A1W2PPC1 479 aa5.68□□□□□ -1.5
CKS1B-207ENST00000477676 TRIM75PA6NK02 468 aa5.68□□□□□ -1.5
CKS1B-207ENST00000477676 ENTPD3O75355 529 aa5.68□□□□□ -1.5
CKS1B-207ENST00000477676 TFRCP02786 760 aaKnown RBP5.68□□□□□ -1.5
CKS1B-207ENST00000477676 TIMM10P62072 90 aa5.68□□□□□ -1.5
CKS1B-207ENST00000477676 RASGRF1Q13972 1273 aa5.68□□□□□ -1.5
CKS1B-207ENST00000477676 NR0B2Q15466 257 aa5.68□□□□□ -1.5
CKS1B-207ENST00000477676 AGMOQ6ZNB7 445 aa5.68□□□□□ -1.5
CKS1B-207ENST00000477676 FASTKD5Q7L8L6 764 aaKnown RBP5.68□□□□□ -1.5
CKS1B-207ENST00000477676 MCATQ8IVS2 390 aaKnown RBP5.68□□□□□ -1.5
CKS1B-207ENST00000477676 ANKRD13CQ8N6S4 541 aa5.68□□□□□ -1.5
CKS1B-207ENST00000477676 GAL3ST3Q96A11 431 aa5.68□□□□□ -1.5
CKS1B-207ENST00000477676 TMEM87BQ96K49 555 aa5.68□□□□□ -1.5
CKS1B-207ENST00000477676 TRAIPQ9BWF2 469 aa5.68□□□□□ -1.5
CKS1B-207ENST00000477676 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.68□□□□□ -1.5
CKS1B-207ENST00000477676 ASCC2Q9H1I8 757 aaPredicted RBP5.68□□□□□ -1.5
CKS1B-207ENST00000477676 DUSP13Q9UII6 198 aa5.68□□□□□ -1.5
CKS1B-207ENST00000477676 CEP131Q9UPN4 1083 aa5.68□□□□□ -1.5
CKS1B-207ENST00000477676 AGTPBP1Q9UPW5 1226 aa5.68□□□□□ -1.5
CKS1B-207ENST00000477676 SLC45A1Q9Y2W3 748 aa5.68□□□□□ -1.5
CKS1B-207ENST00000477676 NR2E3Q9Y5X4 410 aa5.68□□□□□ -1.5
CKS1B-207ENST00000477676 AK5Q9Y6K8 562 aa5.68□□□□□ -1.5
CKS1B-207ENST00000477676 IVNS1ABPQ9Y6Y0 642 aa5.68□□□□□ -1.5
CKS1B-207ENST00000477676 COL11A1P12107 1806 aaPredicted RBP5.68□□□□□ -1.5
CKS1B-207ENST00000477676 PFASO15067 1338 aa5.68□□□□□ -1.5
CKS1B-207ENST00000477676 PTPRCP08575 1304 aa5.68□□□□□ -1.5
CKS1B-207ENST00000477676 MYH8P13535 1937 aa5.68□□□□□ -1.5
CKS1B-207ENST00000477676 PLXNA1Q9UIW2 1896 aa5.67□□□□□ -1.5
CKS1B-207ENST00000477676 COL2A1P02458 1487 aaPredicted RBP5.67□□□□□ -1.5
CKS1B-207ENST00000477676 GPR75-ASB3A0A0A6YYF3 556 aa5.67□□□□□ -1.5
CKS1B-207ENST00000477676 FITM1A5D6W6 292 aa5.67□□□□□ -1.5
CKS1B-207ENST00000477676 TNPO2O14787 897 aaKnown RBP5.67□□□□□ -1.5
CKS1B-207ENST00000477676 CTNND1O60716 968 aaKnown RBP5.67□□□□□ -1.5
CKS1B-207ENST00000477676 CIAO1O76071 339 aa5.67□□□□□ -1.5
CKS1B-207ENST00000477676 INSRRP14616 1297 aa5.67□□□□□ -1.5
CKS1B-207ENST00000477676 BMP8BP34820 402 aa5.67□□□□□ -1.5
CKS1B-207ENST00000477676 BTDP43251 543 aa5.67□□□□□ -1.5
CKS1B-207ENST00000477676 MAGEA10P43363 369 aaPredicted RBP5.67□□□□□ -1.5
CKS1B-207ENST00000477676 AFF3P51826 1226 aaKnown RBP5.67□□□□□ -1.5
CKS1B-207ENST00000477676 RPL6Q02878 288 aaKnown RBP5.67□□□□□ -1.5
CKS1B-207ENST00000477676 MECOMQ03112 1051 aa5.67□□□□□ -1.5
CKS1B-207ENST00000477676 PTPN11Q06124 597 aaPredicted RBP5.67□□□□□ -1.5
CKS1B-207ENST00000477676 SPP2Q13103 211 aa5.67□□□□□ -1.5
CKS1B-207ENST00000477676 DUSP4Q13115 394 aa5.67□□□□□ -1.5
CKS1B-207ENST00000477676 PICALMQ13492 652 aa5.67□□□□□ -1.5
CKS1B-207ENST00000477676 FAM110CQ1W6H9 321 aa5.67□□□□□ -1.5
CKS1B-207ENST00000477676 MAP3K21Q5TCX8 1036 aa5.67□□□□□ -1.5
CKS1B-207ENST00000477676 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.67□□□□□ -1.5
CKS1B-207ENST00000477676 C7orf61Q8IZ16 206 aa5.67□□□□□ -1.5
CKS1B-207ENST00000477676 FAM9BQ8IZU0 186 aa5.67□□□□□ -1.5
CKS1B-207ENST00000477676 TRIB2Q92519 343 aa5.67□□□□□ -1.5
CKS1B-207ENST00000477676 SIGLEC10Q96LC7 697 aa5.67□□□□□ -1.5
CKS1B-207ENST00000477676 DNAJC18Q9H819 358 aa5.67□□□□□ -1.5
CKS1B-207ENST00000477676 TXNRD2Q9NNW7 524 aa5.67□□□□□ -1.5
CKS1B-207ENST00000477676 MTMR10Q9NXD2 777 aa5.67□□□□□ -1.5
CKS1B-207ENST00000477676 DENND2AQ9ULE3 1009 aa5.67□□□□□ -1.5
CKS1B-207ENST00000477676 LRRFIP2Q9Y608 721 aaKnown RBP5.67□□□□□ -1.5
CKS1B-207ENST00000477676 IRAK3Q9Y616 596 aa5.67□□□□□ -1.5
CKS1B-207ENST00000477676 MCM3APO60318 1980 aa5.67□□□□□ -1.5
CKS1B-207ENST00000477676 MROH7-TTC4A0A0A0MT08 1334 aa5.67□□□□□ -1.5
CKS1B-207ENST00000477676 BAZ2AQ9UIF9 1905 aaKnown RBP5.66□□□□□ -1.5
CKS1B-207ENST00000477676 GFRA2O00451 464 aa5.66□□□□□ -1.5
CKS1B-207ENST00000477676 P4HBP07237 508 aaKnown RBP5.66□□□□□ -1.5
CKS1B-207ENST00000477676 COL6A1P12109 1028 aa5.66□□□□□ -1.5
CKS1B-207ENST00000477676 ZEB1P37275 1124 aaPredicted RBP5.66□□□□□ -1.5
CKS1B-207ENST00000477676 LIG3P49916 1009 aa5.66□□□□□ -1.5
CKS1B-207ENST00000477676 HMGCS2P54868 508 aa5.66□□□□□ -1.5
CKS1B-207ENST00000477676 CHRNEQ04844 493 aa5.66□□□□□ -1.5
CKS1B-207ENST00000477676 EGR3Q06889 387 aa5.66□□□□□ -1.5
CKS1B-207ENST00000477676 SLFN5Q08AF3 891 aa5.66□□□□□ -1.5
CKS1B-207ENST00000477676 EFEMP1Q12805 493 aa5.66□□□□□ -1.5
CKS1B-207ENST00000477676 CCL14Q16627 93 aa5.66□□□□□ -1.5
CKS1B-207ENST00000477676 VMACQ2NL98 169 aa5.66□□□□□ -1.5
CKS1B-207ENST00000477676 SPATS1Q496A3 300 aa5.66□□□□□ -1.5
CKS1B-207ENST00000477676 NECAB2Q7Z6G3 386 aa5.66□□□□□ -1.5
CKS1B-207ENST00000477676 TRMT2AQ8IZ69 625 aaKnown RBP5.66□□□□□ -1.5
CKS1B-207ENST00000477676 DEFB123Q8N688 67 aa5.66□□□□□ -1.5
CKS1B-207ENST00000477676 SMCR8Q8TEV9 937 aaPredicted RBP5.66□□□□□ -1.5
CKS1B-207ENST00000477676 USP6NLQ92738 828 aa5.66□□□□□ -1.5
CKS1B-207ENST00000477676 NSUN4Q96CB9 384 aaKnown RBP5.66□□□□□ -1.5
CKS1B-207ENST00000477676 MEIS3Q99687 375 aa5.66□□□□□ -1.5
CKS1B-207ENST00000477676 DPH2Q9BQC3 489 aaPredicted RBP5.66□□□□□ -1.5
CKS1B-207ENST00000477676 COPRSQ9NQ92 184 aa5.66□□□□□ -1.5
CKS1B-207ENST00000477676 HMG20BQ9P0W2 317 aa5.66□□□□□ -1.5
CKS1B-207ENST00000477676 ABCF2Q9UG63 623 aa5.66□□□□□ -1.5
CKS1B-207ENST00000477676 OGDHLQ9ULD0 1010 aa5.66□□□□□ -1.5
CKS1B-207ENST00000477676 TNNQ9UQP3 1299 aa5.66□□□□□ -1.5
CKS1B-207ENST00000477676 PDS5AQ29RF7 1337 aaKnown RBP5.66□□□□□ -1.5
CKS1B-207ENST00000477676 GBF1Q92538 1859 aa5.65□□□□□ -1.5
CKS1B-207ENST00000477676 A0A1B0GUL7 405 aa5.65□□□□□ -1.5
CKS1B-207ENST00000477676 SLC22A31A6NKX4 558 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms