RNA–Protein interactions for RNA: ENST00000474564.1

COL12A1-206, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 3

Gene COL12A1, Length 499 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-206ENST00000474564 SMIM10L2AP0DMW4 78 aa11.43□□□□□ -0.58
COL12A1-206ENST00000474564 SMIM10L2BP0DMW5 78 aa11.43□□□□□ -0.58
COL12A1-206ENST00000474564 ATP4AP20648 1035 aa11.43□□□□□ -0.58
COL12A1-206ENST00000474564 ACLYP53396 1101 aa11.43□□□□□ -0.58
COL12A1-206ENST00000474564 NCBP1Q09161 790 aaKnown RBP11.43□□□□□ -0.58
COL12A1-206ENST00000474564 STRN3Q13033 797 aa11.43□□□□□ -0.58
COL12A1-206ENST00000474564 COASYQ13057 564 aa11.43□□□□□ -0.58
COL12A1-206ENST00000474564 MORC3Q14149 939 aa11.43□□□□□ -0.58
COL12A1-206ENST00000474564 TARBP2Q15633 366 aaKnown RBP11.43□□□□□ -0.58
COL12A1-206ENST00000474564 ARSHQ5FYA8 562 aa11.43□□□□□ -0.58
COL12A1-206ENST00000474564 ISM2Q6H9L7 571 aa11.43□□□□□ -0.58
COL12A1-206ENST00000474564 TAF2Q6P1X5 1199 aa11.43□□□□□ -0.58
COL12A1-206ENST00000474564 NFRKBQ6P4R8 1299 aa11.43□□□□□ -0.58
COL12A1-206ENST00000474564 ZBTB8OSQ8IWT0 167 aa11.43□□□□□ -0.58
COL12A1-206ENST00000474564 MYOCDQ8IZQ8 938 aa11.43□□□□□ -0.58
COL12A1-206ENST00000474564 NME8Q8N427 588 aa11.43□□□□□ -0.58
COL12A1-206ENST00000474564 RNF214Q8ND24 703 aa11.43□□□□□ -0.58
COL12A1-206ENST00000474564 DEPTORQ8TB45 409 aa11.43□□□□□ -0.58
COL12A1-206ENST00000474564 ERCC4Q92889 916 aaPredicted RBP11.43□□□□□ -0.58
COL12A1-206ENST00000474564 DNAJC19Q96DA6 116 aa11.43□□□□□ -0.58
COL12A1-206ENST00000474564 DHTKD1Q96HY7 919 aaPredicted RBP11.43□□□□□ -0.58
COL12A1-206ENST00000474564 C2orf40Q9H1Z8 148 aa11.43□□□□□ -0.58
COL12A1-206ENST00000474564 KMT5AQ9NQR1 393 aa11.43□□□□□ -0.58
COL12A1-206ENST00000474564 STARD7Q9NQZ5 370 aa11.43□□□□□ -0.58
COL12A1-206ENST00000474564 OLFML3Q9NRN5 406 aa11.43□□□□□ -0.58
COL12A1-206ENST00000474564 SUCLA2Q9P2R7 463 aaPredicted RBP11.43□□□□□ -0.58
COL12A1-206ENST00000474564 TELO2Q9Y4R8 837 aa11.43□□□□□ -0.58
COL12A1-206ENST00000474564 NPHP3-ACAD11A0A0J9YXS1 232 aa11.42□□□□□ -0.58
COL12A1-206ENST00000474564 SFI1A8K8P3 1242 aa11.42□□□□□ -0.58
COL12A1-206ENST00000474564 HAS3O00219 553 aa11.42□□□□□ -0.58
COL12A1-206ENST00000474564 GCNT3O95395 438 aa11.42□□□□□ -0.58
COL12A1-206ENST00000474564 GJB1P08034 283 aa11.42□□□□□ -0.58
COL12A1-206ENST00000474564 CASP1P29466 404 aa11.42□□□□□ -0.58
COL12A1-206ENST00000474564 ZNF165P49910 485 aa11.42□□□□□ -0.58
COL12A1-206ENST00000474564 EFNA5P52803 228 aa11.42□□□□□ -0.58
COL12A1-206ENST00000474564 PEX3P56589 373 aa11.42□□□□□ -0.58
COL12A1-206ENST00000474564 PLCB2Q00722 1185 aa11.42□□□□□ -0.58
COL12A1-206ENST00000474564 NBPF20Q3BBV1 942 aa11.42□□□□□ -0.58
COL12A1-206ENST00000474564 LHX8Q68G74 356 aa11.42□□□□□ -0.58
COL12A1-206ENST00000474564 MTHFD1LQ6UB35 978 aa11.42□□□□□ -0.58
COL12A1-206ENST00000474564 HS2ST1Q7LGA3 356 aa11.42□□□□□ -0.58
COL12A1-206ENST00000474564 SFR1Q86XK3 245 aa11.42□□□□□ -0.58
COL12A1-206ENST00000474564 SYCP3Q8IZU3 236 aa11.42□□□□□ -0.58
COL12A1-206ENST00000474564 SPIRE2Q8WWL2 714 aa11.42□□□□□ -0.58
COL12A1-206ENST00000474564 ARMC5Q96C12 935 aa11.42□□□□□ -0.58
COL12A1-206ENST00000474564 HVCN1Q96D96 273 aa11.42□□□□□ -0.58
COL12A1-206ENST00000474564 SH2D3AQ9BRG2 576 aa11.42□□□□□ -0.58
COL12A1-206ENST00000474564 POLR3FQ9H1D9 316 aaPredicted RBP11.42□□□□□ -0.58
COL12A1-206ENST00000474564 TMEM206Q9H813 350 aa11.42□□□□□ -0.58
COL12A1-206ENST00000474564 SLC39A2Q9NP94 309 aa11.42□□□□□ -0.58
COL12A1-206ENST00000474564 PAK6Q9NQU5 681 aaPredicted RBP11.42□□□□□ -0.58
COL12A1-206ENST00000474564 SETD4Q9NVD3 440 aa11.42□□□□□ -0.58
COL12A1-206ENST00000474564 AKT3Q9Y243 479 aa11.42□□□□□ -0.58
COL12A1-206ENST00000474564 PCDHA2Q9Y5H9 948 aa11.42□□□□□ -0.58
COL12A1-206ENST00000474564 ZSWIM8A7E2V4 1837 aa11.42□□□□□ -0.58
COL12A1-206ENST00000474564 UBE4BO95155 1302 aa11.41□□□□□ -0.58
COL12A1-206ENST00000474564 A0A0U1RQG5 324 aaPredicted RBP11.41□□□□□ -0.58
COL12A1-206ENST00000474564 FRMD3A2A2Y4 597 aa11.41□□□□□ -0.58
COL12A1-206ENST00000474564 TMEM150BA6NC51 233 aa11.41□□□□□ -0.58
COL12A1-206ENST00000474564 LRRIQ4A6NIV6 560 aa11.41□□□□□ -0.58
COL12A1-206ENST00000474564 K7ENM7 598 aa11.41□□□□□ -0.58
COL12A1-206ENST00000474564 EIF3DO15371 548 aaKnown RBP eCLIP11.41□□□□□ -0.58
COL12A1-206ENST00000474564 TLR3O15455 904 aaKnown RBP11.41□□□□□ -0.58
COL12A1-206ENST00000474564 SGPL1O95470 568 aa11.41□□□□□ -0.58
COL12A1-206ENST00000474564 CYP2C9P11712 490 aa11.41□□□□□ -0.58
COL12A1-206ENST00000474564 ERCC5P28715 1186 aaPredicted RBP11.41□□□□□ -0.58
COL12A1-206ENST00000474564 NAMPTP43490 491 aa11.41□□□□□ -0.58
COL12A1-206ENST00000474564 PHKA2P46019 1235 aa11.41□□□□□ -0.58
COL12A1-206ENST00000474564 ZNF131P52739 623 aa11.41□□□□□ -0.58
COL12A1-206ENST00000474564 CACNB1Q02641 598 aaPredicted RBP11.41□□□□□ -0.58
COL12A1-206ENST00000474564 ITGA7Q13683 1181 aa11.41□□□□□ -0.58
COL12A1-206ENST00000474564 TMEM132AQ24JP5 1023 aa11.41□□□□□ -0.58
COL12A1-206ENST00000474564 ANO6Q4KMQ2 910 aa11.41□□□□□ -0.58
COL12A1-206ENST00000474564 APBB1IPQ7Z5R6 666 aaPredicted RBP11.41□□□□□ -0.58
COL12A1-206ENST00000474564 RHPN2Q8IUC4 686 aa11.41□□□□□ -0.58
COL12A1-206ENST00000474564 GUF1Q8N442 669 aaKnown RBP11.41□□□□□ -0.58
COL12A1-206ENST00000474564 ANKLE1Q8NAG6 615 aa11.41□□□□□ -0.58
COL12A1-206ENST00000474564 ANKRD20A12PQ8NF67 263 aa11.41□□□□□ -0.58
COL12A1-206ENST00000474564 GOLGA5Q8TBA6 731 aa11.41□□□□□ -0.58
COL12A1-206ENST00000474564 KAT2BQ92831 832 aa11.41□□□□□ -0.58
COL12A1-206ENST00000474564 TMEM143Q96AN5 459 aa11.41□□□□□ -0.58
COL12A1-206ENST00000474564 ZNF333Q96JL9 665 aa11.41□□□□□ -0.58
COL12A1-206ENST00000474564 ACCSQ96QU6 501 aa11.41□□□□□ -0.58
COL12A1-206ENST00000474564 NTPCRQ9BSD7 190 aaKnown RBP11.41□□□□□ -0.58
COL12A1-206ENST00000474564 INO80BQ9C086 356 aaPredicted RBP11.41□□□□□ -0.58
COL12A1-206ENST00000474564 TBC1D7Q9P0N9 293 aa11.41□□□□□ -0.58
COL12A1-206ENST00000474564 HDAC6Q9UBN7 1215 aa11.41□□□□□ -0.58
COL12A1-206ENST00000474564 OGDHLQ9ULD0 1010 aa11.41□□□□□ -0.58
COL12A1-206ENST00000474564 MROH7Q68CQ1 1323 aa11.4□□□□□ -0.58
COL12A1-206ENST00000474564 SMIM35A0A1B0GVV1 85 aa11.4□□□□□ -0.58
COL12A1-206ENST00000474564 MYADML2A6NDP7 307 aa11.4□□□□□ -0.58
COL12A1-206ENST00000474564 K7ERI5 159 aa11.4□□□□□ -0.58
COL12A1-206ENST00000474564 CALUO43852 315 aaPredicted RBP11.4□□□□□ -0.58
COL12A1-206ENST00000474564 KLRC4O43908 158 aa11.4□□□□□ -0.58
COL12A1-206ENST00000474564 C22orf31O95567 290 aa11.4□□□□□ -0.58
COL12A1-206ENST00000474564 TPM2P07951 284 aa11.4□□□□□ -0.58
COL12A1-206ENST00000474564 SRGAP2CP0DJJ0 459 aa11.4□□□□□ -0.58
COL12A1-206ENST00000474564 PTGS1P23219 599 aa11.4□□□□□ -0.58
COL12A1-206ENST00000474564 RPL13P26373 211 aaKnown RBP11.4□□□□□ -0.58
COL12A1-206ENST00000474564 ARL2P36404 184 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms