RNA–Protein interactions for RNA: ENST00000474309.1

EXOSC1-207, Transcript of exosome component 1, humanhuman

TSL 5

Gene EXOSC1, Length 260 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-207ENST00000474309 A0A0U1RQF3 1178 aa13.05□□□□□ -0.32
EXOSC1-207ENST00000474309 CCDC196A0A1B0GTZ2 297 aa13.05□□□□□ -0.32
EXOSC1-207ENST00000474309 CARNS1A5YM72 827 aa13.05□□□□□ -0.32
EXOSC1-207ENST00000474309 HIDE1A8MVS5 230 aa13.05□□□□□ -0.32
EXOSC1-207ENST00000474309 NLRP11P59045 1033 aaKnown RBP13.05□□□□□ -0.32
EXOSC1-207ENST00000474309 CDC42EP1Q00587 391 aa13.05□□□□□ -0.32
EXOSC1-207ENST00000474309 BMS1Q14692 1282 aaKnown RBP13.05□□□□□ -0.32
EXOSC1-207ENST00000474309 JAKMIP3Q5VZ66 844 aa13.05□□□□□ -0.32
EXOSC1-207ENST00000474309 ABI1Q8IZP0 508 aa13.05□□□□□ -0.32
EXOSC1-207ENST00000474309 LRRC43Q8N309 656 aa13.05□□□□□ -0.32
EXOSC1-207ENST00000474309 MRPL43Q8N983 215 aaKnown RBP13.05□□□□□ -0.32
EXOSC1-207ENST00000474309 CCDC12Q8WUD4 166 aaPredicted RBP13.05□□□□□ -0.32
EXOSC1-207ENST00000474309 MAP7D2Q96T17 732 aa13.05□□□□□ -0.32
EXOSC1-207ENST00000474309 ADAM7Q9H2U9 754 aa13.05□□□□□ -0.32
EXOSC1-207ENST00000474309 C6orf50Q9HD87 102 aa13.05□□□□□ -0.32
EXOSC1-207ENST00000474309 ENTPD7Q9NQZ7 604 aa13.05□□□□□ -0.32
EXOSC1-207ENST00000474309 TCEAL9Q9UHQ7 104 aa13.05□□□□□ -0.32
EXOSC1-207ENST00000474309 KMT2EQ8IZD2 1858 aa13.05□□□□□ -0.32
EXOSC1-207ENST00000474309 GOLGA8AA7E2F4 631 aa13.04□□□□□ -0.32
EXOSC1-207ENST00000474309 GOLGA8BA8MQT2 603 aa13.04□□□□□ -0.32
EXOSC1-207ENST00000474309 HMGB1P09429 215 aaKnown RBP13.04□□□□□ -0.32
EXOSC1-207ENST00000474309 GNA11P29992 359 aa13.04□□□□□ -0.32
EXOSC1-207ENST00000474309 CDC27P30260 824 aa13.04□□□□□ -0.32
EXOSC1-207ENST00000474309 APOBRQ0VD83 1088 aa13.04□□□□□ -0.32
EXOSC1-207ENST00000474309 KRT32Q14532 448 aa13.04□□□□□ -0.32
EXOSC1-207ENST00000474309 SMC1AQ14683 1233 aaKnown RBP13.04□□□□□ -0.32
EXOSC1-207ENST00000474309 CES5AQ6NT32 575 aa13.04□□□□□ -0.32
EXOSC1-207ENST00000474309 ZNF598Q86UK7 904 aaKnown RBP13.04□□□□□ -0.32
EXOSC1-207ENST00000474309 UBALD2Q8IYN6 164 aa13.04□□□□□ -0.32
EXOSC1-207ENST00000474309 SLC39A11Q8N1S5 342 aa13.04□□□□□ -0.32
EXOSC1-207ENST00000474309 CHST12Q9NRB3 414 aa13.04□□□□□ -0.32
EXOSC1-207ENST00000474309 GABBR1Q9UBS5 961 aa13.04□□□□□ -0.32
EXOSC1-207ENST00000474309 AKT3Q9Y243 479 aa13.04□□□□□ -0.32
EXOSC1-207ENST00000474309 ZFHX2Q9C0A1 2572 aaPredicted RBP13.03□□□□□ -0.32
EXOSC1-207ENST00000474309 C2orf71A6NGG8 1288 aa13.03□□□□□ -0.32
EXOSC1-207ENST00000474309 PROB1E7EW31 1015 aa13.03□□□□□ -0.32
EXOSC1-207ENST00000474309 DARSP14868 501 aaKnown RBP13.03□□□□□ -0.32
EXOSC1-207ENST00000474309 ADD1P35611 737 aaKnown RBP13.03□□□□□ -0.32
EXOSC1-207ENST00000474309 MTHFRP42898 656 aa13.03□□□□□ -0.32
EXOSC1-207ENST00000474309 ALDH7A1P49419 539 aaKnown RBP13.03□□□□□ -0.32
EXOSC1-207ENST00000474309 CLCN3P51790 818 aa13.03□□□□□ -0.32
EXOSC1-207ENST00000474309 VCPP55072 806 aaKnown RBP13.03□□□□□ -0.32
EXOSC1-207ENST00000474309 ZBTB33Q86T24 672 aa13.03□□□□□ -0.32
EXOSC1-207ENST00000474309 PPP1R16BQ96T49 567 aa13.03□□□□□ -0.32
EXOSC1-207ENST00000474309 TRAIPQ9BWF2 469 aa13.03□□□□□ -0.32
EXOSC1-207ENST00000474309 MRPL9Q9BYD2 267 aaKnown RBP13.03□□□□□ -0.32
EXOSC1-207ENST00000474309 DACT1Q9NYF0 836 aa13.03□□□□□ -0.32
EXOSC1-207ENST00000474309 SORCS3Q9UPU3 1222 aa13.03□□□□□ -0.32
EXOSC1-207ENST00000474309 HCFC2Q9Y5Z7 792 aa13.03□□□□□ -0.32
EXOSC1-207ENST00000474309 IRAK3Q9Y616 596 aa13.03□□□□□ -0.32
EXOSC1-207ENST00000474309 KLF18A0A0U1RQI7 1052 aa13.02□□□□□ -0.33
EXOSC1-207ENST00000474309 WDR64B1ANS9 1081 aa13.02□□□□□ -0.33
EXOSC1-207ENST00000474309 PRPF3O43395 683 aaKnown RBP13.02□□□□□ -0.33
EXOSC1-207ENST00000474309 GALR2O43603 387 aaPredicted RBP13.02□□□□□ -0.33
EXOSC1-207ENST00000474309 CLASP2O75122 1294 aaKnown RBP13.02□□□□□ -0.33
EXOSC1-207ENST00000474309 CXCL14O95715 111 aa13.02□□□□□ -0.33
EXOSC1-207ENST00000474309 GPC3P51654 580 aa13.02□□□□□ -0.33
EXOSC1-207ENST00000474309 GIT2Q14161 759 aa13.02□□□□□ -0.33
EXOSC1-207ENST00000474309 PRR16Q569H4 304 aa13.02□□□□□ -0.33
EXOSC1-207ENST00000474309 CLLU1OSQ5K130 101 aa13.02□□□□□ -0.33
EXOSC1-207ENST00000474309 LLGL2Q6P1M3 1020 aa13.02□□□□□ -0.33
EXOSC1-207ENST00000474309 TRMT1LQ7Z2T5 733 aaKnown RBP13.02□□□□□ -0.33
EXOSC1-207ENST00000474309 REXO1Q8N1G1 1221 aaKnown RBP13.02□□□□□ -0.33
EXOSC1-207ENST00000474309 PLCD3Q8N3E9 789 aa13.02□□□□□ -0.33
EXOSC1-207ENST00000474309 KREMEN2Q8NCW0 462 aa13.02□□□□□ -0.33
EXOSC1-207ENST00000474309 BICD2Q8TD16 824 aa13.02□□□□□ -0.33
EXOSC1-207ENST00000474309 ATOH1Q92858 354 aaPredicted RBP13.02□□□□□ -0.33
EXOSC1-207ENST00000474309 YTHDC1Q96MU7 727 aaKnown RBP13.02□□□□□ -0.33
EXOSC1-207ENST00000474309 RIT2Q99578 217 aa13.02□□□□□ -0.33
EXOSC1-207ENST00000474309 DISC1Q9NRI5 854 aa13.02□□□□□ -0.33
EXOSC1-207ENST00000474309 SAMM50Q9Y512 469 aa13.02□□□□□ -0.33
EXOSC1-207ENST00000474309 ZNF862O60290 1169 aa13.01□□□□□ -0.33
EXOSC1-207ENST00000474309 GFRA3O60609 400 aa13.01□□□□□ -0.33
EXOSC1-207ENST00000474309 OATP04181 439 aa13.01□□□□□ -0.33
EXOSC1-207ENST00000474309 SKIP12755 728 aa13.01□□□□□ -0.33
EXOSC1-207ENST00000474309 SFNP31947 248 aa13.01□□□□□ -0.33
EXOSC1-207ENST00000474309 METAP2P50579 478 aaKnown RBP eCLIP13.01□□□□□ -0.33
EXOSC1-207ENST00000474309 USP11P51784 963 aa13.01□□□□□ -0.33
EXOSC1-207ENST00000474309 POLGP54098 1239 aaPredicted RBP13.01□□□□□ -0.33
EXOSC1-207ENST00000474309 MTMR3Q13615 1198 aa13.01□□□□□ -0.33
EXOSC1-207ENST00000474309 TARBP2Q15633 366 aaKnown RBP13.01□□□□□ -0.33
EXOSC1-207ENST00000474309 ADCK5Q3MIX3 580 aa13.01□□□□□ -0.33
EXOSC1-207ENST00000474309 ATAT1Q5SQI0 421 aa13.01□□□□□ -0.33
EXOSC1-207ENST00000474309 RASEFQ8IZ41 740 aa13.01□□□□□ -0.33
EXOSC1-207ENST00000474309 ZDHHC14Q8IZN3 488 aa13.01□□□□□ -0.33
EXOSC1-207ENST00000474309 LENG9Q96B70 501 aa13.01□□□□□ -0.33
EXOSC1-207ENST00000474309 SNX27Q96L92 541 aa13.01□□□□□ -0.33
EXOSC1-207ENST00000474309 TCEANC2Q96MN5 208 aa13.01□□□□□ -0.33
EXOSC1-207ENST00000474309 APOL5Q9BWW9 433 aa13.01□□□□□ -0.33
EXOSC1-207ENST00000474309 INO80BQ9C086 356 aaPredicted RBP13.01□□□□□ -0.33
EXOSC1-207ENST00000474309 POMKQ9H5K3 350 aa13.01□□□□□ -0.33
EXOSC1-207ENST00000474309 USTQ9Y2C2 406 aa13.01□□□□□ -0.33
EXOSC1-207ENST00000474309 C2CD4DB7Z1M9 353 aa13□□□□□ -0.33
EXOSC1-207ENST00000474309 PBX3P40426 434 aa13□□□□□ -0.33
EXOSC1-207ENST00000474309 JAK3P52333 1124 aa13□□□□□ -0.33
EXOSC1-207ENST00000474309 BCAR1P56945 870 aa13□□□□□ -0.33
EXOSC1-207ENST00000474309 TBC1D8BQ0IIM8 1120 aa13□□□□□ -0.33
EXOSC1-207ENST00000474309 BMP2KLQ5H9B9 411 aa13□□□□□ -0.33
EXOSC1-207ENST00000474309 DDX53Q86TM3 631 aaKnown RBP13□□□□□ -0.33
EXOSC1-207ENST00000474309 FBXL16Q8N461 479 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms