RNA–Protein interactions for RNA: ENST00000474330.1

CDHR3-210, Transcript of cadherin related family member 3, humanhuman

TSL 5

Gene CDHR3, Length 1,603 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-210ENST00000474330 DHX33Q9H6R0 707 aaKnown RBP22.49■■□□□ 1.19
CDHR3-210ENST00000474330 ATP6V0A4Q9HBG4 840 aa22.49■■□□□ 1.19
CDHR3-210ENST00000474330 ERAP1Q9NZ08 941 aa22.49■■□□□ 1.19
CDHR3-210ENST00000474330 TRIM49BA6NDI0 452 aa22.49■■□□□ 1.19
CDHR3-210ENST00000474330 DYNC1LI2O43237 492 aaPredicted RBP22.49■■□□□ 1.19
CDHR3-210ENST00000474330 MMP3P08254 477 aa22.49■■□□□ 1.19
CDHR3-210ENST00000474330 MAPTP10636 758 aaKnown RBP22.49■■□□□ 1.19
CDHR3-210ENST00000474330 PLS3P13797 630 aa22.49■■□□□ 1.19
CDHR3-210ENST00000474330 RFC5P40937 340 aa22.49■■□□□ 1.19
CDHR3-210ENST00000474330 CASP5P51878 434 aa22.49■■□□□ 1.19
CDHR3-210ENST00000474330 TPD52L1Q16890 204 aaPredicted RBP22.49■■□□□ 1.19
CDHR3-210ENST00000474330 FAM178BQ8IXR5 827 aa22.49■■□□□ 1.19
CDHR3-210ENST00000474330 KIFAP3Q92845 792 aa22.49■■□□□ 1.19
CDHR3-210ENST00000474330 XPNPEP1Q9NQW7 623 aa22.49■■□□□ 1.19
CDHR3-210ENST00000474330 SAMSN1Q9NSI8 373 aaKnown RBP22.49■■□□□ 1.19
CDHR3-210ENST00000474330 OGDHLQ9ULD0 1010 aa22.49■■□□□ 1.19
CDHR3-210ENST00000474330 ADCY5O95622 1261 aa22.48■■□□□ 1.19
CDHR3-210ENST00000474330 MARK3P27448 753 aa22.48■■□□□ 1.19
CDHR3-210ENST00000474330 BMT2Q1RMZ1 405 aa22.48■■□□□ 1.19
CDHR3-210ENST00000474330 FAM102BQ5T8I3 360 aa22.48■■□□□ 1.19
CDHR3-210ENST00000474330 ANKRD40Q6AI12 368 aa22.48■■□□□ 1.19
CDHR3-210ENST00000474330 ZNF720Q7Z2F6 126 aa22.48■■□□□ 1.19
CDHR3-210ENST00000474330 TLK2Q86UE8 772 aa22.48■■□□□ 1.19
CDHR3-210ENST00000474330 ZNF507Q8TCN5 953 aa22.48■■□□□ 1.19
CDHR3-210ENST00000474330 C16orf70Q9BSU1 422 aa22.48■■□□□ 1.19
CDHR3-210ENST00000474330 C17orf75Q9HAS0 396 aa22.48■■□□□ 1.19
CDHR3-210ENST00000474330 GPRC5CQ9NQ84 441 aa22.48■■□□□ 1.19
CDHR3-210ENST00000474330 A6NJR5 290 aa22.47■■□□□ 1.19
CDHR3-210ENST00000474330 EIF3DO15371 548 aaKnown RBP eCLIP22.47■■□□□ 1.19
CDHR3-210ENST00000474330 HBP1O60381 514 aa22.47■■□□□ 1.19
CDHR3-210ENST00000474330 GCNT3O95395 438 aa22.47■■□□□ 1.19
CDHR3-210ENST00000474330 MYBP10242 640 aa22.47■■□□□ 1.19
CDHR3-210ENST00000474330 CAPN2P17655 700 aa22.47■■□□□ 1.19
CDHR3-210ENST00000474330 CNGA1P29973 690 aa22.47■■□□□ 1.19
CDHR3-210ENST00000474330 POLGP54098 1239 aaPredicted RBP22.47■■□□□ 1.19
CDHR3-210ENST00000474330 RTP1P59025 263 aa22.47■■□□□ 1.19
CDHR3-210ENST00000474330 LRRC63Q05C16 580 aa22.47■■□□□ 1.19
CDHR3-210ENST00000474330 DGKDQ16760 1214 aa22.47■■□□□ 1.19
CDHR3-210ENST00000474330 CDKAL1Q5VV42 579 aa22.47■■□□□ 1.19
CDHR3-210ENST00000474330 DUSP9Q99956 384 aaKnown RBP22.47■■□□□ 1.19
CDHR3-210ENST00000474330 SEPT4O43236 478 aa22.46■■□□□ 1.19
CDHR3-210ENST00000474330 ATP1A3P13637 1013 aa22.46■■□□□ 1.19
CDHR3-210ENST00000474330 NMT1P30419 496 aaKnown RBP22.46■■□□□ 1.19
CDHR3-210ENST00000474330 EMC2Q15006 297 aa22.46■■□□□ 1.19
CDHR3-210ENST00000474330 STXBP4Q6ZWJ1 553 aa22.46■■□□□ 1.19
CDHR3-210ENST00000474330 SLC7A3Q8WY07 619 aa22.46■■□□□ 1.19
CDHR3-210ENST00000474330 TRIM5Q9C035 493 aa22.46■■□□□ 1.19
CDHR3-210ENST00000474330 MAFO75444 373 aaPredicted RBP22.46■■□□□ 1.19
CDHR3-210ENST00000474330 CCDC173Q0VFZ6 552 aa22.46■■□□□ 1.19
CDHR3-210ENST00000474330 EXOC8Q8IYI6 725 aa22.46■■□□□ 1.19
CDHR3-210ENST00000474330 SLC17A8Q8NDX2 589 aa22.46■■□□□ 1.19
CDHR3-210ENST00000474330 DIS3LQ8TF46 1054 aaKnown RBP22.46■■□□□ 1.19
CDHR3-210ENST00000474330 NOC3LQ8WTT2 800 aaKnown RBP22.46■■□□□ 1.19
CDHR3-210ENST00000474330 LENG1Q96BZ8 264 aaPredicted RBP22.46■■□□□ 1.19
CDHR3-210ENST00000474330 PDLIM2Q96JY6 352 aa22.46■■□□□ 1.19
CDHR3-210ENST00000474330 STRA6Q9BX79 667 aa22.46■■□□□ 1.19
CDHR3-210ENST00000474330 KCTD10Q9H3F6 313 aa22.46■■□□□ 1.19
CDHR3-210ENST00000474330 RNPEPQ9H4A4 650 aa22.46■■□□□ 1.19
CDHR3-210ENST00000474330 ST6GALNAC4Q9H4F1 302 aa22.46■■□□□ 1.19
CDHR3-210ENST00000474330 UBE4BO95155 1302 aa22.45■■□□□ 1.19
CDHR3-210ENST00000474330 ZBTB42B2RXF5 422 aa22.45■■□□□ 1.18
CDHR3-210ENST00000474330 PPP1R37O75864 691 aa22.45■■□□□ 1.18
CDHR3-210ENST00000474330 PRPF6O94906 941 aaKnown RBP22.45■■□□□ 1.18
CDHR3-210ENST00000474330 CDK11BP21127 795 aaKnown RBP22.45■■□□□ 1.18
CDHR3-210ENST00000474330 FANCCQ00597 558 aa22.45■■□□□ 1.18
CDHR3-210ENST00000474330 ALCAMQ13740 583 aa22.45■■□□□ 1.18
CDHR3-210ENST00000474330 KNOP1Q1ED39 458 aaKnown RBP22.45■■□□□ 1.18
CDHR3-210ENST00000474330 ZCWPW2Q504Y3 356 aa22.45■■□□□ 1.18
CDHR3-210ENST00000474330 NELFCDQ8IXH7 590 aa22.45■■□□□ 1.18
CDHR3-210ENST00000474330 CSGALNACT2Q8N6G5 542 aa22.45■■□□□ 1.18
CDHR3-210ENST00000474330 PPP1R9BQ96SB3 815 aa22.45■■□□□ 1.18
CDHR3-210ENST00000474330 TSG101Q99816 390 aa22.45■■□□□ 1.18
CDHR3-210ENST00000474330 NTPCRQ9BSD7 190 aaKnown RBP22.45■■□□□ 1.18
CDHR3-210ENST00000474330 THAP9Q9H5L6 903 aa22.45■■□□□ 1.18
CDHR3-210ENST00000474330 ZNF215Q9UL58 517 aaPredicted RBP22.45■■□□□ 1.18
CDHR3-210ENST00000474330 TRPC6Q9Y210 931 aa22.45■■□□□ 1.18
CDHR3-210ENST00000474330 PCDHB13Q9Y5F0 798 aa22.45■■□□□ 1.18
CDHR3-210ENST00000474330 H3BRB1 525 aa22.44■■□□□ 1.18
CDHR3-210ENST00000474330 DUSP11O75319 330 aaKnown RBP22.44■■□□□ 1.18
CDHR3-210ENST00000474330 HOXD13P35453 343 aa22.44■■□□□ 1.18
CDHR3-210ENST00000474330 PEX3P56589 373 aa22.44■■□□□ 1.18
CDHR3-210ENST00000474330 ANKLE1Q8NAG6 615 aa22.44■■□□□ 1.18
CDHR3-210ENST00000474330 SPIRE2Q8WWL2 714 aa22.44■■□□□ 1.18
CDHR3-210ENST00000474330 PAWRQ96IZ0 340 aaKnown RBP22.44■■□□□ 1.18
CDHR3-210ENST00000474330 SRRTQ9BXP5 876 aaKnown RBP22.44■■□□□ 1.18
CDHR3-210ENST00000474330 AP5M1Q9H0R1 490 aa22.44■■□□□ 1.18
CDHR3-210ENST00000474330 TUT1Q9H6E5 874 aaKnown RBP22.44■■□□□ 1.18
CDHR3-210ENST00000474330 KCNG1Q9UIX4 513 aa22.44■■□□□ 1.18
CDHR3-210ENST00000474330 ALPK3Q96L96 1907 aa22.43■■□□□ 1.18
CDHR3-210ENST00000474330 ZNF286BP0CG31 522 aa22.43■■□□□ 1.18
CDHR3-210ENST00000474330 CPT1AP50416 773 aa22.43■■□□□ 1.18
CDHR3-210ENST00000474330 ZNF75DP51815 510 aa22.43■■□□□ 1.18
CDHR3-210ENST00000474330 NCKAP1LP55160 1127 aa22.43■■□□□ 1.18
CDHR3-210ENST00000474330 TBC1D8BQ0IIM8 1120 aa22.43■■□□□ 1.18
CDHR3-210ENST00000474330 DMP1Q13316 513 aaPredicted RBP22.43■■□□□ 1.18
CDHR3-210ENST00000474330 HSP90AA4PQ58FG1 418 aa22.43■■□□□ 1.18
CDHR3-210ENST00000474330 ZNF484Q5JVG2 852 aa22.43■■□□□ 1.18
CDHR3-210ENST00000474330 PPP4R3CPQ6ZMV5 832 aa22.43■■□□□ 1.18
CDHR3-210ENST00000474330 DDX20Q9UHI6 824 aaKnown RBP22.43■■□□□ 1.18
CDHR3-210ENST00000474330 IGKV6-21A0A0C4DH24 114 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms