RNA–Protein interactions for RNA: ENST00000475344.1

LTN1-204, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene LTN1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-204ENST00000475344 SLC26A4O43511 780 aa6.71□□□□□ -1.34
LTN1-204ENST00000475344 CDC45O75419 566 aa6.71□□□□□ -1.34
LTN1-204ENST00000475344 ATP2A2P16615 1042 aaKnown RBP6.71□□□□□ -1.34
LTN1-204ENST00000475344 HGFACQ04756 655 aa6.71□□□□□ -1.34
LTN1-204ENST00000475344 FOXL1Q12952 345 aa6.71□□□□□ -1.34
LTN1-204ENST00000475344 DUSP8Q13202 625 aa6.71□□□□□ -1.34
LTN1-204ENST00000475344 GRM7Q14831 915 aa6.71□□□□□ -1.34
LTN1-204ENST00000475344 USP39Q53GS9 565 aaKnown RBP6.71□□□□□ -1.34
LTN1-204ENST00000475344 LRRTM3Q86VH5 581 aa6.71□□□□□ -1.34
LTN1-204ENST00000475344 NME9Q86XW9 330 aa6.71□□□□□ -1.34
LTN1-204ENST00000475344 ZNF808Q8N4W9 903 aaPredicted RBP6.71□□□□□ -1.34
LTN1-204ENST00000475344 FAM89AQ96GI7 184 aa6.71□□□□□ -1.34
LTN1-204ENST00000475344 ZNF341Q9BYN7 854 aa6.71□□□□□ -1.34
LTN1-204ENST00000475344 THG1LQ9NWX6 298 aaKnown RBP6.71□□□□□ -1.34
LTN1-204ENST00000475344 PLA2G3Q9NZ20 509 aa6.71□□□□□ -1.34
LTN1-204ENST00000475344 DNAI1Q9UI46 699 aa6.71□□□□□ -1.34
LTN1-204ENST00000475344 VWA7Q9Y334 891 aa6.71□□□□□ -1.34
LTN1-204ENST00000475344 SPO11Q9Y5K1 396 aa6.71□□□□□ -1.34
LTN1-204ENST00000475344 A0A1W2PRX2 142 aa6.7□□□□□ -1.34
LTN1-204ENST00000475344 GOLGA8BA8MQT2 603 aa6.7□□□□□ -1.34
LTN1-204ENST00000475344 TACR2P21452 398 aa6.7□□□□□ -1.34
LTN1-204ENST00000475344 RIN1Q13671 783 aa6.7□□□□□ -1.34
LTN1-204ENST00000475344 MYBPC3Q14896 1274 aa6.7□□□□□ -1.34
LTN1-204ENST00000475344 EPHA7Q15375 998 aa6.7□□□□□ -1.34
LTN1-204ENST00000475344 CREB3L3Q68CJ9 461 aa6.7□□□□□ -1.34
LTN1-204ENST00000475344 SGMS1Q86VZ5 419 aa6.7□□□□□ -1.34
LTN1-204ENST00000475344 NIM1KQ8IY84 436 aa6.7□□□□□ -1.34
LTN1-204ENST00000475344 D2HGDHQ8N465 521 aa6.7□□□□□ -1.34
LTN1-204ENST00000475344 CHTF18Q8WVB6 975 aa6.7□□□□□ -1.34
LTN1-204ENST00000475344 EDAQ92838 391 aa6.7□□□□□ -1.34
LTN1-204ENST00000475344 NINJ1Q92982 152 aa6.7□□□□□ -1.34
LTN1-204ENST00000475344 GFM2Q969S9 779 aaKnown RBP6.7□□□□□ -1.34
LTN1-204ENST00000475344 DYDC2Q96IM9 177 aa6.7□□□□□ -1.34
LTN1-204ENST00000475344 ZNF747Q9BV97 191 aa6.7□□□□□ -1.34
LTN1-204ENST00000475344 POFUT1Q9H488 388 aa6.7□□□□□ -1.34
LTN1-204ENST00000475344 TLR9Q9NR96 1032 aa6.7□□□□□ -1.34
LTN1-204ENST00000475344 KCMF1Q9P0J7 381 aa6.7□□□□□ -1.34
LTN1-204ENST00000475344 CTDP1Q9Y5B0 961 aaPredicted RBP6.7□□□□□ -1.34
LTN1-204ENST00000475344 C2orf78A6NCI8 922 aa6.69□□□□□ -1.34
LTN1-204ENST00000475344 MAFO75444 373 aaPredicted RBP6.69□□□□□ -1.34
LTN1-204ENST00000475344 HIBADHP31937 336 aaKnown RBP6.69□□□□□ -1.34
LTN1-204ENST00000475344 SESN2P58004 480 aaPredicted RBP6.69□□□□□ -1.34
LTN1-204ENST00000475344 HHEXQ03014 270 aa6.69□□□□□ -1.34
LTN1-204ENST00000475344 ADCY2Q08462 1091 aa6.69□□□□□ -1.34
LTN1-204ENST00000475344 ADCY1Q08828 1119 aa6.69□□□□□ -1.34
LTN1-204ENST00000475344 SART3Q15020 963 aaKnown RBP6.69□□□□□ -1.34
LTN1-204ENST00000475344 PCBP1Q15365 356 aaKnown RBP eCLIP6.69□□□□□ -1.34
LTN1-204ENST00000475344 TIGD7Q6NT04 549 aaPredicted RBP6.69□□□□□ -1.34
LTN1-204ENST00000475344 Q6ZSN1 163 aa6.69□□□□□ -1.34
LTN1-204ENST00000475344 JAZF1Q86VZ6 243 aa6.69□□□□□ -1.34
LTN1-204ENST00000475344 PHYKPLQ8IUZ5 450 aa6.69□□□□□ -1.34
LTN1-204ENST00000475344 ANKRD53Q8N9V6 530 aa6.69□□□□□ -1.34
LTN1-204ENST00000475344 SLC7A6OSQ96CW6 309 aaPredicted RBP6.69□□□□□ -1.34
LTN1-204ENST00000475344 GPR101Q96P66 508 aaPredicted RBP6.69□□□□□ -1.34
LTN1-204ENST00000475344 MYL10Q9BUA6 226 aa6.69□□□□□ -1.34
LTN1-204ENST00000475344 CSRNP2Q9H175 543 aa6.69□□□□□ -1.34
LTN1-204ENST00000475344 NELFAQ9H3P2 528 aa6.69□□□□□ -1.34
LTN1-204ENST00000475344 AGO3Q9H9G7 860 aaKnown RBP6.69□□□□□ -1.34
LTN1-204ENST00000475344 POLR3BQ9NW08 1133 aaPredicted RBP6.69□□□□□ -1.34
LTN1-204ENST00000475344 SRRDQ9UH36 339 aa6.69□□□□□ -1.34
LTN1-204ENST00000475344 CAPN14A8MX76 684 aa6.68□□□□□ -1.34
LTN1-204ENST00000475344 PRPF6O94906 941 aaKnown RBP6.68□□□□□ -1.34
LTN1-204ENST00000475344 F2P00734 622 aa6.68□□□□□ -1.34
LTN1-204ENST00000475344 BCAR1P56945 870 aa6.68□□□□□ -1.34
LTN1-204ENST00000475344 BPIFB4P59827 614 aa6.68□□□□□ -1.34
LTN1-204ENST00000475344 TCIRG1Q13488 830 aa6.68□□□□□ -1.34
LTN1-204ENST00000475344 SAFB2Q14151 953 aaKnown RBP eCLIP6.68□□□□□ -1.34
LTN1-204ENST00000475344 KRT40Q6A162 431 aa6.68□□□□□ -1.34
LTN1-204ENST00000475344 PASD1Q8IV76 773 aa6.68□□□□□ -1.34
LTN1-204ENST00000475344 SLC16A11Q8NCK7 471 aa6.68□□□□□ -1.34
LTN1-204ENST00000475344 EXTL1Q92935 676 aa6.68□□□□□ -1.34
LTN1-204ENST00000475344 LPPQ93052 612 aa6.68□□□□□ -1.34
LTN1-204ENST00000475344 WDR92Q96MX6 357 aa6.68□□□□□ -1.34
LTN1-204ENST00000475344 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.68□□□□□ -1.34
LTN1-204ENST00000475344 AKAP8O43823 692 aaKnown RBP6.67□□□□□ -1.34
LTN1-204ENST00000475344 GDF5P43026 501 aa6.67□□□□□ -1.34
LTN1-204ENST00000475344 ADCY7P51828 1080 aa6.67□□□□□ -1.34
LTN1-204ENST00000475344 KPNA1P52294 538 aaPredicted RBP6.67□□□□□ -1.34
LTN1-204ENST00000475344 CRIP3Q6Q6R5 217 aa6.67□□□□□ -1.34
LTN1-204ENST00000475344 MAMDC4Q6UXC1 1216 aa6.67□□□□□ -1.34
LTN1-204ENST00000475344 UNQ6494/PRO21346Q6UXR6 183 aa6.67□□□□□ -1.34
LTN1-204ENST00000475344 RNF207Q6ZRF8 634 aa6.67□□□□□ -1.34
LTN1-204ENST00000475344 C1orf210Q8IVY1 113 aa6.67□□□□□ -1.34
LTN1-204ENST00000475344 ZZZ3Q8IYH5 903 aa6.67□□□□□ -1.34
LTN1-204ENST00000475344 RABGGTAQ92696 567 aa6.67□□□□□ -1.34
LTN1-204ENST00000475344 TARS2Q9BW92 718 aaKnown RBP6.67□□□□□ -1.34
LTN1-204ENST00000475344 SCAND2PQ9GZW5 306 aaPredicted RBP6.67□□□□□ -1.34
LTN1-204ENST00000475344 MTFR1LQ9H019 292 aa6.67□□□□□ -1.34
LTN1-204ENST00000475344 SLC6A15Q9H2J7 730 aa6.67□□□□□ -1.34
LTN1-204ENST00000475344 MTG2Q9H4K7 406 aa6.67□□□□□ -1.34
LTN1-204ENST00000475344 NCDNQ9UBB6 729 aa6.67□□□□□ -1.34
LTN1-204ENST00000475344 SYNPO2Q9UMS6 1093 aa6.67□□□□□ -1.34
LTN1-204ENST00000475344 HS3ST3A1Q9Y663 406 aa6.67□□□□□ -1.34
LTN1-204ENST00000475344 FAM83GA6ND36 823 aa6.66□□□□□ -1.34
LTN1-204ENST00000475344 DAPK3O43293 454 aa6.66□□□□□ -1.34
LTN1-204ENST00000475344 HNRNPLP14866 589 aaKnown RBP eCLIP6.66□□□□□ -1.34
LTN1-204ENST00000475344 CD40P25942 277 aa6.66□□□□□ -1.34
LTN1-204ENST00000475344 SCNN1BP51168 640 aa6.66□□□□□ -1.34
LTN1-204ENST00000475344 DSG1Q02413 1049 aa6.66□□□□□ -1.34
LTN1-204ENST00000475344 GAREM2Q75VX8 874 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms