RNA–Protein interactions for RNA: ENST00000475732.1

DMD-223, Transcript of dystrophin, human

TSL 5

Gene DMD, Length 669 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DMD-223	ENST00000475732	LINC01465	Q8N7H1	131 aa		11.15	□□□□□ -0.62
DMD-223	ENST00000475732	RNF25	Q96BH1	459 aa	Predicted RBP	11.15	□□□□□ -0.62
DMD-223	ENST00000475732	MAP7D2	Q96T17	732 aa		11.15	□□□□□ -0.62
DMD-223	ENST00000475732	MTR	Q99707	1265 aa		11.15	□□□□□ -0.62
DMD-223	ENST00000475732	LBHD1	Q9BQE6	289 aa	Predicted RBP	11.15	□□□□□ -0.62
DMD-223	ENST00000475732	BHMT2	Q9H2M3	363 aa		11.15	□□□□□ -0.62
DMD-223	ENST00000475732	ATP6V0A4	Q9HBG4	840 aa		11.15	□□□□□ -0.62
DMD-223	ENST00000475732	GDPD2	Q9HCC8	539 aa		11.15	□□□□□ -0.62
DMD-223	ENST00000475732	AKT3	Q9Y243	479 aa		11.15	□□□□□ -0.62
DMD-223	ENST00000475732	MYH11	P35749	1972 aa		11.15	□□□□□ -0.62
DMD-223	ENST00000475732	CEP290	O15078	2479 aa		11.15	□□□□□ -0.62
DMD-223	ENST00000475732	SI	P14410	1827 aa		11.14	□□□□□ -0.63
DMD-223	ENST00000475732	RSPH10B2	B2RC85	870 aa		11.14	□□□□□ -0.63
DMD-223	ENST00000475732	USO1	O60763	962 aa	Known RBP	11.14	□□□□□ -0.63
DMD-223	ENST00000475732	PARN	O95453	639 aa	Known RBP	11.14	□□□□□ -0.63
DMD-223	ENST00000475732	CTSH	P09668	335 aa		11.14	□□□□□ -0.63
DMD-223	ENST00000475732	IQCF3	P0C7M6	154 aa		11.14	□□□□□ -0.63
DMD-223	ENST00000475732	RSPH10B	P0C881	870 aa		11.14	□□□□□ -0.63
DMD-223	ENST00000475732	MRPS6	P82932	125 aa	Known RBP	11.14	□□□□□ -0.63
DMD-223	ENST00000475732	CDC42EP1	Q00587	391 aa		11.14	□□□□□ -0.63
DMD-223	ENST00000475732	CSPP1	Q1MSJ5	1256 aa		11.14	□□□□□ -0.63
DMD-223	ENST00000475732	IER5	Q5VY09	327 aa		11.14	□□□□□ -0.63
DMD-223	ENST00000475732	RRAGB	Q5VZM2	374 aa		11.14	□□□□□ -0.63
DMD-223	ENST00000475732	RESP18	Q5W5W9	173 aa		11.14	□□□□□ -0.63
DMD-223	ENST00000475732	PADI6	Q6TGC4	694 aa		11.14	□□□□□ -0.63
DMD-223	ENST00000475732	CCDC73	Q6ZRK6	1079 aa		11.14	□□□□□ -0.63
DMD-223	ENST00000475732	LRRC8D	Q7L1W4	858 aa		11.14	□□□□□ -0.63
DMD-223	ENST00000475732	KCNK18	Q7Z418	384 aa		11.14	□□□□□ -0.63
DMD-223	ENST00000475732	SPNS2	Q8IVW8	549 aa		11.14	□□□□□ -0.63
DMD-223	ENST00000475732	ZNF710	Q8N1W2	664 aa		11.14	□□□□□ -0.63
DMD-223	ENST00000475732	MCPH1	Q8NEM0	835 aa		11.14	□□□□□ -0.63
DMD-223	ENST00000475732	TCP11	Q8WWU5	503 aa		11.14	□□□□□ -0.63
DMD-223	ENST00000475732	BAD	Q92934	168 aa		11.14	□□□□□ -0.63
DMD-223	ENST00000475732	SCLY	Q96I15	445 aa		11.14	□□□□□ -0.63
DMD-223	ENST00000475732	HS3ST6	Q96QI5	342 aa		11.14	□□□□□ -0.63
DMD-223	ENST00000475732	PANK2	Q9BZ23	570 aa		11.14	□□□□□ -0.63
DMD-223	ENST00000475732	WNT8A	Q9H1J5	351 aa		11.14	□□□□□ -0.63
DMD-223	ENST00000475732	FAM13B	Q9NYF5	915 aa		11.14	□□□□□ -0.63
DMD-223	ENST00000475732	STK17A	Q9UEE5	414 aa		11.14	□□□□□ -0.63
DMD-223	ENST00000475732	GOLGA6L4	A6NEF3	574 aa		11.13	□□□□□ -0.63
DMD-223	ENST00000475732		H0YGN5	161 aa		11.13	□□□□□ -0.63
DMD-223	ENST00000475732	VTN	P04004	478 aa		11.13	□□□□□ -0.63
DMD-223	ENST00000475732	SSB	P05455	408 aa	Known RBP eCLIP	11.13	□□□□□ -0.63
DMD-223	ENST00000475732	PLA2G4B	P0C869	781 aa		11.13	□□□□□ -0.63
DMD-223	ENST00000475732	HOXB3	P14651	431 aa	Predicted RBP	11.13	□□□□□ -0.63
DMD-223	ENST00000475732	CYP11B2	P19099	503 aa		11.13	□□□□□ -0.63
DMD-223	ENST00000475732	CMA1	P23946	247 aa		11.13	□□□□□ -0.63
DMD-223	ENST00000475732	RFC2	P35250	354 aa		11.13	□□□□□ -0.63
DMD-223	ENST00000475732	STAT6	P42226	847 aa		11.13	□□□□□ -0.63
DMD-223	ENST00000475732	FPGS	Q05932	587 aa		11.13	□□□□□ -0.63
DMD-223	ENST00000475732	TMEM62	Q0P6H9	643 aa		11.13	□□□□□ -0.63
DMD-223	ENST00000475732	FAM26D	Q5JW98	314 aa		11.13	□□□□□ -0.63
DMD-223	ENST00000475732	PDILT	Q8N807	584 aa		11.13	□□□□□ -0.63
DMD-223	ENST00000475732	SYT2	Q8N9I0	419 aa	Predicted RBP	11.13	□□□□□ -0.63
DMD-223	ENST00000475732	LARP4B	Q92615	738 aa	Known RBP	11.13	□□□□□ -0.63
DMD-223	ENST00000475732	RAD54L	Q92698	747 aa		11.13	□□□□□ -0.63
DMD-223	ENST00000475732	CELF4	Q9BZC1	486 aa	Known RBP	11.13	□□□□□ -0.63
DMD-223	ENST00000475732	XPNPEP1	Q9NQW7	623 aa		11.13	□□□□□ -0.63
DMD-223	ENST00000475732	BLOC1S4	Q9NUP1	217 aa		11.13	□□□□□ -0.63
DMD-223	ENST00000475732	KCND2	Q9NZV8	630 aa		11.13	□□□□□ -0.63
DMD-223	ENST00000475732	SUCLA2	Q9P2R7	463 aa	Predicted RBP	11.13	□□□□□ -0.63
DMD-223	ENST00000475732	TRPV2	Q9Y5S1	764 aa		11.13	□□□□□ -0.63
DMD-223	ENST00000475732	CDY2A	Q9Y6F7	541 aa		11.13	□□□□□ -0.63
DMD-223	ENST00000475732		A0A1W2PQ27	194 aa		11.12	□□□□□ -0.63
DMD-223	ENST00000475732		A0A1W2PQ64	194 aa		11.12	□□□□□ -0.63
DMD-223	ENST00000475732		A0A1W2PQD8	194 aa		11.12	□□□□□ -0.63
DMD-223	ENST00000475732	ASAP2	O43150	1006 aa		11.12	□□□□□ -0.63
DMD-223	ENST00000475732	CHRNA1	P02708	482 aa		11.12	□□□□□ -0.63
DMD-223	ENST00000475732	CSF2RA	P15509	400 aa		11.12	□□□□□ -0.63
DMD-223	ENST00000475732	MAGEA10	P43363	369 aa	Predicted RBP	11.12	□□□□□ -0.63
DMD-223	ENST00000475732	SLC12A3	P55017	1021 aa		11.12	□□□□□ -0.63
DMD-223	ENST00000475732	NLRP11	P59045	1033 aa	Known RBP	11.12	□□□□□ -0.63
DMD-223	ENST00000475732	MDM2	Q00987	491 aa	Predicted RBP	11.12	□□□□□ -0.63
DMD-223	ENST00000475732	MGAT3	Q09327	533 aa		11.12	□□□□□ -0.63
DMD-223	ENST00000475732	PPIG	Q13427	754 aa	Known RBP eCLIP	11.12	□□□□□ -0.63
DMD-223	ENST00000475732	DRP2	Q13474	957 aa		11.12	□□□□□ -0.63
DMD-223	ENST00000475732	MCM6	Q14566	821 aa		11.12	□□□□□ -0.63
DMD-223	ENST00000475732	MXD4	Q14582	209 aa	Predicted RBP	11.12	□□□□□ -0.63
DMD-223	ENST00000475732	FAM102B	Q5T8I3	360 aa		11.12	□□□□□ -0.63
DMD-223	ENST00000475732	RINT1	Q6NUQ1	792 aa		11.12	□□□□□ -0.63
DMD-223	ENST00000475732	TRAF7	Q6Q0C0	670 aa		11.12	□□□□□ -0.63
DMD-223	ENST00000475732	MAEA	Q7L5Y9	396 aa		11.12	□□□□□ -0.63
DMD-223	ENST00000475732	RHPN2	Q8IUC4	686 aa		11.12	□□□□□ -0.63
DMD-223	ENST00000475732	RPUSD2	Q8IZ73	545 aa	Known RBP	11.12	□□□□□ -0.63
DMD-223	ENST00000475732	IQUB	Q8NA54	791 aa		11.12	□□□□□ -0.63
DMD-223	ENST00000475732	LRRC15	Q8TF66	581 aa		11.12	□□□□□ -0.63
DMD-223	ENST00000475732	PRPF31	Q8WWY3	499 aa	Known RBP	11.12	□□□□□ -0.63
DMD-223	ENST00000475732	PSPC1	Q8WXF1	523 aa	Known RBP	11.12	□□□□□ -0.63
DMD-223	ENST00000475732	TMEM143	Q96AN5	459 aa		11.12	□□□□□ -0.63
DMD-223	ENST00000475732	PYM1	Q9BRP8	204 aa	Known RBP	11.12	□□□□□ -0.63
DMD-223	ENST00000475732	CUEDC2	Q9H467	287 aa		11.12	□□□□□ -0.63
DMD-223	ENST00000475732	KCNH3	Q9ULD8	1083 aa		11.12	□□□□□ -0.63
DMD-223	ENST00000475732	COL4A3BP	Q9Y5P4	624 aa		11.12	□□□□□ -0.63
DMD-223	ENST00000475732	TET1	Q8NFU7	2136 aa		11.12	□□□□□ -0.63
DMD-223	ENST00000475732		A0A087X0B3	334 aa		11.11	□□□□□ -0.63
DMD-223	ENST00000475732		A0A1B0GVL5	298 aa		11.11	□□□□□ -0.63
DMD-223	ENST00000475732	POLR2D	O15514	142 aa	Known RBP	11.11	□□□□□ -0.63
DMD-223	ENST00000475732	GPR32	O75388	356 aa		11.11	□□□□□ -0.63
DMD-223	ENST00000475732	PFKM	P08237	780 aa		11.11	□□□□□ -0.63
DMD-223	ENST00000475732	PFKFB1	P16118	471 aa		11.11	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms