RNA–Protein interactions for RNA: ENST00000477508.1

TOP3A-205, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-205ENST00000477508 NLRP11P59045 1033 aaKnown RBP14.59□□□□□ -0.07
TOP3A-205ENST00000477508 TMEM62Q0P6H9 643 aa14.59□□□□□ -0.07
TOP3A-205ENST00000477508 GRB10Q13322 594 aa14.59□□□□□ -0.07
TOP3A-205ENST00000477508 IKBKEQ14164 716 aa14.59□□□□□ -0.07
TOP3A-205ENST00000477508 GPNMBQ14956 572 aa14.59□□□□□ -0.07
TOP3A-205ENST00000477508 FBXO47Q5MNV8 452 aa14.59□□□□□ -0.07
TOP3A-205ENST00000477508 PADI6Q6TGC4 694 aa14.59□□□□□ -0.07
TOP3A-205ENST00000477508 CCDC73Q6ZRK6 1079 aa14.59□□□□□ -0.07
TOP3A-205ENST00000477508 TSHZ1Q6ZSZ6 1077 aa14.59□□□□□ -0.07
TOP3A-205ENST00000477508 ZNF365Q70YC5 407 aa14.59□□□□□ -0.07
TOP3A-205ENST00000477508 C16orf59Q7L2K0 433 aa14.59□□□□□ -0.07
TOP3A-205ENST00000477508 IFNLR1Q8IU57 520 aaPredicted RBP14.59□□□□□ -0.07
TOP3A-205ENST00000477508 HERVK_113Q902F9 699 aa14.59□□□□□ -0.07
TOP3A-205ENST00000477508 SYMPKQ92797 1274 aaKnown RBP14.59□□□□□ -0.07
TOP3A-205ENST00000477508 SPATA32Q96LK8 384 aa14.59□□□□□ -0.07
TOP3A-205ENST00000477508 CLIC6Q96NY7 704 aa14.59□□□□□ -0.07
TOP3A-205ENST00000477508 PNMA5Q96PV4 448 aa14.59□□□□□ -0.07
TOP3A-205ENST00000477508 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.59□□□□□ -0.073e-6■■■□□ 15.1
TOP3A-205ENST00000477508 TIPINQ9BVW5 301 aa14.59□□□□□ -0.07
TOP3A-205ENST00000477508 INO80BQ9C086 356 aaPredicted RBP14.59□□□□□ -0.07
TOP3A-205ENST00000477508 KCND2Q9NZV8 630 aa14.59□□□□□ -0.07
TOP3A-205ENST00000477508 COLQQ9Y215 455 aaPredicted RBP14.59□□□□□ -0.07
TOP3A-205ENST00000477508 SCN5AQ14524 2016 aa14.58□□□□□ -0.08
TOP3A-205ENST00000477508 A0A087WWV3 80 aa14.58□□□□□ -0.08
TOP3A-205ENST00000477508 USO1O60763 962 aaKnown RBP14.58□□□□□ -0.08
TOP3A-205ENST00000477508 ACRP10323 421 aa14.58□□□□□ -0.08
TOP3A-205ENST00000477508 EIF4BP23588 611 aaKnown RBP14.58□□□□□ -0.08
TOP3A-205ENST00000477508 GPC3P51654 580 aa14.58□□□□□ -0.08
TOP3A-205ENST00000477508 POU5F1BQ06416 359 aa14.58□□□□□ -0.08
TOP3A-205ENST00000477508 TFDP1Q14186 410 aa14.58□□□□□ -0.08
TOP3A-205ENST00000477508 LPIN1Q14693 890 aa14.58□□□□□ -0.08
TOP3A-205ENST00000477508 SHHQ15465 462 aa14.58□□□□□ -0.08
TOP3A-205ENST00000477508 KIZQ2M2Z5 673 aa14.58□□□□□ -0.08
TOP3A-205ENST00000477508 RHPN2Q8IUC4 686 aa14.58□□□□□ -0.08
TOP3A-205ENST00000477508 SYT2Q8N9I0 419 aaPredicted RBP14.58□□□□□ -0.08
TOP3A-205ENST00000477508 LEO1Q8WVC0 666 aaPredicted RBP14.58□□□□□ -0.08
TOP3A-205ENST00000477508 PRPF31Q8WWY3 499 aaKnown RBP14.58□□□□□ -0.08
TOP3A-205ENST00000477508 NLRP7Q8WX94 980 aa14.58□□□□□ -0.08
TOP3A-205ENST00000477508 TMEM143Q96AN5 459 aa14.58□□□□□ -0.08
TOP3A-205ENST00000477508 EPSTI1Q96J88 318 aa14.58□□□□□ -0.08
TOP3A-205ENST00000477508 SCLT1Q96NL6 688 aa14.58□□□□□ -0.08
TOP3A-205ENST00000477508 FTHL17Q9BXU8 183 aa14.58□□□□□ -0.08
TOP3A-205ENST00000477508 IFIH1Q9BYX4 1025 aaKnown RBP14.58□□□□□ -0.08
TOP3A-205ENST00000477508 GCOM2Q9BZD3 368 aaPredicted RBP14.58□□□□□ -0.08
TOP3A-205ENST00000477508 ADAMTS10Q9H324 1103 aa14.58□□□□□ -0.08
TOP3A-205ENST00000477508 XPNPEP1Q9NQW7 623 aa14.58□□□□□ -0.08
TOP3A-205ENST00000477508 CHMP5Q9NZZ3 219 aa14.58□□□□□ -0.08
TOP3A-205ENST00000477508 STK17AQ9UEE5 414 aa14.58□□□□□ -0.08
TOP3A-205ENST00000477508 KCNG1Q9UIX4 513 aa14.58□□□□□ -0.08
TOP3A-205ENST00000477508 GINS2Q9Y248 185 aa14.58□□□□□ -0.08
TOP3A-205ENST00000477508 COL4A3BPQ9Y5P4 624 aa14.58□□□□□ -0.08
TOP3A-205ENST00000477508 TET1Q8NFU7 2136 aa14.57□□□□□ -0.08
TOP3A-205ENST00000477508 E9PMD0 336 aa14.57□□□□□ -0.08
TOP3A-205ENST00000477508 GPR182O15218 404 aa14.57□□□□□ -0.08
TOP3A-205ENST00000477508 RPS6KA5O75582 802 aa14.57□□□□□ -0.08
TOP3A-205ENST00000477508 PLA2G4BP0C869 781 aa14.57□□□□□ -0.08
TOP3A-205ENST00000477508 GHRP10912 638 aa14.57□□□□□ -0.08
TOP3A-205ENST00000477508 PLCG1P19174 1290 aa14.57□□□□□ -0.08
TOP3A-205ENST00000477508 ARL2P36404 184 aa14.57□□□□□ -0.08
TOP3A-205ENST00000477508 LAMTOR4Q0VGL1 99 aa14.57□□□□□ -0.08
TOP3A-205ENST00000477508 PAK2Q13177 524 aa14.57□□□□□ -0.08
TOP3A-205ENST00000477508 DRP2Q13474 957 aa14.57□□□□□ -0.08
TOP3A-205ENST00000477508 KARSQ15046 597 aaKnown RBP14.57□□□□□ -0.08
TOP3A-205ENST00000477508 SPECC1Q5M775 1068 aa14.57□□□□□ -0.08
TOP3A-205ENST00000477508 RRAGBQ5VZM2 374 aa14.57□□□□□ -0.08
TOP3A-205ENST00000477508 DBF4BQ8NFT6 615 aa14.57□□□□□ -0.08
TOP3A-205ENST00000477508 KIFAP3Q92845 792 aa14.57□□□□□ -0.08
TOP3A-205ENST00000477508 VWCEQ96DN2 955 aa14.57□□□□□ -0.08
TOP3A-205ENST00000477508 RNPC3Q96LT9 517 aaKnown RBP14.57□□□□□ -0.08
TOP3A-205ENST00000477508 PYM1Q9BRP8 204 aaKnown RBP14.57□□□□□ -0.08
TOP3A-205ENST00000477508 TSHZ2Q9NRE2 1034 aa14.57□□□□□ -0.08
TOP3A-205ENST00000477508 FAM13BQ9NYF5 915 aa14.57□□□□□ -0.08
TOP3A-205ENST00000477508 PCDHA7Q9UN72 937 aa14.57□□□□□ -0.08
TOP3A-205ENST00000477508 RANBP2P49792 3224 aaKnown RBP14.57□□□□□ -0.08
TOP3A-205ENST00000477508 SSBP05455 408 aaKnown RBP eCLIP14.56□□□□□ -0.08
TOP3A-205ENST00000477508 DARSP14868 501 aaKnown RBP14.56□□□□□ -0.08
TOP3A-205ENST00000477508 GUCY2CP25092 1073 aa14.56□□□□□ -0.08
TOP3A-205ENST00000477508 PHKA2P46019 1235 aa14.56□□□□□ -0.08
TOP3A-205ENST00000477508 SLC12A3P55017 1021 aa14.56□□□□□ -0.08
TOP3A-205ENST00000477508 PPP2R5AQ15172 486 aa14.56□□□□□ -0.08
TOP3A-205ENST00000477508 PCBP1Q15365 356 aaKnown RBP eCLIP14.56□□□□□ -0.08
TOP3A-205ENST00000477508 C9orf50Q5SZB4 431 aa14.56□□□□□ -0.08
TOP3A-205ENST00000477508 AXDND1Q5T1B0 1012 aaPredicted RBP14.56□□□□□ -0.08
TOP3A-205ENST00000477508 RASIP1Q5U651 963 aa14.56□□□□□ -0.08
TOP3A-205ENST00000477508 RINT1Q6NUQ1 792 aa14.56□□□□□ -0.08
TOP3A-205ENST00000477508 USP49Q70CQ1 688 aa14.56□□□□□ -0.08
TOP3A-205ENST00000477508 OTOP2Q7RTS6 562 aa14.56□□□□□ -0.08
TOP3A-205ENST00000477508 KCNK18Q7Z418 384 aa14.56□□□□□ -0.08
TOP3A-205ENST00000477508 DRC1Q96MC2 740 aa14.56□□□□□ -0.08
TOP3A-205ENST00000477508 NLRP4Q96MN2 994 aa14.56□□□□□ -0.08
TOP3A-205ENST00000477508 IPO9Q96P70 1041 aaKnown RBP14.56□□□□□ -0.08
TOP3A-205ENST00000477508 PLIN2Q99541 437 aa14.56□□□□□ -0.08
TOP3A-205ENST00000477508 OSMRQ99650 979 aa14.56□□□□□ -0.08
TOP3A-205ENST00000477508 CUEDC2Q9H467 287 aa14.56□□□□□ -0.08
TOP3A-205ENST00000477508 C17orf75Q9HAS0 396 aa14.56□□□□□ -0.08
TOP3A-205ENST00000477508 BMP2KQ9NSY1 1161 aaPredicted RBP14.56□□□□□ -0.08
TOP3A-205ENST00000477508 PADI3Q9ULW8 664 aa14.56□□□□□ -0.08
TOP3A-205ENST00000477508 TCHHQ07283 1943 aa14.55□□□□□ -0.08
TOP3A-205ENST00000477508 A0A087WZ62 844 aa14.55□□□□□ -0.08
TOP3A-205ENST00000477508 SRGAP2CP0DJJ0 459 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms