RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 ITKQ08881 620 aa6.77□□□□□ -1.33
PTCD3-211ENST00000476215 TRMT10BQ6PF06 316 aaKnown RBP6.77□□□□□ -1.33
PTCD3-211ENST00000476215 ESPNLQ6ZVH7 1005 aa6.77□□□□□ -1.33
PTCD3-211ENST00000476215 MTMR8Q96EF0 704 aa6.77□□□□□ -1.33
PTCD3-211ENST00000476215 AHCYL2Q96HN2 611 aaKnown RBP6.77□□□□□ -1.33
PTCD3-211ENST00000476215 AJUBAQ96IF1 538 aa6.77□□□□□ -1.33
PTCD3-211ENST00000476215 SAMD11Q96NU1 681 aa6.77□□□□□ -1.33
PTCD3-211ENST00000476215 PUS7Q96PZ0 661 aaKnown RBP6.77□□□□□ -1.33
PTCD3-211ENST00000476215 MYL10Q9BUA6 226 aa6.77□□□□□ -1.33
PTCD3-211ENST00000476215 KRTAP3-1Q9BYR8 98 aa6.77□□□□□ -1.33
PTCD3-211ENST00000476215 SEMA4AQ9H3S1 761 aa6.77□□□□□ -1.33
PTCD3-211ENST00000476215 TOPORSQ9NS56 1045 aaPredicted RBP6.77□□□□□ -1.33
PTCD3-211ENST00000476215 PRPF6O94906 941 aaKnown RBP6.76□□□□□ -1.33
PTCD3-211ENST00000476215 APEX1P27695 318 aaKnown RBP6.76□□□□□ -1.33
PTCD3-211ENST00000476215 NFATC3Q12968 1075 aa6.76□□□□□ -1.33
PTCD3-211ENST00000476215 MTMR1Q13613 665 aa6.76□□□□□ -1.33
PTCD3-211ENST00000476215 MYBPC3Q14896 1274 aa6.76□□□□□ -1.33
PTCD3-211ENST00000476215 WDR72Q3MJ13 1102 aa6.76□□□□□ -1.33
PTCD3-211ENST00000476215 TRIM8Q9BZR9 551 aa6.76□□□□□ -1.33
PTCD3-211ENST00000476215 C14orf119Q9NWQ9 140 aa6.76□□□□□ -1.33
PTCD3-211ENST00000476215 DDX56Q9NY93 547 aaKnown RBP6.76□□□□□ -1.33
PTCD3-211ENST00000476215 FTSJ1Q9UET6 329 aa6.76□□□□□ -1.33
PTCD3-211ENST00000476215 KCNG1Q9UIX4 513 aa6.76□□□□□ -1.33
PTCD3-211ENST00000476215 WASHC2CQ9Y4E1 1318 aa6.76□□□□□ -1.33
PTCD3-211ENST00000476215 CYP1A1P04798 512 aaPredicted RBP6.75□□□□□ -1.33
PTCD3-211ENST00000476215 CD83Q01151 205 aa6.75□□□□□ -1.33
PTCD3-211ENST00000476215 ADCY2Q08462 1091 aa6.75□□□□□ -1.33
PTCD3-211ENST00000476215 STILQ15468 1287 aa6.75□□□□□ -1.33
PTCD3-211ENST00000476215 BRDTQ58F21 947 aaPredicted RBP6.75□□□□□ -1.33
PTCD3-211ENST00000476215 CXorf67Q86X51 503 aaPredicted RBP6.75□□□□□ -1.33
PTCD3-211ENST00000476215 REXO1L1PQ8IX06 675 aa6.75□□□□□ -1.33
PTCD3-211ENST00000476215 CMIPQ8IY22 773 aa6.75□□□□□ -1.33
PTCD3-211ENST00000476215 NUDT10Q8NFP7 164 aa6.75□□□□□ -1.33
PTCD3-211ENST00000476215 FERMT2Q96AC1 680 aa6.75□□□□□ -1.33
PTCD3-211ENST00000476215 NUDT11Q96G61 164 aa6.75□□□□□ -1.33
PTCD3-211ENST00000476215 C1QTNF3Q9BXJ4 246 aa6.75□□□□□ -1.33
PTCD3-211ENST00000476215 KATNBL1Q9H079 304 aa6.75□□□□□ -1.33
PTCD3-211ENST00000476215 CCDC8Q9H0W5 538 aaPredicted RBP6.75□□□□□ -1.33
PTCD3-211ENST00000476215 GOLGA8AA7E2F4 631 aa6.74□□□□□ -1.33
PTCD3-211ENST00000476215 GOLGA8BA8MQT2 603 aa6.74□□□□□ -1.33
PTCD3-211ENST00000476215 H0Y858 1186 aa6.74□□□□□ -1.33
PTCD3-211ENST00000476215 ELL2O00472 640 aaPredicted RBP6.74□□□□□ -1.33
PTCD3-211ENST00000476215 LAMTOR5O43504 91 aa6.74□□□□□ -1.33
PTCD3-211ENST00000476215 ADCY8P40145 1251 aa6.74□□□□□ -1.33
PTCD3-211ENST00000476215 MAGEA10P43363 369 aaPredicted RBP6.74□□□□□ -1.33
PTCD3-211ENST00000476215 SCAND1P57086 179 aa6.74□□□□□ -1.33
PTCD3-211ENST00000476215 NOLC1Q14978 699 aaKnown RBP eCLIP6.74□□□□□ -1.33
PTCD3-211ENST00000476215 PDCD1Q15116 288 aa6.74□□□□□ -1.33
PTCD3-211ENST00000476215 KANK2Q63ZY3 851 aa6.74□□□□□ -1.33
PTCD3-211ENST00000476215 KIAA1841Q6NSI8 718 aa6.74□□□□□ -1.33
PTCD3-211ENST00000476215 UNQ6494/PRO21346Q6UXR6 183 aa6.74□□□□□ -1.33
PTCD3-211ENST00000476215 Q6ZUG5 572 aa6.74□□□□□ -1.33
PTCD3-211ENST00000476215 CXXC5Q7LFL8 322 aaKnown RBP6.74□□□□□ -1.33
PTCD3-211ENST00000476215 STAG1Q8WVM7 1258 aa6.74□□□□□ -1.33
PTCD3-211ENST00000476215 RPGRQ92834 1020 aaKnown RBP6.74□□□□□ -1.33
PTCD3-211ENST00000476215 ANO3Q9BYT9 981 aa6.74□□□□□ -1.33
PTCD3-211ENST00000476215 PPP4R1LQ9P1A2 415 aa6.74□□□□□ -1.33
PTCD3-211ENST00000476215 TRHDEQ9UKU6 1024 aa6.74□□□□□ -1.33
PTCD3-211ENST00000476215 ST20-MTHFSA0A0A6YYL1 179 aa6.73□□□□□ -1.33
PTCD3-211ENST00000476215 PDGFRBP09619 1106 aa6.73□□□□□ -1.33
PTCD3-211ENST00000476215 CLEC2LP0C7M8 214 aa6.73□□□□□ -1.33
PTCD3-211ENST00000476215 ZBTB41Q5SVQ8 909 aa6.73□□□□□ -1.33
PTCD3-211ENST00000476215 OTOP2Q7RTS6 562 aa6.73□□□□□ -1.33
PTCD3-211ENST00000476215 KBTBD2Q8IY47 623 aa6.73□□□□□ -1.33
PTCD3-211ENST00000476215 BARX1Q9HBU1 254 aaPredicted RBP6.73□□□□□ -1.33
PTCD3-211ENST00000476215 TYW1Q9NV66 732 aaKnown RBP6.73□□□□□ -1.33
PTCD3-211ENST00000476215 PPP2R3BQ9Y5P8 575 aa6.73□□□□□ -1.33
PTCD3-211ENST00000476215 WASHC2AQ641Q2 1341 aa6.73□□□□□ -1.33
PTCD3-211ENST00000476215 PRSS38A1L453 326 aa6.72□□□□□ -1.33
PTCD3-211ENST00000476215 C1QTNF3-AMACRE9PGA6 284 aa6.72□□□□□ -1.33
PTCD3-211ENST00000476215 K7ESF4 209 aa6.72□□□□□ -1.33
PTCD3-211ENST00000476215 CSF2RBP32927 897 aa6.72□□□□□ -1.33
PTCD3-211ENST00000476215 MANFP55145 182 aaKnown RBP6.72□□□□□ -1.33
PTCD3-211ENST00000476215 BCAR1P56945 870 aa6.72□□□□□ -1.33
PTCD3-211ENST00000476215 ERVK-21P61565 698 aa6.72□□□□□ -1.33
PTCD3-211ENST00000476215 ADAM17P78536 824 aa6.72□□□□□ -1.33
PTCD3-211ENST00000476215 EXOSC10Q01780 885 aaKnown RBP6.72□□□□□ -1.33
PTCD3-211ENST00000476215 MAP3K12Q12852 859 aa6.72□□□□□ -1.33
PTCD3-211ENST00000476215 MOGSQ13724 837 aa6.72□□□□□ -1.33
PTCD3-211ENST00000476215 ZNF827Q17R98 1081 aa6.72□□□□□ -1.33
PTCD3-211ENST00000476215 SYDE2Q5VT97 1194 aa6.72□□□□□ -1.33
PTCD3-211ENST00000476215 GRAMD4Q6IC98 578 aa6.72□□□□□ -1.33
PTCD3-211ENST00000476215 CCDC62Q6P9F0 684 aa6.72□□□□□ -1.33
PTCD3-211ENST00000476215 DBX2Q6ZNG2 339 aa6.72□□□□□ -1.33
PTCD3-211ENST00000476215 KANSL1Q7Z3B3 1105 aa6.72□□□□□ -1.33
PTCD3-211ENST00000476215 DNERQ8NFT8 737 aa6.72□□□□□ -1.33
PTCD3-211ENST00000476215 TGFBRAP1Q8WUH2 860 aa6.72□□□□□ -1.33
PTCD3-211ENST00000476215 BORCS6Q96GS4 357 aa6.72□□□□□ -1.33
PTCD3-211ENST00000476215 ACAP3Q96P50 834 aa6.72□□□□□ -1.33
PTCD3-211ENST00000476215 CEP89Q96ST8 783 aa6.72□□□□□ -1.33
PTCD3-211ENST00000476215 SMAD5Q99717 465 aaKnown RBP6.72□□□□□ -1.33
PTCD3-211ENST00000476215 MENTQ9BUN1 341 aa6.72□□□□□ -1.33
PTCD3-211ENST00000476215 MTG2Q9H4K7 406 aa6.72□□□□□ -1.33
PTCD3-211ENST00000476215 FBXO10Q9UK96 956 aa6.72□□□□□ -1.33
PTCD3-211ENST00000476215 PCDH8O95206 1070 aa6.71□□□□□ -1.34
PTCD3-211ENST00000476215 PPP2CBP62714 309 aa6.71□□□□□ -1.34
PTCD3-211ENST00000476215 PPP2CAP67775 309 aa6.71□□□□□ -1.34
PTCD3-211ENST00000476215 KLF1Q13351 362 aaPredicted RBP6.71□□□□□ -1.34
PTCD3-211ENST00000476215 CT83Q5H943 113 aa6.71□□□□□ -1.34
PTCD3-211ENST00000476215 LMBR1Q8WVP7 490 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms