RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 PTK2Q05397 1052 aa17.97■□□□□ 0.47
TMEM53-208ENST00000476724 TCERG1LQ5VWI1 586 aa17.97■□□□□ 0.47
TMEM53-208ENST00000476724 AENQ8WTP8 325 aaKnown RBP17.97■□□□□ 0.47
TMEM53-208ENST00000476724 CNKSR2Q8WXI2 1034 aa17.97■□□□□ 0.47
TMEM53-208ENST00000476724 CLEC4DQ8WXI8 215 aa17.97■□□□□ 0.47
TMEM53-208ENST00000476724 ATG4CQ96DT6 458 aa17.97■□□□□ 0.47
TMEM53-208ENST00000476724 ZFP91Q96JP5 570 aaPredicted RBP17.97■□□□□ 0.47
TMEM53-208ENST00000476724 RIT2Q99578 217 aa17.97■□□□□ 0.47
TMEM53-208ENST00000476724 SELENOOQ9BVL4 669 aa17.97■□□□□ 0.47
TMEM53-208ENST00000476724 DAAM1Q9Y4D1 1078 aa17.97■□□□□ 0.47
TMEM53-208ENST00000476724 AFG3L2Q9Y4W6 797 aa17.97■□□□□ 0.47
TMEM53-208ENST00000476724 NCK2O43639 380 aa17.96■□□□□ 0.47
TMEM53-208ENST00000476724 N4BP1O75113 896 aaKnown RBP17.96■□□□□ 0.47
TMEM53-208ENST00000476724 CXCR5P32302 372 aa17.96■□□□□ 0.47
TMEM53-208ENST00000476724 EPHX2P34913 555 aa17.96■□□□□ 0.47
TMEM53-208ENST00000476724 MUM1L1Q5H9M0 696 aa17.96■□□□□ 0.47
TMEM53-208ENST00000476724 B3GNT9Q6UX72 402 aa17.96■□□□□ 0.47
TMEM53-208ENST00000476724 HS2ST1Q7LGA3 356 aa17.96■□□□□ 0.47
TMEM53-208ENST00000476724 ZNF720Q7Z2F6 126 aa17.96■□□□□ 0.47
TMEM53-208ENST00000476724 FMNL3Q8IVF7 1028 aa17.96■□□□□ 0.47
TMEM53-208ENST00000476724 GOLGA5Q8TBA6 731 aa17.96■□□□□ 0.47
TMEM53-208ENST00000476724 HOMER2Q9NSB8 354 aa17.96■□□□□ 0.47
TMEM53-208ENST00000476724 FAN1Q9Y2M0 1017 aa17.96■□□□□ 0.47
TMEM53-208ENST00000476724 PCDHB13Q9Y5F0 798 aa17.96■□□□□ 0.47
TMEM53-208ENST00000476724 SFI1A8K8P3 1242 aa17.95■□□□□ 0.46
TMEM53-208ENST00000476724 CLIC2O15247 247 aa17.95■□□□□ 0.46
TMEM53-208ENST00000476724 ZMYND10O75800 440 aa17.95■□□□□ 0.46
TMEM53-208ENST00000476724 GFPT2O94808 682 aa17.95■□□□□ 0.46
TMEM53-208ENST00000476724 BCRP11274 1271 aa17.95■□□□□ 0.46
TMEM53-208ENST00000476724 ALAS1P13196 640 aa17.95■□□□□ 0.46
TMEM53-208ENST00000476724 CASP4P49662 377 aa17.95■□□□□ 0.46
TMEM53-208ENST00000476724 ZNF571Q7Z3V5 609 aaPredicted RBP17.95■□□□□ 0.46
TMEM53-208ENST00000476724 FAM186BQ8IYM0 893 aa17.95■□□□□ 0.46
TMEM53-208ENST00000476724 C12orf42Q96LP6 360 aa17.95■□□□□ 0.46
TMEM53-208ENST00000476724 COL20A1Q9P218 1284 aa17.95■□□□□ 0.46
TMEM53-208ENST00000476724 STIM2Q9P246 746 aa17.95■□□□□ 0.46
TMEM53-208ENST00000476724 INTUQ9ULD6 942 aa17.95■□□□□ 0.46
TMEM53-208ENST00000476724 RBBP6Q7Z6E9 1792 aaKnown RBP17.95■□□□□ 0.46
TMEM53-208ENST00000476724 CHMP2AO43633 222 aa17.95■□□□□ 0.46
TMEM53-208ENST00000476724 FERP16591 822 aa17.95■□□□□ 0.46
TMEM53-208ENST00000476724 GUCY2CP25092 1073 aa17.95■□□□□ 0.46
TMEM53-208ENST00000476724 JAM2P57087 298 aa17.95■□□□□ 0.46
TMEM53-208ENST00000476724 C8orf74Q6P047 294 aa17.95■□□□□ 0.46
TMEM53-208ENST00000476724 FAM178BQ8IXR5 827 aa17.95■□□□□ 0.46
TMEM53-208ENST00000476724 MXRA8Q9BRK3 442 aa17.95■□□□□ 0.46
TMEM53-208ENST00000476724 SIX2Q9NPC8 291 aa17.95■□□□□ 0.46
TMEM53-208ENST00000476724 GCNT4Q9P109 453 aa17.95■□□□□ 0.46
TMEM53-208ENST00000476724 NAGPAQ9UK23 515 aa17.95■□□□□ 0.46
TMEM53-208ENST00000476724 C19orf81C9J6K1 198 aa17.94■□□□□ 0.46
TMEM53-208ENST00000476724 VWA5AO00534 786 aa17.94■□□□□ 0.46
TMEM53-208ENST00000476724 NMT1P30419 496 aaKnown RBP17.94■□□□□ 0.46
TMEM53-208ENST00000476724 EPHB4P54760 987 aa17.94■□□□□ 0.46
TMEM53-208ENST00000476724 GYS2P54840 703 aa17.94■□□□□ 0.46
TMEM53-208ENST00000476724 KCNA1Q09470 495 aa17.94■□□□□ 0.46
TMEM53-208ENST00000476724 MYBPC2Q14324 1141 aa17.94■□□□□ 0.46
TMEM53-208ENST00000476724 ALKBH5Q6P6C2 394 aaKnown RBP17.94■□□□□ 0.46
TMEM53-208ENST00000476724 EMBQ6PCB8 327 aa17.94■□□□□ 0.46
TMEM53-208ENST00000476724 MOB2Q70IA6 237 aa17.94■□□□□ 0.46
TMEM53-208ENST00000476724 GOLGA6L1Q8N7Z2 621 aa17.94■□□□□ 0.46
TMEM53-208ENST00000476724 FIZ1Q96SL8 496 aa17.94■□□□□ 0.46
TMEM53-208ENST00000476724 PSMB7Q99436 277 aa17.94■□□□□ 0.46
TMEM53-208ENST00000476724 UNC45AQ9H3U1 944 aa17.94■□□□□ 0.46
TMEM53-208ENST00000476724 DMGDHQ9UI17 866 aaKnown RBP17.94■□□□□ 0.46
TMEM53-208ENST00000476724 ZMYM2Q9UBW7 1377 aa17.94■□□□□ 0.46
TMEM53-208ENST00000476724 IPO5O00410 1097 aaKnown RBP17.94■□□□□ 0.46
TMEM53-208ENST00000476724 SYF2O95926 243 aaKnown RBP17.94■□□□□ 0.46
TMEM53-208ENST00000476724 MYBL2P10244 700 aa17.94■□□□□ 0.46
TMEM53-208ENST00000476724 MATR3P43243 847 aaKnown RBP eCLIP17.94■□□□□ 0.46
TMEM53-208ENST00000476724 HSD17B4P51659 736 aa17.94■□□□□ 0.46
TMEM53-208ENST00000476724 PPP2R5AQ15172 486 aa17.94■□□□□ 0.46
TMEM53-208ENST00000476724 ENOX2Q16206 610 aaKnown RBP17.94■□□□□ 0.46
TMEM53-208ENST00000476724 SLC30A10Q6XR72 485 aa17.94■□□□□ 0.46
TMEM53-208ENST00000476724 USP50Q70EL3 339 aaPredicted RBP17.94■□□□□ 0.46
TMEM53-208ENST00000476724 NIPA1Q7RTP0 329 aa17.94■□□□□ 0.46
TMEM53-208ENST00000476724 LMBR1Q8WVP7 490 aa17.94■□□□□ 0.46
TMEM53-208ENST00000476724 DMAC2Q9NW81 257 aa17.94■□□□□ 0.46
TMEM53-208ENST00000476724 FRMD4BQ9Y2L6 1034 aa17.94■□□□□ 0.46
TMEM53-208ENST00000476724 GLTPD2A6NH11 291 aa17.93■□□□□ 0.46
TMEM53-208ENST00000476724 ARP10275 920 aa17.93■□□□□ 0.46
TMEM53-208ENST00000476724 STAT1P42224 750 aa17.93■□□□□ 0.46
TMEM53-208ENST00000476724 LMAN1P49257 510 aa17.93■□□□□ 0.46
TMEM53-208ENST00000476724 IFT20Q8IY31 132 aa17.93■□□□□ 0.46
TMEM53-208ENST00000476724 RBM46Q8TBY0 533 aaKnown RBP17.93■□□□□ 0.46
TMEM53-208ENST00000476724 TAF4BQ92750 862 aa17.93■□□□□ 0.46
TMEM53-208ENST00000476724 CDCA5Q96FF9 252 aa17.93■□□□□ 0.46
TMEM53-208ENST00000476724 NENFQ9UMX5 172 aa17.93■□□□□ 0.46
TMEM53-208ENST00000476724 RIPK3Q9Y572 518 aa17.93■□□□□ 0.46
TMEM53-208ENST00000476724 ZC3H4Q9UPT8 1303 aaKnown RBP17.93■□□□□ 0.46
TMEM53-208ENST00000476724 A0A0A6YYK5 440 aaPredicted RBP17.92■□□□□ 0.46
TMEM53-208ENST00000476724 ARHGEF35A5YM69 484 aa17.92■□□□□ 0.46
TMEM53-208ENST00000476724 ZBED4O75132 1171 aa17.92■□□□□ 0.46
TMEM53-208ENST00000476724 CLSTN1O94985 981 aa17.92■□□□□ 0.46
TMEM53-208ENST00000476724 FTCDO95954 541 aa17.92■□□□□ 0.46
TMEM53-208ENST00000476724 ODR4Q5SWX8 454 aa17.92■□□□□ 0.46
TMEM53-208ENST00000476724 MCF2L2Q86YR7 1114 aa17.92■□□□□ 0.46
TMEM53-208ENST00000476724 SLC9A9Q8IVB4 645 aa17.92■□□□□ 0.46
TMEM53-208ENST00000476724 SAMD3Q8N6K7 520 aa17.92■□□□□ 0.46
TMEM53-208ENST00000476724 HDAC7Q8WUI4 952 aa17.92■□□□□ 0.46
TMEM53-208ENST00000476724 PBKQ96KB5 322 aa17.92■□□□□ 0.46
TMEM53-208ENST00000476724 PACSIN1Q9BY11 444 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms