RNA–Protein interactions for RNA: ENST00000477477.1

HDLBP-236, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 340 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-236ENST00000477477 GJA10Q969M2 543 aa12.82□□□□□ -0.36
HDLBP-236ENST00000477477 TLE6Q9H808 572 aa12.82□□□□□ -0.36
HDLBP-236ENST00000477477 RNF19AQ9NV58 838 aa12.82□□□□□ -0.36
HDLBP-236ENST00000477477 BARX2Q9UMQ3 279 aaPredicted RBP12.82□□□□□ -0.36
HDLBP-236ENST00000477477 PCDHA4Q9UN74 947 aa12.82□□□□□ -0.36
HDLBP-236ENST00000477477 C5orf42Q9H799 3197 aa12.81□□□□□ -0.36
HDLBP-236ENST00000477477 CYP3A7-CYP3A51PA0A087WV96 503 aa12.81□□□□□ -0.36
HDLBP-236ENST00000477477 M0R2N6 131 aa12.81□□□□□ -0.36
HDLBP-236ENST00000477477 CPLX1O14810 134 aa12.81□□□□□ -0.36
HDLBP-236ENST00000477477 FSCN2O14926 492 aa12.81□□□□□ -0.36
HDLBP-236ENST00000477477 DARSP14868 501 aaKnown RBP12.81□□□□□ -0.36
HDLBP-236ENST00000477477 ZSCAN20P17040 1043 aaPredicted RBP12.81□□□□□ -0.36
HDLBP-236ENST00000477477 CYP3A7P24462 503 aa12.81□□□□□ -0.36
HDLBP-236ENST00000477477 HOXD11P31277 338 aaPredicted RBP12.81□□□□□ -0.36
HDLBP-236ENST00000477477 TBC1D8BQ0IIM8 1120 aa12.81□□□□□ -0.36
HDLBP-236ENST00000477477 NPY5RQ15761 445 aa12.81□□□□□ -0.36
HDLBP-236ENST00000477477 DUSP6Q16828 381 aa12.81□□□□□ -0.36
HDLBP-236ENST00000477477 HERC4Q5GLZ8 1057 aaPredicted RBP12.81□□□□□ -0.36
HDLBP-236ENST00000477477 PDE12Q6L8Q7 609 aaKnown RBP12.81□□□□□ -0.36
HDLBP-236ENST00000477477 B3GNT9Q6UX72 402 aa12.81□□□□□ -0.36
HDLBP-236ENST00000477477 ECHDC2Q86YB7 292 aa12.81□□□□□ -0.36
HDLBP-236ENST00000477477 BLIDQ8IZY5 108 aa12.81□□□□□ -0.36
HDLBP-236ENST00000477477 LRRC43Q8N309 656 aa12.81□□□□□ -0.36
HDLBP-236ENST00000477477 DAGLBQ8NCG7 672 aa12.81□□□□□ -0.36
HDLBP-236ENST00000477477 ZNF668Q96K58 619 aaPredicted RBP12.81□□□□□ -0.36
HDLBP-236ENST00000477477 SCLT1Q96NL6 688 aa12.81□□□□□ -0.36
HDLBP-236ENST00000477477 CASD1Q96PB1 797 aa12.81□□□□□ -0.36
HDLBP-236ENST00000477477 CDCA3Q99618 268 aaPredicted RBP12.81□□□□□ -0.36
HDLBP-236ENST00000477477 MUTYHQ9UIF7 546 aa12.81□□□□□ -0.36
HDLBP-236ENST00000477477 LZTS1Q9Y250 596 aa12.81□□□□□ -0.36
HDLBP-236ENST00000477477 CYP46A1Q9Y6A2 500 aa12.81□□□□□ -0.36
HDLBP-236ENST00000477477 EVPLQ92817 2033 aa12.8□□□□□ -0.36
HDLBP-236ENST00000477477 FSD2A1L4K1 749 aa12.8□□□□□ -0.36
HDLBP-236ENST00000477477 PER2O15055 1255 aa12.8□□□□□ -0.36
HDLBP-236ENST00000477477 ERVFC1P60507 584 aa12.8□□□□□ -0.36
HDLBP-236ENST00000477477 PLCB3Q01970 1234 aa12.8□□□□□ -0.36
HDLBP-236ENST00000477477 DRP2Q13474 957 aa12.8□□□□□ -0.36
HDLBP-236ENST00000477477 XKR3Q5GH77 459 aa12.8□□□□□ -0.36
HDLBP-236ENST00000477477 GALNT17Q6IS24 598 aa12.8□□□□□ -0.36
HDLBP-236ENST00000477477 MOXD1Q6UVY6 613 aa12.8□□□□□ -0.36
HDLBP-236ENST00000477477 LRRC55Q6ZSA7 311 aa12.8□□□□□ -0.36
HDLBP-236ENST00000477477 MIER3Q7Z3K6 550 aa12.8□□□□□ -0.36
HDLBP-236ENST00000477477 RNF135Q8IUD6 432 aa12.8□□□□□ -0.36
HDLBP-236ENST00000477477 ABI1Q8IZP0 508 aa12.8□□□□□ -0.36
HDLBP-236ENST00000477477 FAM177A1Q8N128 213 aaPredicted RBP12.8□□□□□ -0.36
HDLBP-236ENST00000477477 NLRP7Q8WX94 980 aa12.8□□□□□ -0.36
HDLBP-236ENST00000477477 MRPS27Q92552 414 aaKnown RBP12.8□□□□□ -0.36
HDLBP-236ENST00000477477 ZNF274Q96GC6 653 aaPredicted RBP12.8□□□□□ -0.36
HDLBP-236ENST00000477477 MBOAT7Q96N66 472 aa12.8□□□□□ -0.36
HDLBP-236ENST00000477477 LARP6Q9BRS8 491 aaKnown RBP12.8□□□□□ -0.36
HDLBP-236ENST00000477477 NIFKQ9BYG3 293 aaKnown RBP12.8□□□□□ -0.36
HDLBP-236ENST00000477477 TM6SF1Q9BZW5 370 aa12.8□□□□□ -0.36
HDLBP-236ENST00000477477 SEPT9Q9UHD8 586 aaPredicted RBP12.8□□□□□ -0.36
HDLBP-236ENST00000477477 USP15Q9Y4E8 981 aaPredicted RBP12.8□□□□□ -0.36
HDLBP-236ENST00000477477 FNDC1Q4ZHG4 1894 aaPredicted RBP12.8□□□□□ -0.36
HDLBP-236ENST00000477477 PLXNA4Q9HCM2 1894 aa12.8□□□□□ -0.36
HDLBP-236ENST00000477477 A0A0U1RQF3 1178 aa12.79□□□□□ -0.36
HDLBP-236ENST00000477477 STBD1O95210 358 aa12.79□□□□□ -0.36
HDLBP-236ENST00000477477 FGFR4P22455 802 aa12.79□□□□□ -0.36
HDLBP-236ENST00000477477 PPM1AP35813 382 aa12.79□□□□□ -0.36
HDLBP-236ENST00000477477 RBM10P98175 930 aaKnown RBP12.79□□□□□ -0.36
HDLBP-236ENST00000477477 MTERF2Q49AM1 385 aa12.79□□□□□ -0.36
HDLBP-236ENST00000477477 CLLU1OSQ5K130 101 aa12.79□□□□□ -0.36
HDLBP-236ENST00000477477 PLPP4Q5VZY2 271 aa12.79□□□□□ -0.36
HDLBP-236ENST00000477477 CPLX2Q6PUV4 134 aaKnown RBP12.79□□□□□ -0.36
HDLBP-236ENST00000477477 KCNT2Q6UVM3 1135 aa12.79□□□□□ -0.36
HDLBP-236ENST00000477477 RNF169Q8NCN4 708 aa12.79□□□□□ -0.36
HDLBP-236ENST00000477477 VN1R2Q8NFZ6 395 aa12.79□□□□□ -0.36
HDLBP-236ENST00000477477 ETNPPLQ8TBG4 499 aa12.79□□□□□ -0.36
HDLBP-236ENST00000477477 ZNF558Q96NG5 402 aa12.79□□□□□ -0.36
HDLBP-236ENST00000477477 AIFM3Q96NN9 605 aa12.79□□□□□ -0.36
HDLBP-236ENST00000477477 CEP89Q96ST8 783 aa12.79□□□□□ -0.36
HDLBP-236ENST00000477477 TCF25Q9BQ70 676 aa12.79□□□□□ -0.36
HDLBP-236ENST00000477477 PUF60Q9UHX1 559 aaKnown RBP12.79□□□□□ -0.36
HDLBP-236ENST00000477477 MYH9P35579 1960 aaKnown RBP12.79□□□□□ -0.36
HDLBP-236ENST00000477477 MUC6Q6W4X9 2439 aa12.78□□□□□ -0.36
HDLBP-236ENST00000477477 IGKV6-21A0A0C4DH24 114 aa12.78□□□□□ -0.36
HDLBP-236ENST00000477477 TMEM150BA6NC51 233 aa12.78□□□□□ -0.36
HDLBP-236ENST00000477477 LOC730098B7Z3J9 87 aa12.78□□□□□ -0.36
HDLBP-236ENST00000477477 ATF7P17544 494 aaPredicted RBP12.78□□□□□ -0.36
HDLBP-236ENST00000477477 PBX3P40426 434 aa12.78□□□□□ -0.36
HDLBP-236ENST00000477477 STK3Q13188 491 aa12.78□□□□□ -0.36
HDLBP-236ENST00000477477 KCNC3Q14003 757 aa12.78□□□□□ -0.36
HDLBP-236ENST00000477477 CBX2Q14781 532 aaPredicted RBP12.78□□□□□ -0.36
HDLBP-236ENST00000477477 NONOQ15233 471 aaKnown RBP eCLIP12.78□□□□□ -0.36
HDLBP-236ENST00000477477 HFE2Q6ZVN8 426 aa12.78□□□□□ -0.36
HDLBP-236ENST00000477477 KRT25Q7Z3Z0 450 aa12.78□□□□□ -0.36
HDLBP-236ENST00000477477 ZNF598Q86UK7 904 aaKnown RBP12.78□□□□□ -0.36
HDLBP-236ENST00000477477 SUSD6Q92537 303 aa12.78□□□□□ -0.36
HDLBP-236ENST00000477477 SH2D3AQ9BRG2 576 aa12.78□□□□□ -0.36
HDLBP-236ENST00000477477 PHF7Q9BWX1 381 aaPredicted RBP12.78□□□□□ -0.36
HDLBP-236ENST00000477477 GCOM2Q9BZD3 368 aaPredicted RBP12.78□□□□□ -0.36
HDLBP-236ENST00000477477 ENTPD7Q9NQZ7 604 aa12.78□□□□□ -0.36
HDLBP-236ENST00000477477 DACT1Q9NYF0 836 aa12.78□□□□□ -0.36
HDLBP-236ENST00000477477 DDX25Q9UHL0 483 aaKnown RBP12.78□□□□□ -0.36
HDLBP-236ENST00000477477 A0A087WZ62 844 aa12.77□□□□□ -0.37
HDLBP-236ENST00000477477 HIDE1A8MVS5 230 aa12.77□□□□□ -0.37
HDLBP-236ENST00000477477 SLC37A4O43826 429 aa12.77□□□□□ -0.37
HDLBP-236ENST00000477477 CSDE1O75534 798 aaKnown RBP12.77□□□□□ -0.37
HDLBP-236ENST00000477477 EOMESO95936 686 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms