RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 KCNJ6P48051 423 aa3.05□□□□□ -1.92
CALD1-216ENST00000473714 NEK4P51957 841 aa3.05□□□□□ -1.92
CALD1-216ENST00000473714 DDR1Q08345 913 aa3.05□□□□□ -1.92
CALD1-216ENST00000473714 FAM50AQ14320 339 aaKnown RBP3.05□□□□□ -1.92
CALD1-216ENST00000473714 KIR3DS1Q14943 382 aa3.05□□□□□ -1.92
CALD1-216ENST00000473714 LONRF2Q1L5Z9 754 aa3.05□□□□□ -1.92
CALD1-216ENST00000473714 SLC4A8Q2Y0W8 1093 aa3.05□□□□□ -1.92
CALD1-216ENST00000473714 SLC10A6Q3KNW5 377 aa3.05□□□□□ -1.92
CALD1-216ENST00000473714 VWA3BQ502W6 1294 aa3.05□□□□□ -1.92
CALD1-216ENST00000473714 TMEM201Q5SNT2 666 aa3.05□□□□□ -1.92
CALD1-216ENST00000473714 ODR4Q5SWX8 454 aa3.05□□□□□ -1.92
CALD1-216ENST00000473714 CDCP2Q5VXM1 449 aa3.05□□□□□ -1.92
CALD1-216ENST00000473714 TDRD10Q5VZ19 366 aaKnown RBP3.05□□□□□ -1.92
CALD1-216ENST00000473714 UBE2Q1Q7Z7E8 422 aa3.05□□□□□ -1.92
CALD1-216ENST00000473714 MCATQ8IVS2 390 aaKnown RBP3.05□□□□□ -1.92
CALD1-216ENST00000473714 CRACR2BQ8N4Y2 399 aaPredicted RBP3.05□□□□□ -1.92
CALD1-216ENST00000473714 LINC00116Q8NCU8 138 aa3.05□□□□□ -1.92
CALD1-216ENST00000473714 FNIP1Q8TF40 1166 aa3.05□□□□□ -1.92
CALD1-216ENST00000473714 RNF141Q8WVD5 230 aa3.05□□□□□ -1.92
CALD1-216ENST00000473714 SMARCC1Q92922 1105 aaPredicted RBP3.05□□□□□ -1.92
CALD1-216ENST00000473714 NINJ1Q92982 152 aa3.05□□□□□ -1.92
CALD1-216ENST00000473714 SGSM3Q96HU1 749 aa3.05□□□□□ -1.92
CALD1-216ENST00000473714 PLCD4Q9BRC7 762 aa3.05□□□□□ -1.92
CALD1-216ENST00000473714 DHRS4Q9BTZ2 278 aa3.05□□□□□ -1.92
CALD1-216ENST00000473714 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP3.05□□□□□ -1.92
CALD1-216ENST00000473714 ASCC2Q9H1I8 757 aaPredicted RBP3.05□□□□□ -1.92
CALD1-216ENST00000473714 VPS11Q9H270 941 aa3.05□□□□□ -1.92
CALD1-216ENST00000473714 EPHX3Q9H6B9 360 aa3.05□□□□□ -1.92
CALD1-216ENST00000473714 CAAP1Q9H8G2 361 aa3.05□□□□□ -1.92
CALD1-216ENST00000473714 PGAP2Q9UHJ9 254 aa3.05□□□□□ -1.92
CALD1-216ENST00000473714 HS3ST3A1Q9Y663 406 aa3.05□□□□□ -1.92
CALD1-216ENST00000473714 TAF6LQ9Y6J9 622 aa3.05□□□□□ -1.92
CALD1-216ENST00000473714 PMF1-BGLAPU3KQ54 211 aa3.05□□□□□ -1.92
CALD1-216ENST00000473714 MYH14Q7Z406 1995 aaKnown RBP3.05□□□□□ -1.92
CALD1-216ENST00000473714 TCF20Q9UGU0 1960 aaKnown RBP3.05□□□□□ -1.92
CALD1-216ENST00000473714 SLX4Q8IY92 1834 aa3.05□□□□□ -1.92
CALD1-216ENST00000473714 ALPK3Q96L96 1907 aa3.04□□□□□ -1.92
CALD1-216ENST00000473714 TRBV23-1A0A0A0MS06 115 aa3.04□□□□□ -1.92
CALD1-216ENST00000473714 SH3D21A4FU49 640 aa3.04□□□□□ -1.92
CALD1-216ENST00000473714 FZD9O00144 591 aa3.04□□□□□ -1.92
CALD1-216ENST00000473714 POLRMTO00411 1230 aaKnown RBP3.04□□□□□ -1.92
CALD1-216ENST00000473714 TNFRSF10CO14798 259 aa3.04□□□□□ -1.92
CALD1-216ENST00000473714 PRODHO43272 600 aa3.04□□□□□ -1.92
CALD1-216ENST00000473714 PDE8AO60658 829 aa3.04□□□□□ -1.92
CALD1-216ENST00000473714 AMHP03971 560 aa3.04□□□□□ -1.92
CALD1-216ENST00000473714 PDGFRBP09619 1106 aa3.04□□□□□ -1.92
CALD1-216ENST00000473714 ACRP10323 421 aa3.04□□□□□ -1.92
CALD1-216ENST00000473714 FLT3P36888 993 aa3.04□□□□□ -1.92
CALD1-216ENST00000473714 CCNFP41002 786 aa3.04□□□□□ -1.92
CALD1-216ENST00000473714 EPS15P42566 896 aa3.04□□□□□ -1.92
CALD1-216ENST00000473714 TM4SF4P48230 202 aa3.04□□□□□ -1.92
CALD1-216ENST00000473714 ZNF143P52747 638 aaPredicted RBP3.04□□□□□ -1.92
CALD1-216ENST00000473714 PMS1P54277 932 aaKnown RBP3.04□□□□□ -1.92
CALD1-216ENST00000473714 CYP4F8P98187 520 aa3.04□□□□□ -1.92
CALD1-216ENST00000473714 AMPD3Q01432 767 aa3.04□□□□□ -1.92
CALD1-216ENST00000473714 PABPC4Q13310 644 aaKnown RBP eCLIP3.04□□□□□ -1.92
CALD1-216ENST00000473714 CBX2Q14781 532 aaPredicted RBP3.04□□□□□ -1.92
CALD1-216ENST00000473714 SART3Q15020 963 aaKnown RBP3.04□□□□□ -1.92
CALD1-216ENST00000473714 MRM1Q6IN84 353 aaKnown RBP3.04□□□□□ -1.92
CALD1-216ENST00000473714 POMZP3Q6PJE2 187 aa3.04□□□□□ -1.92
CALD1-216ENST00000473714 NSMFQ6X4W1 530 aa3.04□□□□□ -1.92
CALD1-216ENST00000473714 ZPBP2Q6X784 338 aa3.04□□□□□ -1.92
CALD1-216ENST00000473714 DDX46Q7L014 1031 aaKnown RBP3.04□□□□□ -1.92
CALD1-216ENST00000473714 SCUBE1Q8IWY4 988 aa3.04□□□□□ -1.92
CALD1-216ENST00000473714 UBR7Q8N806 425 aa3.04□□□□□ -1.92
CALD1-216ENST00000473714 CYB5D2Q8WUJ1 264 aa3.04□□□□□ -1.92
CALD1-216ENST00000473714 LEO1Q8WVC0 666 aaPredicted RBP3.04□□□□□ -1.92
CALD1-216ENST00000473714 FGD4Q96M96 766 aa3.04□□□□□ -1.92
CALD1-216ENST00000473714 ASB2Q96Q27 587 aa3.04□□□□□ -1.92
CALD1-216ENST00000473714 AARSD1Q9BTE6 412 aaKnown RBP3.04□□□□□ -1.92
CALD1-216ENST00000473714 ZNF747Q9BV97 191 aa3.04□□□□□ -1.92
CALD1-216ENST00000473714 GLIS2Q9BZE0 524 aaPredicted RBP3.04□□□□□ -1.92
CALD1-216ENST00000473714 SUCOQ9UBS9 1254 aaKnown RBP3.04□□□□□ -1.92
CALD1-216ENST00000473714 AKT3Q9Y243 479 aa3.04□□□□□ -1.92
CALD1-216ENST00000473714 FAN1Q9Y2M0 1017 aa3.04□□□□□ -1.92
CALD1-216ENST00000473714 ATP8A1Q9Y2Q0 1164 aa3.04□□□□□ -1.92
CALD1-216ENST00000473714 TSC22D4Q9Y3Q8 395 aa3.04□□□□□ -1.92
CALD1-216ENST00000473714 ANKRD31Q8N7Z5 1873 aa3.03□□□□□ -1.92
CALD1-216ENST00000473714 NUP155O75694 1391 aa3.03□□□□□ -1.92
CALD1-216ENST00000473714 ZNF318Q5VUA4 2279 aa3.03□□□□□ -1.92
CALD1-216ENST00000473714 RGPD2P0DJD1 1756 aa3.03□□□□□ -1.92
CALD1-216ENST00000473714 BCORQ6W2J9 1755 aa3.03□□□□□ -1.92
CALD1-216ENST00000473714 BDP1A6H8Y1 2624 aa3.03□□□□□ -1.92
CALD1-216ENST00000473714 COL11A2P13942 1736 aaPredicted RBP3.03□□□□□ -1.92
CALD1-216ENST00000473714 A0A1W2PQU0 124 aa3.03□□□□□ -1.92
CALD1-216ENST00000473714 ALG1L2C9J202 215 aa3.03□□□□□ -1.92
CALD1-216ENST00000473714 H0YIN7 160 aa3.03□□□□□ -1.92
CALD1-216ENST00000473714 SMIM22K7EJ46 135 aa3.03□□□□□ -1.92
CALD1-216ENST00000473714 RGS13O14921 159 aa3.03□□□□□ -1.92
CALD1-216ENST00000473714 PLATP00750 562 aa3.03□□□□□ -1.92
CALD1-216ENST00000473714 EPHX1P07099 455 aa3.03□□□□□ -1.92
CALD1-216ENST00000473714 ITGA4P13612 1032 aa3.03□□□□□ -1.92
CALD1-216ENST00000473714 PRKCAP17252 672 aa3.03□□□□□ -1.92
CALD1-216ENST00000473714 FBLN1P23142 703 aa3.03□□□□□ -1.92
CALD1-216ENST00000473714 TM4SF1P30408 202 aa3.03□□□□□ -1.92
CALD1-216ENST00000473714 RFC4P35249 363 aa3.03□□□□□ -1.92
CALD1-216ENST00000473714 PCBP3P57721 371 aaKnown RBP3.03□□□□□ -1.92
CALD1-216ENST00000473714 RNF4P78317 190 aa3.03□□□□□ -1.92
CALD1-216ENST00000473714 FOXO4P98177 505 aa3.03□□□□□ -1.92
CALD1-216ENST00000473714 ZNF200P98182 395 aaPredicted RBP3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms