RNA–Protein interactions for RNA: ENST00000474852.1

TPR-205, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 1 (best)

Gene TPR, Length 2,757 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-205ENST00000474852 C18orf8Q96DM3 657 aa17.7■□□□□ 0.42
TPR-205ENST00000474852 ERP44Q9BS26 406 aa17.7■□□□□ 0.42
TPR-205ENST00000474852 CDCA7Q9BWT1 371 aaPredicted RBP17.7■□□□□ 0.42
TPR-205ENST00000474852 EPB41L4BQ9H329 900 aa17.7■□□□□ 0.42
TPR-205ENST00000474852 KCNMB3Q9NPA1 279 aa17.7■□□□□ 0.42
TPR-205ENST00000474852 NENFQ9UMX5 172 aa17.7■□□□□ 0.42
TPR-205ENST00000474852 ATAD5Q96QE3 1844 aa17.7■□□□□ 0.42
TPR-205ENST00000474852 LRRN2O75325 713 aa17.69■□□□□ 0.42
TPR-205ENST00000474852 NOVP48745 357 aa17.69■□□□□ 0.42
TPR-205ENST00000474852 CCDC38Q502W7 563 aa17.69■□□□□ 0.42
TPR-205ENST00000474852 HOOK3Q86VS8 718 aa17.69■□□□□ 0.42
TPR-205ENST00000474852 NEK9Q8TD19 979 aa17.69■□□□□ 0.42
TPR-205ENST00000474852 TCP11Q8WWU5 503 aa17.69■□□□□ 0.42
TPR-205ENST00000474852 RNF25Q96BH1 459 aaPredicted RBP17.69■□□□□ 0.42
TPR-205ENST00000474852 ELAC2Q9BQ52 826 aaKnown RBP17.69■□□□□ 0.42
TPR-205ENST00000474852 RUSC1Q9BVN2 902 aa17.69■□□□□ 0.42
TPR-205ENST00000474852 THAP2Q9H0W7 228 aa17.69■□□□□ 0.42
TPR-205ENST00000474852 PITPNM2Q9BZ72 1349 aa17.69■□□□□ 0.42
TPR-205ENST00000474852 PDXKO00764 312 aa17.69■□□□□ 0.42
TPR-205ENST00000474852 DDX3YO15523 660 aaKnown RBP17.69■□□□□ 0.42
TPR-205ENST00000474852 VIMP08670 466 aaKnown RBP17.69■□□□□ 0.42
TPR-205ENST00000474852 PTENP60484 403 aa17.69■□□□□ 0.42
TPR-205ENST00000474852 DRAP1Q14919 205 aaPredicted RBP17.69■□□□□ 0.42
TPR-205ENST00000474852 LLGL1Q15334 1064 aa17.69■□□□□ 0.42
TPR-205ENST00000474852 QRICH1Q2TAL8 776 aa17.69■□□□□ 0.42
TPR-205ENST00000474852 PPP1R18Q6NYC8 613 aa17.69■□□□□ 0.42
TPR-205ENST00000474852 ARMC9Q7Z3E5 817 aa17.69■□□□□ 0.42
TPR-205ENST00000474852 LRRC34Q8IZ02 419 aa17.69■□□□□ 0.42
TPR-205ENST00000474852 ALG3Q92685 438 aa17.69■□□□□ 0.42
TPR-205ENST00000474852 PRMT1Q99873 361 aaKnown RBP17.69■□□□□ 0.42
TPR-205ENST00000474852 DDX4Q9NQI0 724 aaKnown RBP17.69■□□□□ 0.42
TPR-205ENST00000474852 CD2APQ9Y5K6 639 aa17.69■□□□□ 0.42
TPR-205ENST00000474852 A0A0A6YYK5 440 aaPredicted RBP17.68■□□□□ 0.42
TPR-205ENST00000474852 CCDC189A1A4V9 331 aa17.68■□□□□ 0.42
TPR-205ENST00000474852 FERP16591 822 aa17.68■□□□□ 0.42
TPR-205ENST00000474852 FGFR4P22455 802 aa17.68■□□□□ 0.42
TPR-205ENST00000474852 COG2Q14746 738 aa17.68■□□□□ 0.42
TPR-205ENST00000474852 ZC2HC1CQ53FD0 456 aaPredicted RBP17.68■□□□□ 0.42
TPR-205ENST00000474852 PNMA8AQ86V59 439 aaPredicted RBP17.68■□□□□ 0.42
TPR-205ENST00000474852 JAMLQ86YT9 394 aa17.68■□□□□ 0.42
TPR-205ENST00000474852 RFFLQ8WZ73 363 aa17.68■□□□□ 0.42
TPR-205ENST00000474852 P2RX7Q99572 595 aaKnown RBP17.68■□□□□ 0.42
TPR-205ENST00000474852 SEMA4AQ9H3S1 761 aa17.68■□□□□ 0.42
TPR-205ENST00000474852 CNOT10Q9H9A5 744 aaKnown RBP17.68■□□□□ 0.42
TPR-205ENST00000474852 ZDHHC18Q9NUE0 388 aa17.68■□□□□ 0.42
TPR-205ENST00000474852 TYW1Q9NV66 732 aaKnown RBP17.68■□□□□ 0.42
TPR-205ENST00000474852 ATF5Q9Y2D1 282 aaPredicted RBP17.68■□□□□ 0.42
TPR-205ENST00000474852 GOLGA6L10A0A0M3HER8 536 aa17.68■□□□□ 0.42
TPR-205ENST00000474852 RGS16O15492 202 aaPredicted RBP17.68■□□□□ 0.42
TPR-205ENST00000474852 PPP1R12BO60237 982 aaPredicted RBP17.68■□□□□ 0.42
TPR-205ENST00000474852 TBCAO75347 108 aaKnown RBP17.68■□□□□ 0.42
TPR-205ENST00000474852 CLTAP09496 248 aa17.68■□□□□ 0.42
TPR-205ENST00000474852 TRIM49P0CI25 452 aa17.68■□□□□ 0.42
TPR-205ENST00000474852 TRIM49CP0CI26 452 aa17.68■□□□□ 0.42
TPR-205ENST00000474852 SPATA31C1P0DKV0 1188 aa17.68■□□□□ 0.42
TPR-205ENST00000474852 SHROOM1Q2M3G4 852 aaPredicted RBP17.68■□□□□ 0.42
TPR-205ENST00000474852 DUPD1Q68J44 220 aa17.68■□□□□ 0.42
TPR-205ENST00000474852 EPS8L3Q8TE67 593 aaKnown RBP17.68■□□□□ 0.42
TPR-205ENST00000474852 PIGOQ8TEQ8 1089 aa17.68■□□□□ 0.42
TPR-205ENST00000474852 DNAJC12Q9UKB3 198 aa17.68■□□□□ 0.42
TPR-205ENST00000474852 DAGLAQ9Y4D2 1042 aa17.68■□□□□ 0.42
TPR-205ENST00000474852 CCT8L1PA6NM43 557 aa17.68■□□□□ 0.42
TPR-205ENST00000474852 EZRP15311 586 aaKnown RBP17.68■□□□□ 0.42
TPR-205ENST00000474852 RPL13P26373 211 aaKnown RBP17.68■□□□□ 0.42
TPR-205ENST00000474852 NMT1P30419 496 aaKnown RBP17.68■□□□□ 0.42
TPR-205ENST00000474852 EIF3BP55884 814 aaKnown RBP17.68■□□□□ 0.42
TPR-205ENST00000474852 XRCC4Q13426 336 aa17.68■□□□□ 0.42
TPR-205ENST00000474852 USH1GQ495M9 461 aa17.68■□□□□ 0.42
TPR-205ENST00000474852 EPM2AIP1Q7L775 607 aaPredicted RBP17.68■□□□□ 0.42
TPR-205ENST00000474852 RPAINQ86UA6 219 aa17.68■□□□□ 0.42
TPR-205ENST00000474852 ZNF622Q969S3 477 aaKnown RBP eCLIP17.68■□□□□ 0.424e-11■■■□□ 14.6
TPR-205ENST00000474852 ZNF317Q96PQ6 595 aaPredicted RBP17.68■□□□□ 0.42
TPR-205ENST00000474852 PABPC3Q9H361 631 aaKnown RBP17.68■□□□□ 0.42
TPR-205ENST00000474852 RGL1Q9NZL6 768 aa17.68■□□□□ 0.42
TPR-205ENST00000474852 COG5Q9UP83 839 aa17.68■□□□□ 0.42
TPR-205ENST00000474852 FAM196BA6NMK8 535 aa17.67■□□□□ 0.42
TPR-205ENST00000474852 SOX5P35711 763 aa17.67■□□□□ 0.42
TPR-205ENST00000474852 MARCKSL1P49006 195 aa17.67■□□□□ 0.42
TPR-205ENST00000474852 SPIRE1Q08AE8 756 aa17.67■□□□□ 0.42
TPR-205ENST00000474852 PLS1Q14651 629 aa17.67■□□□□ 0.42
TPR-205ENST00000474852 LACTB2Q53H82 288 aaPredicted RBP17.67■□□□□ 0.42
TPR-205ENST00000474852 KIAA1755Q5JYT7 1200 aa17.67■□□□□ 0.42
TPR-205ENST00000474852 WLSQ5T9L3 541 aa17.67■□□□□ 0.42
TPR-205ENST00000474852 TBC1D1Q86TI0 1168 aaPredicted RBP17.67■□□□□ 0.42
TPR-205ENST00000474852 FAM186BQ8IYM0 893 aa17.67■□□□□ 0.42
TPR-205ENST00000474852 ANKS4BQ8N8V4 417 aa17.67■□□□□ 0.42
TPR-205ENST00000474852 SYT2Q8N9I0 419 aaPredicted RBP17.67■□□□□ 0.42
TPR-205ENST00000474852 RDH13Q8NBN7 331 aa17.67■□□□□ 0.42
TPR-205ENST00000474852 TXLNGYQ9BZA5 131 aa17.67■□□□□ 0.42
TPR-205ENST00000474852 ADAM7Q9H2U9 754 aa17.67■□□□□ 0.42
TPR-205ENST00000474852 INTS9Q9NV88 658 aaKnown RBP17.67■□□□□ 0.42
TPR-205ENST00000474852 CYP2J2P51589 502 aa17.67■□□□□ 0.42
TPR-205ENST00000474852 ELF3P78545 371 aaPredicted RBP17.67■□□□□ 0.42
TPR-205ENST00000474852 ARHGAP4P98171 946 aa17.67■□□□□ 0.42
TPR-205ENST00000474852 KLRC3Q07444 240 aa17.67■□□□□ 0.42
TPR-205ENST00000474852 NBPF9Q3BBW0 867 aa17.67■□□□□ 0.42
TPR-205ENST00000474852 CCDC25Q86WR0 208 aa17.67■□□□□ 0.42
TPR-205ENST00000474852 OLIG1Q8TAK6 271 aa17.67■□□□□ 0.42
TPR-205ENST00000474852 CYP2W1Q8TAV3 490 aa17.67■□□□□ 0.42
TPR-205ENST00000474852 MGARPQ8TDB4 240 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms