RNA–Protein interactions for RNA: ENST00000474648.5

COL8A1-206, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 5

Gene COL8A1, Length 841 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-206ENST00000474648 FRMD3A2A2Y4 597 aa11.11□□□□□ -0.63
COL8A1-206ENST00000474648 C17orf102A2RUQ5 167 aa11.11□□□□□ -0.63
COL8A1-206ENST00000474648 SFI1A8K8P3 1242 aa11.11□□□□□ -0.63
COL8A1-206ENST00000474648 RSPH10B2B2RC85 870 aa11.11□□□□□ -0.63
COL8A1-206ENST00000474648 MAGEB2O15479 319 aa11.11□□□□□ -0.63
COL8A1-206ENST00000474648 TREHO43280 583 aa11.11□□□□□ -0.63
COL8A1-206ENST00000474648 RSPH10BP0C881 870 aa11.11□□□□□ -0.63
COL8A1-206ENST00000474648 EN2P19622 333 aaPredicted RBP11.11□□□□□ -0.63
COL8A1-206ENST00000474648 ARL2P36404 184 aa11.11□□□□□ -0.63
COL8A1-206ENST00000474648 ZNF131P52739 623 aa11.11□□□□□ -0.63
COL8A1-206ENST00000474648 PTPN11Q06124 597 aaPredicted RBP11.11□□□□□ -0.63
COL8A1-206ENST00000474648 RAD51AP2Q09MP3 1159 aa11.11□□□□□ -0.63
COL8A1-206ENST00000474648 TBC1D8BQ0IIM8 1120 aa11.11□□□□□ -0.63
COL8A1-206ENST00000474648 DRP2Q13474 957 aa11.11□□□□□ -0.63
COL8A1-206ENST00000474648 EMC2Q15006 297 aa11.11□□□□□ -0.63
COL8A1-206ENST00000474648 CCDC183Q5T5S1 534 aa11.11□□□□□ -0.63
COL8A1-206ENST00000474648 NT5DC1Q5TFE4 455 aa11.11□□□□□ -0.63
COL8A1-206ENST00000474648 MAEAQ7L5Y9 396 aa11.11□□□□□ -0.63
COL8A1-206ENST00000474648 KIAA0319LQ8IZA0 1049 aa11.11□□□□□ -0.63
COL8A1-206ENST00000474648 DIS3LQ8TF46 1054 aaKnown RBP11.11□□□□□ -0.63
COL8A1-206ENST00000474648 TMEM143Q96AN5 459 aa11.11□□□□□ -0.63
COL8A1-206ENST00000474648 REEP2Q9BRK0 252 aa11.11□□□□□ -0.63
COL8A1-206ENST00000474648 NUP62CLQ9H1M0 184 aa11.11□□□□□ -0.63
COL8A1-206ENST00000474648 ATP6V0A4Q9HBG4 840 aa11.11□□□□□ -0.63
COL8A1-206ENST00000474648 GPRC5CQ9NQ84 441 aa11.11□□□□□ -0.63
COL8A1-206ENST00000474648 STARD7Q9NQZ5 370 aa11.11□□□□□ -0.63
COL8A1-206ENST00000474648 KIAA1468Q9P260 1216 aa11.11□□□□□ -0.63
COL8A1-206ENST00000474648 GTF2IRD1Q9UHL9 959 aa11.11□□□□□ -0.63
COL8A1-206ENST00000474648 TUBE1Q9UJT0 475 aa11.11□□□□□ -0.63
COL8A1-206ENST00000474648 PCDHA2Q9Y5H9 948 aa11.11□□□□□ -0.63
COL8A1-206ENST00000474648 A0A0U1RQG5 324 aaPredicted RBP11.1□□□□□ -0.63
COL8A1-206ENST00000474648 PVALEFA0A1B0GWK0 134 aa11.1□□□□□ -0.63
COL8A1-206ENST00000474648 ARVCFO00192 962 aa11.1□□□□□ -0.63
COL8A1-206ENST00000474648 HIP1RO75146 1068 aa11.1□□□□□ -0.63
COL8A1-206ENST00000474648 POLGP54098 1239 aaPredicted RBP11.1□□□□□ -0.63
COL8A1-206ENST00000474648 EHHADHQ08426 723 aa11.1□□□□□ -0.63
COL8A1-206ENST00000474648 FAM102BQ5T8I3 360 aa11.1□□□□□ -0.63
COL8A1-206ENST00000474648 IER5Q5VY09 327 aa11.1□□□□□ -0.63
COL8A1-206ENST00000474648 EFCAB12Q6NXP0 572 aa11.1□□□□□ -0.63
COL8A1-206ENST00000474648 SLC39A5Q6ZMH5 540 aa11.1□□□□□ -0.63
COL8A1-206ENST00000474648 RUFY4Q6ZNE9 571 aa11.1□□□□□ -0.63
COL8A1-206ENST00000474648 UNC13DQ70J99 1090 aa11.1□□□□□ -0.63
COL8A1-206ENST00000474648 UBE2Q1Q7Z7E8 422 aa11.1□□□□□ -0.63
COL8A1-206ENST00000474648 EXOC8Q8IYI6 725 aa11.1□□□□□ -0.63
COL8A1-206ENST00000474648 LRRC71Q8N4P6 559 aa11.1□□□□□ -0.63
COL8A1-206ENST00000474648 MCPH1Q8NEM0 835 aa11.1□□□□□ -0.63
COL8A1-206ENST00000474648 ASAP3Q8TDY4 903 aa11.1□□□□□ -0.63
COL8A1-206ENST00000474648 SLC7A3Q8WY07 619 aa11.1□□□□□ -0.63
COL8A1-206ENST00000474648 CCDC34Q96HJ3 373 aa11.1□□□□□ -0.63
COL8A1-206ENST00000474648 CCDC43Q96MW1 224 aaKnown RBP11.1□□□□□ -0.63
COL8A1-206ENST00000474648 JPH2Q9BR39 696 aaPredicted RBP11.1□□□□□ -0.63
COL8A1-206ENST00000474648 TIPINQ9BVW5 301 aa11.1□□□□□ -0.63
COL8A1-206ENST00000474648 SENP6Q9GZR1 1112 aaPredicted RBP11.1□□□□□ -0.63
COL8A1-206ENST00000474648 SUGCTQ9HAC7 445 aa11.1□□□□□ -0.63
COL8A1-206ENST00000474648 HOOK1Q9UJC3 728 aaKnown RBP11.1□□□□□ -0.63
COL8A1-206ENST00000474648 SCN10AQ9Y5Y9 1956 aa11.09□□□□□ -0.63
COL8A1-206ENST00000474648 SMIM35A0A1B0GVV1 85 aa11.09□□□□□ -0.63
COL8A1-206ENST00000474648 RPN1P04843 607 aaKnown RBP11.09□□□□□ -0.63
COL8A1-206ENST00000474648 KRT18P05783 430 aaKnown RBP11.09□□□□□ -0.63
COL8A1-206ENST00000474648 GNAT1P11488 350 aa11.09□□□□□ -0.63
COL8A1-206ENST00000474648 GLRA2P23416 452 aa11.09□□□□□ -0.63
COL8A1-206ENST00000474648 CLCN3P51790 818 aa11.09□□□□□ -0.63
COL8A1-206ENST00000474648 RTP1P59025 263 aa11.09□□□□□ -0.63
COL8A1-206ENST00000474648 ASIC1P78348 528 aa11.09□□□□□ -0.63
COL8A1-206ENST00000474648 KCNB1Q14721 858 aa11.09□□□□□ -0.63
COL8A1-206ENST00000474648 KMT5BQ4FZB7 885 aa11.09□□□□□ -0.63
COL8A1-206ENST00000474648 FAM47CQ5HY64 1035 aa11.09□□□□□ -0.63
COL8A1-206ENST00000474648 PRPF31Q8WWY3 499 aaKnown RBP11.09□□□□□ -0.63
COL8A1-206ENST00000474648 BSNDQ8WZ55 320 aa11.09□□□□□ -0.63
COL8A1-206ENST00000474648 WNT8BQ93098 351 aa11.09□□□□□ -0.63
COL8A1-206ENST00000474648 HPS3Q969F9 1004 aa11.09□□□□□ -0.63
COL8A1-206ENST00000474648 PAWRQ96IZ0 340 aaKnown RBP11.09□□□□□ -0.63
COL8A1-206ENST00000474648 GSDMAQ96QA5 445 aa11.09□□□□□ -0.63
COL8A1-206ENST00000474648 FIZ1Q96SL8 496 aa11.09□□□□□ -0.63
COL8A1-206ENST00000474648 SEZ6LQ9BYH1 1024 aa11.09□□□□□ -0.63
COL8A1-206ENST00000474648 TRPV6Q9H1D0 765 aa11.09□□□□□ -0.63
COL8A1-206ENST00000474648 POLR3FQ9H1D9 316 aaPredicted RBP11.09□□□□□ -0.63
COL8A1-206ENST00000474648 PANK4Q9NVE7 773 aa11.09□□□□□ -0.63
COL8A1-206ENST00000474648 SUCLA2Q9P2R7 463 aaPredicted RBP11.09□□□□□ -0.63
COL8A1-206ENST00000474648 MAN1B1Q9UKM7 699 aa11.09□□□□□ -0.63
COL8A1-206ENST00000474648 ODF2LQ9ULJ1 636 aa11.09□□□□□ -0.63
COL8A1-206ENST00000474648 GAS2O43903 313 aaKnown RBP11.08□□□□□ -0.64
COL8A1-206ENST00000474648 RHOBTB3O94955 611 aa11.08□□□□□ -0.64
COL8A1-206ENST00000474648 SMC2O95347 1197 aa11.08□□□□□ -0.64
COL8A1-206ENST00000474648 CYP2C9P11712 490 aa11.08□□□□□ -0.64
COL8A1-206ENST00000474648 PLS3P13797 630 aa11.08□□□□□ -0.64
COL8A1-206ENST00000474648 IDEP14735 1019 aa11.08□□□□□ -0.64
COL8A1-206ENST00000474648 BMP6P22004 513 aa11.08□□□□□ -0.64
COL8A1-206ENST00000474648 COASYQ13057 564 aa11.08□□□□□ -0.64
COL8A1-206ENST00000474648 SNX17Q15036 470 aa11.08□□□□□ -0.64
COL8A1-206ENST00000474648 PTGISQ16647 500 aa11.08□□□□□ -0.64
COL8A1-206ENST00000474648 TRIM71Q2Q1W2 868 aaKnown RBP11.08□□□□□ -0.64
COL8A1-206ENST00000474648 HERC4Q5GLZ8 1057 aaPredicted RBP11.08□□□□□ -0.64
COL8A1-206ENST00000474648 C1orf53Q5VUE5 145 aa11.08□□□□□ -0.64
COL8A1-206ENST00000474648 SERINC5Q86VE9 423 aa11.08□□□□□ -0.64
COL8A1-206ENST00000474648 KSR1Q8IVT5 923 aa11.08□□□□□ -0.64
COL8A1-206ENST00000474648 CCDC65Q8IXS2 484 aa11.08□□□□□ -0.64
COL8A1-206ENST00000474648 METTL13Q8N6R0 699 aa11.08□□□□□ -0.64
COL8A1-206ENST00000474648 RETREG2Q8NC44 543 aa11.08□□□□□ -0.64
COL8A1-206ENST00000474648 TCP11Q8WWU5 503 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms